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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch1:2763102..2765812+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_001088-T1 ID=KJC3_001088-T1|Name=KJC3_001088-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2711bp|location=Sequence derived from alignment at ch1:2763102..2765812+ (Aspergillus niger KJC3)
TTCGTATTATGGCCTCAGGCTCACTTTGATACTAAACACCTCATCTTTTC
TCCAGGGACTTAAAACAAACTCTGGTAGTGGAAATTTCATCACCCTCATT
TTTAGCTCCTTTCTGAAGTCTGAACCCCTTCTGACCCTGTCACACCATGA
TCCTTGGGCTCGAGAAGAAATGCGAGGGCGAGAAAGCTGATTGCACGAGG
AGCTGACGTGGACGGGGACCAACTCCACCGGTGCCGATGGTTGGCTTTTT
GGGCCTTTCTTCCCTTCTTTTTCCCGTCGATTAAAAATAGGCCTGGCCCG
GCGTCTACGCAGCTTGATTTGAAGCAAACCCCCATCCACCTCTCTTGGTT
TCTGCTGCAATGCCATCATCTCATTCTTGACTTGACTGCCACTGTCTCCA
TCCGTATTCCCCCCTTCACTCTCGTTTACTCTCCGTTCCTGCTGGTCAGT
CTCTTCCTTGACCGTGTCCCTCGCTTCCAACACTCGTTTCCTTCAATTTC
CTCCCCCCTTTTCTCTCGTTGCCCCCCTCCTCCCGCTCCCTCCCGCCATG
CGTCTCGTTCGAGATTGCCTGTATGGGGGGTTATTCCTTAACACGGCGCT
CTTCTCCCAGCTCTCCCACGCCATCGATATCGATATCAGCAGTACCAGTA
TGCCTTCCCCCCACTTCTTCAATCTCTTTCCCATTATATACACCACTGTC
TCGGCCCTTGCTTTATTCCGTCATCCTTCTCCTCTCCTACATACTTGGAC
GCAGTTGCGCCACTATATCTAAGACTCCATGCCTTCCATTCCAACGACAT
ACATAAATACCATGAATTGACAACTGATACACATTTTTATTGTCCGTATA
GGTTCAATTAAAGATGCCGCCAGTAAGACGGCCTACGGGTCCATGACCTG
GTATCATGGAAACGAAACCGGTCAGATTCCCGGTGCTTTCCCTAGCAAGT
GGTGGGAGGGTAGCGCGCTTTTCACAAGTTTGCTCCTCTACTGGTATTAC
ACTGGAGACAGTACCTACAACGACGAGGTCCGTCAGGGTATGCAATGGCA
GGCGGGTGACTGCGATTACATGCCCGCCAATTACAGTAGTTACCTGGTAA
GTGACCTGACCACACCCATCCCCCCTGAACTTGGACAATAGTCTGACTCT
CGTCGCTGTTCACTAGGGTAACGACGATCAAATGTTCTGGGGTCTTGCCG
CCATCACCGCTGCCGAGATCGAATTCGCCGACAGCTCCTCCGGATATTCC
TGGCTCGCTTTGGCCCAGGGTGTTTACAACACTCAGATCGACCGATGGGA
TGATTCGACATGTGGCGGCGGTTTGCGCTGGCAGATCTACCCTTACGAGG
CCGGTTACGCCATGAAGAACTCCATCTCGAACGGAGGTTTGTTCCAACTC
GCCGCCCGCCTGGCCCGCTACACCTCAAACGACACATACGCCGACTGGGC
AGAGAAGATCTTCGATTGGTGTGCCTCGACTCCGTTGCTAAACAACGAGA
CTTGGAACGTGGCCGACTCCACCGATGTCGATAACAGCTGCTCCACCCAA
GGCAACAACCAGTGGTCTTACAACTACGGCGTGTTCTTGACGGGAGCCGC
GTACATGTACAACTATGTGAGTGATTCCGACCCCCTTGAGGTACGAAGGA
AACATGTGCTGATTTGACGCCATTCACAGACCGGCAAGGCCAAGTGGAAG
ACTGCGGCGGAGGGCCTCTTGAACGTCACGCTCGACACCTTTTTCCCGGC
GAAGTATGGTGGAAACATCATGTCCGAAATTCTCTGTGAGCCGACCGAAG
TGTGCAATGACAACGAAATTCTGTTCAAGGGTCTCGTCACCGGATGGCTT
GGACTTGTGGCCCTAGTGATGCCGTCGACGTATGATAGCATTTTGCCAAA
GCTGCAGGGGTCTGCCGAAGCTGCCGCAGCCTCCTGCAGCGGAATGAGCA
ACAACACTTGTGGTGTGCGCTGGTGGCCCAAGAAGTGGGATGGATGGAAC
GGAATGGAGGAGGAAATCGCCGTCACCAACGTTCTATCCTCCGCGTTGGT
CAACACGAAGAAAACCGCCCCTGTGACCTCCAGCACCGGAGGCAATAGTA
GTAGTGATCCGAACGCAGGTACGGGCGACAACACCGGGAGCAGCGGCAGT
ACCGAATCGAAGATCACCACGGGCGACAAGGCGGGTGCCTCCATCCTGAC
CATTGCCTTTGTGGGCATGTGGGGAGGTATGATCGCTTGGATGGTCATTG
GCGGTTGAAATATACCACCAACCTACAAAGTCTTGTGATTTGTCTGTCTA
TAGTGATTCGGTTCATATGGCTGGGCGATTCCCCCTTTGTCCTTGCTATG
TTTTTTGATTTGGGCGATTTCGGAAAGGCGCAATGTGTCTATAGGTCTAC
TACATTTTGTGAATGCCTTCTCTCATGCATGTATATAATCTAGATAAGTT
GGTTTGGACTGGACTGGTTGGCCTGGGTACGTGTCAGGTTCCCTGTACTT
GATATTCTTCGTTCACGTGACTTATTCTCCGAAAACATACACATTGATTA
TTGTTGAAACAAGCATGTCCTGTGAATTATCCAAAGACATCTTTCTGAGA
AGGAAGCACCTGTTCACTAGTTTCACTAATTCTGAGTGAAAGACCCATGG
AGGATGTTGCTATACTTCTCGTACTATATCTATTTATACATTAATTTCTA
CAATCATAGCA back to topCoding sequence (CDS) from alignment at ch1:2763102..2765812+ >KJC3_001088-T1 ID=KJC3_001088-T1|Name=KJC3_001088-T1|organism=Aspergillus niger KJC3|type=CDS|length=5496bp|location=Sequence derived from alignment at ch1:2763102..2765812+ (Aspergillus niger KJC3)
ATGCGTCTCGTTCGAGATTGCCTGTATGGGGGGTTATTCCTTAACACGGC
GCTCTTCTCCCAGCTCTCCCACGCCATCGATATCGATATCAGCAGTACCA
GTTCAATTAAAGATGCCGCCAGTAAGACGGCCTACGGGTCCATGACCTGG
TATCATGGAAACGAAACCGGTCAGATTCCCGGTGCTTTCCCTAGCAAGTG
GTGGGAGGGTAGCGCGCTTTTCACAAGTTTGCTCCTCTACTGGTATTACA
CTGGAGACAGTACCTACAACGACGAGGTCCGTCAGGGTATGCAATGGCAG
GCGGGTGACTGCGATTACATGCCCGCCAATTACAGTAGTTACCTGGGTAA
CGACGATCAAATGTTCTGGGGTCTTGCCGCCATCACCGCTGCCGAGATCG
AATTCGCCGACAGCTCCTCCGGATATTCCTGGCTCGCTTTGGCCCAGGGT
GTTTACAACACTCAGATCGACCGATGGGATGATTCGACATGTGGCGGCGG
TTTGCGCTGGCAGATCTACCCTTACGAGGCCGGTTACGCCATGAAGAACT
CCATCTCGAACGGAGGTTTGTTCCAACTCGCCGCCCGCCTGGCCCGCTAC
ACCTCAAACGACACATACGCCGACTGGGCAGAGAAGATCTTCGATTGGTG
TGCCTCGACTCCGTTGCTAAACAACGAGACTTGGAACGTGGCCGACTCCA
CCGATGTCGATAACAGCTGCTCCACCCAAGGCAACAACCAGTGGTCTTAC
AACTACGGCGTGTTCTTGACGGGAGCCGCGTACATGTACAACTATACCGG
CAAGGCCAAGTGGAAGACTGCGGCGGAGGGCCTCTTGAACGTCACGCTCG
ACACCTTTTTCCCGGCGAAGTATGGTGGAAACATCATGTCCGAAATTCTC
TGTGAGCCGACCGAAGTGTGCAATGACAACGAAATTCTGTTCAAGGGTCT
CGTCACCGGATGGCTTGGACTTGTGGCCCTAGTGATGCCGTCGACGTATG
ATAGCATTTTGCCAAAGCTGCAGGGGTCTGCCGAAGCTGCCGCAGCCTCC
TGCAGCGGAATGAGCAACAACACTTGTGGTGTGCGCTGGTGGCCCAAGAA
GTGGGATGGATGGAACGGAATGGAGGAGGAAATCGCCGTCACCAACGTTC
TATCCTCCGCGTTGGTCAACACGAAGAAAACCGCCCCTGTGACCTCCAGC
ACCGGAGGCAATAGTAGTAGTGATCCGAACGCAGGTACGGGCGACAACAC
CGGGAGCAGCGGCAGTACCGAATCGAAGATCACCACGGGCGACAAGGCGG
GTGCCTCCATCCTGACCATTGCCTTTGTGGGCATGTGGGGAGGTATGATC
GCTTGGATGGTCATTGGCGGTTGAATGCGTCTCGTTCGAGATTGCCTGTA
TGGGGGGTTATTCCTTAACACGGCGCTCTTCTCCCAGCTCTCCCACGCCA
TCGATATCGATATCAGCAGTACCAGTTCAATTAAAGATGCCGCCAGTAAG
ACGGCCTACGGGTCCATGACCTGGTATCATGGAAACGAAACCGGTCAGAT
TCCCGGTGCTTTCCCTAGCAAGTGGTGGGAGGGTAGCGCGCTTTTCACAA
GTTTGCTCCTCTACTGGTATTACACTGGAGACAGTACCTACAACGACGAG
GTCCGTCAGGGTATGCAATGGCAGGCGGGTGACTGCGATTACATGCCCGC
CAATTACAGTAGTTACCTGGGTAACGACGATCAAATGTTCTGGGGTCTTG
CCGCCATCACCGCTGCCGAGATCGAATTCGCCGACAGCTCCTCCGGATAT
TCCTGGCTCGCTTTGGCCCAGGGTGTTTACAACACTCAGATCGACCGATG
GGATGATTCGACATGTGGCGGCGGTTTGCGCTGGCAGATCTACCCTTACG
AGGCCGGTTACGCCATGAAGAACTCCATCTCGAACGGAGGTTTGTTCCAA
CTCGCCGCCCGCCTGGCCCGCTACACCTCAAACGACACATACGCCGACTG
GGCAGAGAAGATCTTCGATTGGTGTGCCTCGACTCCGTTGCTAAACAACG
AGACTTGGAACGTGGCCGACTCCACCGATGTCGATAACAGCTGCTCCACC
CAAGGCAACAACCAGTGGTCTTACAACTACGGCGTGTTCTTGACGGGAGC
CGCGTACATGTACAACTATACCGGCAAGGCCAAGTGGAAGACTGCGGCGG
AGGGCCTCTTGAACGTCACGCTCGACACCTTTTTCCCGGCGAAGTATGGT
GGAAACATCATGTCCGAAATTCTCTGTGAGCCGACCGAAGTGTGCAATGA
CAACGAAATTCTGTTCAAGGGTCTCGTCACCGGATGGCTTGGACTTGTGG
CCCTAGTGATGCCGTCGACGTATGATAGCATTTTGCCAAAGCTGCAGGGG
TCTGCCGAAGCTGCCGCAGCCTCCTGCAGCGGAATGAGCAACAACACTTG
TGGTGTGCGCTGGTGGCCCAAGAAGTGGGATGGATGGAACGGAATGGAGG
AGGAAATCGCCGTCACCAACGTTCTATCCTCCGCGTTGGTCAACACGAAG
AAAACCGCCCCTGTGACCTCCAGCACCGGAGGCAATAGTAGTAGTGATCC
GAACGCAGGTACGGGCGACAACACCGGGAGCAGCGGCAGTACCGAATCGA
AGATCACCACGGGCGACAAGGCGGGTGCCTCCATCCTGACCATTGCCTTT
GTGGGCATGTGGGGAGGTATGATCGCTTGGATGGTCATTGGCGGTTGAAT
GCGTCTCGTTCGAGATTGCCTGTATGGGGGGTTATTCCTTAACACGGCGC
TCTTCTCCCAGCTCTCCCACGCCATCGATATCGATATCAGCAGTACCAGT
TCAATTAAAGATGCCGCCAGTAAGACGGCCTACGGGTCCATGACCTGGTA
TCATGGAAACGAAACCGGTCAGATTCCCGGTGCTTTCCCTAGCAAGTGGT
GGGAGGGTAGCGCGCTTTTCACAAGTTTGCTCCTCTACTGGTATTACACT
GGAGACAGTACCTACAACGACGAGGTCCGTCAGGGTATGCAATGGCAGGC
GGGTGACTGCGATTACATGCCCGCCAATTACAGTAGTTACCTGGGTAACG
ACGATCAAATGTTCTGGGGTCTTGCCGCCATCACCGCTGCCGAGATCGAA
TTCGCCGACAGCTCCTCCGGATATTCCTGGCTCGCTTTGGCCCAGGGTGT
TTACAACACTCAGATCGACCGATGGGATGATTCGACATGTGGCGGCGGTT
TGCGCTGGCAGATCTACCCTTACGAGGCCGGTTACGCCATGAAGAACTCC
ATCTCGAACGGAGGTTTGTTCCAACTCGCCGCCCGCCTGGCCCGCTACAC
CTCAAACGACACATACGCCGACTGGGCAGAGAAGATCTTCGATTGGTGTG
CCTCGACTCCGTTGCTAAACAACGAGACTTGGAACGTGGCCGACTCCACC
GATGTCGATAACAGCTGCTCCACCCAAGGCAACAACCAGTGGTCTTACAA
CTACGGCGTGTTCTTGACGGGAGCCGCGTACATGTACAACTATACCGGCA
AGGCCAAGTGGAAGACTGCGGCGGAGGGCCTCTTGAACGTCACGCTCGAC
ACCTTTTTCCCGGCGAAGTATGGTGGAAACATCATGTCCGAAATTCTCTG
TGAGCCGACCGAAGTGTGCAATGACAACGAAATTCTGTTCAAGGGTCTCG
TCACCGGATGGCTTGGACTTGTGGCCCTAGTGATGCCGTCGACGTATGAT
AGCATTTTGCCAAAGCTGCAGGGGTCTGCCGAAGCTGCCGCAGCCTCCTG
CAGCGGAATGAGCAACAACACTTGTGGTGTGCGCTGGTGGCCCAAGAAGT
GGGATGGATGGAACGGAATGGAGGAGGAAATCGCCGTCACCAACGTTCTA
TCCTCCGCGTTGGTCAACACGAAGAAAACCGCCCCTGTGACCTCCAGCAC
CGGAGGCAATAGTAGTAGTGATCCGAACGCAGGTACGGGCGACAACACCG
GGAGCAGCGGCAGTACCGAATCGAAGATCACCACGGGCGACAAGGCGGGT
GCCTCCATCCTGACCATTGCCTTTGTGGGCATGTGGGGAGGTATGATCGC
TTGGATGGTCATTGGCGGTTGAATGCGTCTCGTTCGAGATTGCCTGTATG
GGGGGTTATTCCTTAACACGGCGCTCTTCTCCCAGCTCTCCCACGCCATC
GATATCGATATCAGCAGTACCAGTTCAATTAAAGATGCCGCCAGTAAGAC
GGCCTACGGGTCCATGACCTGGTATCATGGAAACGAAACCGGTCAGATTC
CCGGTGCTTTCCCTAGCAAGTGGTGGGAGGGTAGCGCGCTTTTCACAAGT
TTGCTCCTCTACTGGTATTACACTGGAGACAGTACCTACAACGACGAGGT
CCGTCAGGGTATGCAATGGCAGGCGGGTGACTGCGATTACATGCCCGCCA
ATTACAGTAGTTACCTGGGTAACGACGATCAAATGTTCTGGGGTCTTGCC
GCCATCACCGCTGCCGAGATCGAATTCGCCGACAGCTCCTCCGGATATTC
CTGGCTCGCTTTGGCCCAGGGTGTTTACAACACTCAGATCGACCGATGGG
ATGATTCGACATGTGGCGGCGGTTTGCGCTGGCAGATCTACCCTTACGAG
GCCGGTTACGCCATGAAGAACTCCATCTCGAACGGAGGTTTGTTCCAACT
CGCCGCCCGCCTGGCCCGCTACACCTCAAACGACACATACGCCGACTGGG
CAGAGAAGATCTTCGATTGGTGTGCCTCGACTCCGTTGCTAAACAACGAG
ACTTGGAACGTGGCCGACTCCACCGATGTCGATAACAGCTGCTCCACCCA
AGGCAACAACCAGTGGTCTTACAACTACGGCGTGTTCTTGACGGGAGCCG
CGTACATGTACAACTATACCGGCAAGGCCAAGTGGAAGACTGCGGCGGAG
GGCCTCTTGAACGTCACGCTCGACACCTTTTTCCCGGCGAAGTATGGTGG
AAACATCATGTCCGAAATTCTCTGTGAGCCGACCGAAGTGTGCAATGACA
ACGAAATTCTGTTCAAGGGTCTCGTCACCGGATGGCTTGGACTTGTGGCC
CTAGTGATGCCGTCGACGTATGATAGCATTTTGCCAAAGCTGCAGGGGTC
TGCCGAAGCTGCCGCAGCCTCCTGCAGCGGAATGAGCAACAACACTTGTG
GTGTGCGCTGGTGGCCCAAGAAGTGGGATGGATGGAACGGAATGGAGGAG
GAAATCGCCGTCACCAACGTTCTATCCTCCGCGTTGGTCAACACGAAGAA
AACCGCCCCTGTGACCTCCAGCACCGGAGGCAATAGTAGTAGTGATCCGA
ACGCAGGTACGGGCGACAACACCGGGAGCAGCGGCAGTACCGAATCGAAG
ATCACCACGGGCGACAAGGCGGGTGCCTCCATCCTGACCATTGCCTTTGT
GGGCATGTGGGGAGGTATGATCGCTTGGATGGTCATTGGCGGTTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0016052 | carbohydrate catabolic process |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003824 | catalytic activity |
| GO:0008496 | mannan endo-1,6-alpha-mannosidase activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_001088-T1.utr5p1 | KJC3_001088-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_001088-T1.utr3p1 | KJC3_001088-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| Note | CAZy:GH76 |
| DBxref | InterPro:IPR008928 |
| DBxref | InterPro:IPR014480 |
| DBxref | InterPro:IPR005198 |
| DBxref | PFAM:PF03663 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch1 | supercontig | ch1:2763102..2765812 + |
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