You are here

Home

KJC3_001087-T2, KJC3_001087-T2 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_001087-T2
Unique NameKJC3_001087-T2
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch1:2759982..2761622+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_001087-T2 ID=KJC3_001087-T2|Name=KJC3_001087-T2|organism=Aspergillus niger KJC3|type=mRNA|length=1641bp|location=Sequence derived from alignment at ch1:2759982..2761622+ (Aspergillus niger KJC3)
TATTGCTCGAATTCAGCAGTTGTATCACTCTGAGCTAACCTGAGGGCACC
GAAGATGCTTCAGCTTAAACCCAGACTCACCCCAGGCGTCTTCTGTCACT
CTAACATTCAGAATATACACCATCCAACAACATGGCCCCTTCTGTCCTTC
TGTCGAGCCCGGCTCCAACGTCTACCTCAAAAGCATCGCTGACGGAGCAG
GTCCAATTGTCGCCTCCGCTCCCCAATCCCTCTCTCCAGATTACAGCGGA
TCACAATCTCAAATTTGTCCCCGCCCCGGTGTATGCGCCACAGCGAGGTG
AGGTCCTGCTGCAAATCAAAGCCACTGGCGTCTGTGGGTATGCATGAACA
TAGGCTAGATTATCTGAGTACACTACTCGCTAACCCGACCAGGTCCGATA
TCCATTTCTGGAAAACTGGTCGCATTGGGGAGCTGGTCTTCGAAGGGGAT
TGCATAATTGGCCATGAAGCAGCGGGGGTGGTGCTGAAGTGTGGCGATGG
AGTGACCCATCTGCAGCCTGGTTAGTAACGCTGTGTGCCATGTCTGCAAT
GGATAGCTTATGGGGAGGCACAGGTGACAGAGTCGCCGTCGAGCCTGGGG
TTCCGTGCGAACATTGCTTCCTCTGTGACGACGGTCGCTACAACCTTTGC
GAGGACGTCCAGTTTGCGGGAGTATATCCTTATGCGGGTACCATCCAACG
TTACAAGGTGCACCCGGCCAAATGGTTACACAAGTGCGTGTGCCCATTGC
TTAGACTTATGGGATCAAGTCATGCTGAACGTGCTCTACAGGCTTCCGGA
CAATATCTCCTATCTTGAAGGAGCTCTCCTCGAGCCACTTTCGGTCGTCA
TGCGCGGTATTCAGGTCGCCCGCCTTCATTTAGGTCGCGCTGTTGTTGTC
TGCGGCGCCGGGCCTATTGGACTGATCGCCCTCGCAGCTGCTCGGGCATC
AGGGGCCCACCCCATTGTCATCACAGATATTGAGCCAAAACGACTCGCCT
TTGCCAAGGAATTTGCGCCTTGGTGCAATACATACCAGGTTAATCCGGCA
CTAGATGCGGAAGGCAACGCTAAGGCAATCCGAGCACTTTTTGGTCCGGA
CGAGTACAACGCCCCAGAAACTGTATTAGAGTGTACTGGTGTTGAGAACA
GTGTGTGTACCGCAGCATTCACCGCTCGTCGAGGTGGTGCGGTGGTGGTT
ATCGGCGTTGGAAAAGCAGTGATGAATAATTTGCCATTCATGCATATTTC
TCTGGCAGAAGTAGGCACGCACTTGTCCTGTTAAGCATGAAGAAGAGACG
ACTAACCAAGACAGATCGATTTGCGGTTTATCAACCGGTACCGTGATACA
TGGCCGCCTGCGATTGCGTGTCTCACTGGGGGCATACTGGACCTGAAGAA
GTTGGTGTCGCATGTTTTCCCACTAGAAAAGGCAGTGGATGCCTTGAATC
TGTGTGCGGATCCCAGAAACGGGAGCATCAAGGTGACCATTGTGGATGAG
GTTGAAGCAACGCTGTAAATACTTGCCGAATACAGTTTGGCCGGGGCGGA
GGCAGATAGAGAAGACTAAACGAGACACCTCCCCAGTAGCTATTTCCTCA
ATCGAGAGTCGGCAAGCATCTCACTACTCAACAGCGTTGAC
back to top

Coding sequence (CDS) from alignment at ch1:2759982..2761622+

>KJC3_001087-T2 ID=KJC3_001087-T2|Name=KJC3_001087-T2|organism=Aspergillus niger KJC3|type=CDS|length=3948bp|location=Sequence derived from alignment at ch1:2759982..2761622+ (Aspergillus niger KJC3)
ATGGCCCCTTCTGTCCTTCTGTCGAGCCCGGCTCCAACGTCTACCTCAAA
AGCATCGCTGACGGAGCAGGTCCAATTGTCGCCTCCGCTCCCCAATCCCT
CTCTCCAGATTACAGCGGATCACAATCTCAAATTTGTCCCCGCCCCGGTG
TATGCGCCACAGCGAGGTGAGGTCCTGCTGCAAATCAAAGCCACTGGCGT
CTGTGGGTCCGATATCCATTTCTGGAAAACTGGTCGCATTGGGGAGCTGG
TCTTCGAAGGGGATTGCATAATTGGCCATGAAGCAGCGGGGGTGGTGCTG
AAGTGTGGCGATGGAGTGACCCATCTGCAGCCTGGTGACAGAGTCGCCGT
CGAGCCTGGGGTTCCGTGCGAACATTGCTTCCTCTGTGACGACGGTCGCT
ACAACCTTTGCGAGGACGTCCAGTTTGCGGGAGTATATCCTTATGCGGGT
ACCATCCAACGTTACAAGGTGCACCCGGCCAAATGGTTACACAAGCTTCC
GGACAATATCTCCTATCTTGAAGGAGCTCTCCTCGAGCCACTTTCGGTCG
TCATGCGCGGTATTCAGGTCGCCCGCCTTCATTTAGGTCGCGCTGTTGTT
GTCTGCGGCGCCGGGCCTATTGGACTGATCGCCCTCGCAGCTGCTCGGGC
ATCAGGGGCCCACCCCATTGTCATCACAGATATTGAGCCAAAACGACTCG
CCTTTGCCAAGGAATTTGCGCCTTGGTGCAATACATACCAGGTTAATCCG
GCACTAGATGCGGAAGGCAACGCTAAGGCAATCCGAGCACTTTTTGGTCC
GGACGAGTACAACGCCCCAGAAACTGTATTAGAGTGTACTGGTGTTGAGA
ACAGTGTGTGTACCGCAGCATTCACCGCTCGTCGAGGTGGTGCGGTGGTG
GTTATCGGCGTTGGAAAAGCAGTGATGAATAATTTGCCATTCATGCATAT
TTCTCTGGCAGAAGTAGGCACGCACTTGTCCTGTTAAATGGCCCCTTCTG
TCCTTCTGTCGAGCCCGGCTCCAACGTCTACCTCAAAAGCATCGCTGACG
GAGCAGGTCCAATTGTCGCCTCCGCTCCCCAATCCCTCTCTCCAGATTAC
AGCGGATCACAATCTCAAATTTGTCCCCGCCCCGGTGTATGCGCCACAGC
GAGGTGAGGTCCTGCTGCAAATCAAAGCCACTGGCGTCTGTGGGTCCGAT
ATCCATTTCTGGAAAACTGGTCGCATTGGGGAGCTGGTCTTCGAAGGGGA
TTGCATAATTGGCCATGAAGCAGCGGGGGTGGTGCTGAAGTGTGGCGATG
GAGTGACCCATCTGCAGCCTGGTGACAGAGTCGCCGTCGAGCCTGGGGTT
CCGTGCGAACATTGCTTCCTCTGTGACGACGGTCGCTACAACCTTTGCGA
GGACGTCCAGTTTGCGGGAGTATATCCTTATGCGGGTACCATCCAACGTT
ACAAGGTGCACCCGGCCAAATGGTTACACAAGCTTCCGGACAATATCTCC
TATCTTGAAGGAGCTCTCCTCGAGCCACTTTCGGTCGTCATGCGCGGTAT
TCAGGTCGCCCGCCTTCATTTAGGTCGCGCTGTTGTTGTCTGCGGCGCCG
GGCCTATTGGACTGATCGCCCTCGCAGCTGCTCGGGCATCAGGGGCCCAC
CCCATTGTCATCACAGATATTGAGCCAAAACGACTCGCCTTTGCCAAGGA
ATTTGCGCCTTGGTGCAATACATACCAGGTTAATCCGGCACTAGATGCGG
AAGGCAACGCTAAGGCAATCCGAGCACTTTTTGGTCCGGACGAGTACAAC
GCCCCAGAAACTGTATTAGAGTGTACTGGTGTTGAGAACAGTGTGTGTAC
CGCAGCATTCACCGCTCGTCGAGGTGGTGCGGTGGTGGTTATCGGCGTTG
GAAAAGCAGTGATGAATAATTTGCCATTCATGCATATTTCTCTGGCAGAA
GTAGGCACGCACTTGTCCTGTTAAATGGCCCCTTCTGTCCTTCTGTCGAG
CCCGGCTCCAACGTCTACCTCAAAAGCATCGCTGACGGAGCAGGTCCAAT
TGTCGCCTCCGCTCCCCAATCCCTCTCTCCAGATTACAGCGGATCACAAT
CTCAAATTTGTCCCCGCCCCGGTGTATGCGCCACAGCGAGGTGAGGTCCT
GCTGCAAATCAAAGCCACTGGCGTCTGTGGGTCCGATATCCATTTCTGGA
AAACTGGTCGCATTGGGGAGCTGGTCTTCGAAGGGGATTGCATAATTGGC
CATGAAGCAGCGGGGGTGGTGCTGAAGTGTGGCGATGGAGTGACCCATCT
GCAGCCTGGTGACAGAGTCGCCGTCGAGCCTGGGGTTCCGTGCGAACATT
GCTTCCTCTGTGACGACGGTCGCTACAACCTTTGCGAGGACGTCCAGTTT
GCGGGAGTATATCCTTATGCGGGTACCATCCAACGTTACAAGGTGCACCC
GGCCAAATGGTTACACAAGCTTCCGGACAATATCTCCTATCTTGAAGGAG
CTCTCCTCGAGCCACTTTCGGTCGTCATGCGCGGTATTCAGGTCGCCCGC
CTTCATTTAGGTCGCGCTGTTGTTGTCTGCGGCGCCGGGCCTATTGGACT
GATCGCCCTCGCAGCTGCTCGGGCATCAGGGGCCCACCCCATTGTCATCA
CAGATATTGAGCCAAAACGACTCGCCTTTGCCAAGGAATTTGCGCCTTGG
TGCAATACATACCAGGTTAATCCGGCACTAGATGCGGAAGGCAACGCTAA
GGCAATCCGAGCACTTTTTGGTCCGGACGAGTACAACGCCCCAGAAACTG
TATTAGAGTGTACTGGTGTTGAGAACAGTGTGTGTACCGCAGCATTCACC
GCTCGTCGAGGTGGTGCGGTGGTGGTTATCGGCGTTGGAAAAGCAGTGAT
GAATAATTTGCCATTCATGCATATTTCTCTGGCAGAAGTAGGCACGCACT
TGTCCTGTTAAATGGCCCCTTCTGTCCTTCTGTCGAGCCCGGCTCCAACG
TCTACCTCAAAAGCATCGCTGACGGAGCAGGTCCAATTGTCGCCTCCGCT
CCCCAATCCCTCTCTCCAGATTACAGCGGATCACAATCTCAAATTTGTCC
CCGCCCCGGTGTATGCGCCACAGCGAGGTGAGGTCCTGCTGCAAATCAAA
GCCACTGGCGTCTGTGGGTCCGATATCCATTTCTGGAAAACTGGTCGCAT
TGGGGAGCTGGTCTTCGAAGGGGATTGCATAATTGGCCATGAAGCAGCGG
GGGTGGTGCTGAAGTGTGGCGATGGAGTGACCCATCTGCAGCCTGGTGAC
AGAGTCGCCGTCGAGCCTGGGGTTCCGTGCGAACATTGCTTCCTCTGTGA
CGACGGTCGCTACAACCTTTGCGAGGACGTCCAGTTTGCGGGAGTATATC
CTTATGCGGGTACCATCCAACGTTACAAGGTGCACCCGGCCAAATGGTTA
CACAAGCTTCCGGACAATATCTCCTATCTTGAAGGAGCTCTCCTCGAGCC
ACTTTCGGTCGTCATGCGCGGTATTCAGGTCGCCCGCCTTCATTTAGGTC
GCGCTGTTGTTGTCTGCGGCGCCGGGCCTATTGGACTGATCGCCCTCGCA
GCTGCTCGGGCATCAGGGGCCCACCCCATTGTCATCACAGATATTGAGCC
AAAACGACTCGCCTTTGCCAAGGAATTTGCGCCTTGGTGCAATACATACC
AGGTTAATCCGGCACTAGATGCGGAAGGCAACGCTAAGGCAATCCGAGCA
CTTTTTGGTCCGGACGAGTACAACGCCCCAGAAACTGTATTAGAGTGTAC
TGGTGTTGAGAACAGTGTGTGTACCGCAGCATTCACCGCTCGTCGAGGTG
GTGCGGTGGTGGTTATCGGCGTTGGAAAAGCAGTGATGAATAATTTGCCA
TTCATGCATATTTCTCTGGCAGAAGTAGGCACGCACTTGTCCTGTTAA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0016491oxidoreductase activity
GO:0008270zinc ion binding
Vocabulary: Biological Process
TermDefinition
GO:0055114oxidation-reduction process
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_001087KJC3_001087Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001087-T2KJC3_001087-T2-proteinAspergillus niger KJC3polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001087-T2.utr5p1KJC3_001087-T2.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001087-T2.exon1KJC3_001087-T2.exon1Aspergillus niger KJC3exon
KJC3_001087-T2.exon2KJC3_001087-T2.exon2Aspergillus niger KJC3exon
KJC3_001087-T2.exon3KJC3_001087-T2.exon3Aspergillus niger KJC3exon
KJC3_001087-T2.exon4KJC3_001087-T2.exon4Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001087-T2.cdsKJC3_001087-T2.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001087-T2.utr3p1KJC3_001087-T2.utr3p1Aspergillus niger KJC3three_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR011032
DBxrefInterPro:IPR036291
DBxrefInterPro:IPR002328
DBxrefInterPro:IPR013154
DBxrefInterPro:IPR013149
DBxrefPFAM:PF00107
DBxrefPFAM:PF08240
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch1supercontigch1:2759982..2761622 +
Powered by Drupal