|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at ch1:2755448..2756583+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_001085-T1 ID=KJC3_001085-T1|Name=KJC3_001085-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1136bp|location=Sequence derived from alignment at ch1:2755448..2756583+ (Aspergillus niger KJC3)
ATGCCCAACGGTTACCATGTGTATGTCACCTCACGGATAACTTCTCATGG
CTTTGAGGGACAACAGTATATACCTGCGGGTAACTTCCCGTCATTTCAGC
ATGTGTCTCATAACCACCACTTTTCACATATGACCCATCCAGGATACCAA
GTACATCATGGCTCCCCCTTGCAGCAGGTGCTCAAGCGATCGGGTCCCTC
TTGGGTGACTATCCCTCCGCAGTCGTCCCTACAGGGTTCAGTTCAAGCCC
AGGCGGGACCGAGTCAAGGCAACGTTGCCAACAATCCACGTGAACCGGAA
CAGCCTGAATCACAGTCCAGAGAATTGTCACCACTTGAGAGTGGTCATGA
CATCGTGTGTGATGTTTTAATCGTCGGAGAAATAGAAGTCACAGACGAAA
ACGCTCAAGATCTCCTTCCCCTCGAAGCTCGCCTTTTTGTTGGAAAGTAA
GAGATAGTCACCCTTCCAGACTCAATAGCGGATGGGATGAAAACTAACAC
ACTGCAGTATACCAAGTGCTCTTTGTCCAACTCAGATAAAGTTCGAGCTC
AAGAGGATCCTTGCCAGATATGGATGTTGTTATGTCAAAGTGAAGACGAA
CCCTAATTCTGGTTTGAGAACCGCCTTTGCGCAATTCGAGGTATGCGTAA
TGATTCATGTCCCAATGTGTAGCAACTAATGAAGTGTAGACACCGGAGGT
TGCGAACAGAGTCATGCAAAAGAGCAAGGATCAGCCATCAGAATTCGATC
TTCACCACCGCTCTCTCCGGTTCGAGATGGCGAAAGGGAAAAGGGAGATT
TCCACTCGCACACGTTCCCGTGAAGTTTTCTCTCAACCAGACCCTTGCAC
CACACGAGTGGATAATATTGAGGGTAGGGTCGAGCCCGCCCAAGAAATGA
ACGGCGAGGGTAGGGTCGAGCCCGCCCATAACATGAATGCCGAGGGCAAC
GTCGAGCCCACCCACAGAATCAACGGCGAGGGCAGAGTTGAGCCCCCGCA
AGACAATAGGGAAGTGGTCTCCGAAAGCGGCAAGTCTGCTGGGGAAACCC
GTGAGAGTTTCTATAATGTAGGGGCCAGAGGCAGCCACTCAGCTCCGTGC
CTACCTCTCGTGTGGGAAGCCTCTGCAACGGCCTGA back to topCoding sequence (CDS) from alignment at ch1:2755448..2756583+ >KJC3_001085-T1 ID=KJC3_001085-T1|Name=KJC3_001085-T1|organism=Aspergillus niger KJC3|type=CDS|length=3078bp|location=Sequence derived from alignment at ch1:2755448..2756583+ (Aspergillus niger KJC3)
ATGCCCAACGGTTACCATGTGTATGTCACCTCACGGATAACTTCTCATGG
CTTTGAGGGACAACAGTATATACCTGCGGGTAACTTCCCGTCATTTCAGC
ATGTGTCTCATAACCACCACTTTTCACATATGACCCATCCAGGATACCAA
GTACATCATGGCTCCCCCTTGCAGCAGGTGCTCAAGCGATCGGGTCCCTC
TTGGGTGACTATCCCTCCGCAGTCGTCCCTACAGGGTTCAGTTCAAGCCC
AGGCGGGACCGAGTCAAGGCAACGTTGCCAACAATCCACGTGAACCGGAA
CAGCCTGAATCACAGTCCAGAGAATTGTCACCACTTGAGAGTGGTCATGA
CATCGTGTGTGATGTTTTAATCGTCGGAGAAATAGAAGTCACAGACGAAA
ACGCTCAAGATCTCCTTCCCCTCGAAGCTCGCCTTTTTGTTGGAAATATA
CCAAGTGCTCTTTGTCCAACTCAGATAAAGTTCGAGCTCAAGAGGATCCT
TGCCAGATATGGATGTTGTTATGTCAAAGTGAAGACGAACCCTAATTCTG
GTTTGAGAACCGCCTTTGCGCAATTCGAGACACCGGAGGTTGCGAACAGA
GTCATGCAAAAGAGCAAGGATCAGCCATCAGAATTCGATCTTCACCACCG
CTCTCTCCGGTTCGAGATGGCGAAAGGGAAAAGGGAGATTTCCACTCGCA
CACGTTCCCGTGAAGTTTTCTCTCAACCAGACCCTTGCACCACACGAGTG
GATAATATTGAGGGTAGGGTCGAGCCCGCCCAAGAAATGAACGGCGAGGG
TAGGGTCGAGCCCGCCCATAACATGAATGCCGAGGGCAACGTCGAGCCCA
CCCACAGAATCAACGGCGAGGGCAGAGTTGAGCCCCCGCAAGACAATAGG
GAAGTGGTCTCCGAAAGCGGCAAGTCTGCTGGGGAAACCCGTGAGAGTTT
CTATAATGTAGGGGCCAGAGGCAGCCACTCAGCTCCGTGCCTACCTCTCG
TGTGGGAAGCCTCTGCAACGGCCTGAATGCCCAACGGTTACCATGTGTAT
GTCACCTCACGGATAACTTCTCATGGCTTTGAGGGACAACAGTATATACC
TGCGGGTAACTTCCCGTCATTTCAGCATGTGTCTCATAACCACCACTTTT
CACATATGACCCATCCAGGATACCAAGTACATCATGGCTCCCCCTTGCAG
CAGGTGCTCAAGCGATCGGGTCCCTCTTGGGTGACTATCCCTCCGCAGTC
GTCCCTACAGGGTTCAGTTCAAGCCCAGGCGGGACCGAGTCAAGGCAACG
TTGCCAACAATCCACGTGAACCGGAACAGCCTGAATCACAGTCCAGAGAA
TTGTCACCACTTGAGAGTGGTCATGACATCGTGTGTGATGTTTTAATCGT
CGGAGAAATAGAAGTCACAGACGAAAACGCTCAAGATCTCCTTCCCCTCG
AAGCTCGCCTTTTTGTTGGAAATATACCAAGTGCTCTTTGTCCAACTCAG
ATAAAGTTCGAGCTCAAGAGGATCCTTGCCAGATATGGATGTTGTTATGT
CAAAGTGAAGACGAACCCTAATTCTGGTTTGAGAACCGCCTTTGCGCAAT
TCGAGACACCGGAGGTTGCGAACAGAGTCATGCAAAAGAGCAAGGATCAG
CCATCAGAATTCGATCTTCACCACCGCTCTCTCCGGTTCGAGATGGCGAA
AGGGAAAAGGGAGATTTCCACTCGCACACGTTCCCGTGAAGTTTTCTCTC
AACCAGACCCTTGCACCACACGAGTGGATAATATTGAGGGTAGGGTCGAG
CCCGCCCAAGAAATGAACGGCGAGGGTAGGGTCGAGCCCGCCCATAACAT
GAATGCCGAGGGCAACGTCGAGCCCACCCACAGAATCAACGGCGAGGGCA
GAGTTGAGCCCCCGCAAGACAATAGGGAAGTGGTCTCCGAAAGCGGCAAG
TCTGCTGGGGAAACCCGTGAGAGTTTCTATAATGTAGGGGCCAGAGGCAG
CCACTCAGCTCCGTGCCTACCTCTCGTGTGGGAAGCCTCTGCAACGGCCT
GAATGCCCAACGGTTACCATGTGTATGTCACCTCACGGATAACTTCTCAT
GGCTTTGAGGGACAACAGTATATACCTGCGGGTAACTTCCCGTCATTTCA
GCATGTGTCTCATAACCACCACTTTTCACATATGACCCATCCAGGATACC
AAGTACATCATGGCTCCCCCTTGCAGCAGGTGCTCAAGCGATCGGGTCCC
TCTTGGGTGACTATCCCTCCGCAGTCGTCCCTACAGGGTTCAGTTCAAGC
CCAGGCGGGACCGAGTCAAGGCAACGTTGCCAACAATCCACGTGAACCGG
AACAGCCTGAATCACAGTCCAGAGAATTGTCACCACTTGAGAGTGGTCAT
GACATCGTGTGTGATGTTTTAATCGTCGGAGAAATAGAAGTCACAGACGA
AAACGCTCAAGATCTCCTTCCCCTCGAAGCTCGCCTTTTTGTTGGAAATA
TACCAAGTGCTCTTTGTCCAACTCAGATAAAGTTCGAGCTCAAGAGGATC
CTTGCCAGATATGGATGTTGTTATGTCAAAGTGAAGACGAACCCTAATTC
TGGTTTGAGAACCGCCTTTGCGCAATTCGAGACACCGGAGGTTGCGAACA
GAGTCATGCAAAAGAGCAAGGATCAGCCATCAGAATTCGATCTTCACCAC
CGCTCTCTCCGGTTCGAGATGGCGAAAGGGAAAAGGGAGATTTCCACTCG
CACACGTTCCCGTGAAGTTTTCTCTCAACCAGACCCTTGCACCACACGAG
TGGATAATATTGAGGGTAGGGTCGAGCCCGCCCAAGAAATGAACGGCGAG
GGTAGGGTCGAGCCCGCCCATAACATGAATGCCGAGGGCAACGTCGAGCC
CACCCACAGAATCAACGGCGAGGGCAGAGTTGAGCCCCCGCAAGACAATA
GGGAAGTGGTCTCCGAAAGCGGCAAGTCTGCTGGGGAAACCCGTGAGAGT
TTCTATAATGTAGGGGCCAGAGGCAGCCACTCAGCTCCGTGCCTACCTCT
CGTGTGGGAAGCCTCTGCAACGGCCTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003676 | nucleic acid binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR035979 |
| DBxref | InterPro:IPR012677 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch1 | supercontig | ch1:2755448..2756583 + |
|
