KJC3_001100-T1, KJC3_001100-T1 (mRNA) Aspergillus niger KJC3

Overview


Name	KJC3_001100-T1
Unique Name	KJC3_001100-T1
Type	mRNA
Organism	Aspergillus niger KJC3

Sequences

The following sequences are available for this feature:

mRNA from alignment at ch1:2792227..2794679-
coding sequence from alignment at ch1:2792227..2794679-

mRNA from alignment at ch1:2792227..2794679-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

>KJC3_001100-T1 ID=KJC3_001100-T1|Name=KJC3_001100-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2453bp|location=Sequence derived from alignment at ch1:2792227..2794679- (Aspergillus niger KJC3)
CTTCTCCCTCTCATCCTCCCATTCTTCCTCCTTTTTCTCCCATTTATTTT
CCATCTTCATTGGTTTAATAGACATTTTATTTGTTCTTAATTGCGTTTCT
GTTACCATTTTACTCTCCCCAAGCTCCTCATCATGCTGGGCGCTTTCCGC
CGTTCCGGCGCCGTCCATGCGCTGCGAGCTTCACGATCTCTGCTGGCCAG
ATCGATTCCTCAGCAACCTCAATGGCTCTCTGCTTCTGCACCGGCGGTCT
CATACGTCGCTCGCGCCCTCTACCATCCGTCCCCGGCTTTTCTTGATGCC
ACAGCAGCAGCTCAGGCGCAACTCAACGTCGCCGCCGACATCGAGCCCCG
GCTACCCAATTCCAAGTTCCACAGCCTGGCACAAGACGGCCTGGTCAACG
ACAGACTGATCCGGACCGTGACAAATTCCATGAAGATTGAAACCATGACC
GATGTTCAAGCTAAGACGATCCGTGAAACACTGAGCGGCGATGATGTGTG
AGTTCTTCTTCGTCTCTGCCTCCCTTCATTCACCTATCTGCAAATGGCGG
CTGACCTTGATTTTTTCTTCCCATATAGCTTGGCCCAGGCAAAGACCGGA
ACTGGAAAGACTCTTGCCTTCTTGATCCCGGTCGTCCAGCGCCTTGTTAG
TGATCCGTCAGTCAAACGCTCGCGCCCCTCATACCGTGGACAACAAGGGA
GGAGAAACACGCCCGATATTCGGGCGATTGTCATCTCTCCGACTCGTGAG
TTGGCGGAACAGATTGCCCATGAGGCACAGCGCTTGGTGTATGGACTGGG
TTTGACCGTGCAGACGGCAGTCGGCGGTACTCAAAAGAGATTGCATCTAA
ACAAGATCCGGAACGAGGGCTGCAATATCTTGGTTGGAACTCCTGGTCGT
CTGAAGGACCTTCTTTCCGATCCGTACAGCGGTGTCACCGCGCCCCAGCT
CCAAGCTCTCGTCTTCGACGAGGCTGATCGCTTGCTGGATGATGGCTTCT
CGCAAGAGATCGGTCAGATCAAGGACCTCCTGCCCAACCCGGAGGAGGTC
GACCGCCAGACCCTGATGTTCTCCGCCACCGTCCCAGGTGAAGTCATGAA
CATGGTGCGTCAGACTATGAAGCCTGACTTCAAGTTCATTAAGACTGTCT
CGGAGGATGAGGTGCCCACCCACTTGCGGGTGCCCCAGAAGGTCGTCTAC
CTGGATGGCTTCCAGAACGGCTTGCCTGCTATTCTGGAGCTGGCCAAGCA
GGGTTACGTTAACTCCCCGAATTTCAAGGCCATTGTCTACCTGAACGCAA
CGACGATGGTCTCGCTGGCCAACGACATCTTCAGGCGGCTTCAGAATGAT
CCTGAGGACCGTACCAAAGGACACGCTCTTGGCCGCCTCCCTATTCTCCA
AATCCATTCGCGACTGACTCAGGCGCAAAGAACTCGTGTTACGAGTACTT
TCCGCAACGCGCGCTCCGGCATTCTCTTCTCTTCCGACGTAACCGCCCGT
GGTCTGGATTTCCCCGATGTCACGCACGTCATCCAATACGGACTCCCCAG
CGAGCGTCAGACCTACATCCACCGCGTGGGACGTACTGGCCGTGCGAACA
AGGAAGGTGAGGGCTGGATCTTGCTGCATAACAACGAGAAGCGTGCCTTC
AAACAGATGTTGGGTGACCTGCCGATCGAGGAGGATCAGACCACGATCCC
CGTGGCGAAGGTCAACATGCGTGAAGAGATCGAGGATGATGGCTCAGAGA
CGAGCCGAACTCTACAACAAATCAAATTGGCCGCGCAGCAGGTTCCTATC
GACGATCGCGTGGAGGCATGGAAGTCCCAAACGGGTACCATCATAGGCAA
ACTCCAACCTCTGTCGGCGACCCTCCCTGCAATGCATGACCTGTCCAAGT
ACGGATACGTGCTGCCCAAGCCTCCGCATCTCCCTTCCAGAATCCAACAA
GCTTTGGAGAAGGGCGATAGGCCTCCTCCAAGGTCCAACCGTGGTGGGCC
CCGGGATTCCTTCAGGTCCCGGGATTCCTACAGGCCCCGTTCTAGCGGTG
GCTATAATGACCGCTACCAACGCTCCTCATCCCGCGACCGCGAGCCCCGC
AACCCTTGGAACGAAAGAGGCTCCTCTCGCGGCCGTCGCGAGAGCCGCTC
CTACAACCGCTACTGATTATCGGCGCTTGAGGCCAGGATCATTAACGTTC
TTAGATACCCTTCCTATGAAACGCAGCCCTGCTAAAATTGACCTTTGAAA
CCGGCTTGTTGTAATAGTGCCGGATATCTATTTGGGGATGAGCTTCTCCT
TTCTCCTTCTTCTCATTGTGATCGGACTGCGTGCAATGTTTTCTTTTAAA
AAATGTGTTCGATATGTGATCGGCTTGTATACTACATAACAGATACCACG
TGAATATGGCATAGTCTCTACTCTAGACACAATATACATGTATAATATGA
CAG

Coding sequence (CDS) from alignment at ch1:2792227..2794679-

>KJC3_001100-T1 ID=KJC3_001100-T1|Name=KJC3_001100-T1|organism=Aspergillus niger KJC3|type=CDS|length=3906bp|location=Sequence derived from alignment at ch1:2792227..2794679- (Aspergillus niger KJC3)
CTTGGCCCAGGCAAAGACCGGAACTGGAAAGACTCTTGCCTTCTTGATCC
CGGTCGTCCAGCGCCTTGTTAGTGATCCGTCAGTCAAACGCTCGCGCCCC
TCATACCGTGGACAACAAGGGAGGAGAAACACGCCCGATATTCGGGCGAT
TGTCATCTCTCCGACTCGTGAGTTGGCGGAACAGATTGCCCATGAGGCAC
AGCGCTTGGTGTATGGACTGGGTTTGACCGTGCAGACGGCAGTCGGCGGT
ACTCAAAAGAGATTGCATCTAAACAAGATCCGGAACGAGGGCTGCAATAT
CTTGGTTGGAACTCCTGGTCGTCTGAAGGACCTTCTTTCCGATCCGTACA
GCGGTGTCACCGCGCCCCAGCTCCAAGCTCTCGTCTTCGACGAGGCTGAT
CGCTTGCTGGATGATGGCTTCTCGCAAGAGATCGGTCAGATCAAGGACCT
CCTGCCCAACCCGGAGGAGGTCGACCGCCAGACCCTGATGTTCTCCGCCA
CCGTCCCAGGTGAAGTCATGAACATGGTGCGTCAGACTATGAAGCCTGAC
TTCAAGTTCATTAAGACTGTCTCGGAGGATGAGGTGCCCACCCACTTGCG
GGTGCCCCAGAAGGTCGTCTACCTGGATGGCTTCCAGAACGGCTTGCCTG
CTATTCTGGAGCTGGCCAAGCAGGGTTACGTTAACTCCCCGAATTTCAAG
GCCATTGTCTACCTGAACGCAACGACGATGGTCTCGCTGGCCAACGACAT
CTTCAGGCGGCTTCAGAATGATCCTGAGGACCGTACCAAAGGACACGCTC
TTGGCCGCCTCCCTATTCTCCAAATCCATTCGCGACTGACTCAGGCGCAA
AGAACTCGTGTTACGAGTACTTTCCGCAACGCGCGCTCCGGCATTCTCTT
CTCTTCCGACGTAACCGCCCGTGGTCTGGATTTCCCCGATGTCACGCACG
TCATCCAATACGGACTCCCCAGCGAGCGTCAGACCTACATCCACCGCGTG
GGACGTACTGGCCGTGCGAACAAGGAAGGTGAGGGCTGGATCTTGCTGCA
TAACAACGAGAAGCGTGCCTTCAAACAGATGTTGGGTGACCTGCCGATCG
AGGAGGATCAGACCACGATCCCCGTGGCGAAGGTCAACATGCGTGAAGAG
ATCGAGGATGATGGCTCAGAGACGAGCCGAACTCTACAACAAATCAAATT
GGCCGCGCAGCAGGTTCCTATCGACGATCGCGTGGAGGCATGGAAGTCCC
AAACGGGTACCATCATAGGCAAACTCCAACCTCTGTCGGCGACCCTCCCT
GCAATGCATGACCTGTCCAAGTACGGATACGTGCTGCCCAAGCCTCCGCA
TCTCCCTTCCAGAATCCAACAAGCTTTGGAGAAGGGCGATAGGCCTCCTC
CAAGGTCCAACCGTGGTGGGCCCCGGGATTCCTTCAGGTCCCGGGATTCC
TACAGGCCCCGTTCTAGCGGTGGCTATAATGACCGCTACCAACGCTCCTC
ATCCCGCGACCGCGAGCCCCGCAACCCTTGGAACGAAAGAGGCTCCTCTC
GCGGCCGTCGCGAGAGCCGCTCCTACAACCGCTACTGAATGCTGGGCGCT
TTCCGCCGTTCCGGCGCCGTCCATGCGCTGCGAGCTTCACGATCTCTGCT
GGCCAGATCGATTCCTCAGCAACCTCAATGGCTCTCTGCTTCTGCACCGG
CGGTCTCATACGTCGCTCGCGCCCTCTACCATCCGTCCCCGGCTTTTCTT
GATGCCACAGCAGCAGCTCAGGCGCAACTCAACGTCGCCGCCGACATCGA
GCCCCGGCTACCCAATTCCAAGTTCCACAGCCTGGCACAAGACGGCCTGG
TCAACGACAGACTGATCCGGACCGTGACAAATTCCATGAAGATTGAAACC
ATGACCGATGTTCAAGCTAAGACGATCCGTGAAACACTGAGCGGCGATGA
TGTCTTGGCCCAGGCAAAGACCGGAACTGGAAAGACTCTTGCCTTCTTGA
TCCCGGTCGTCCAGCGCCTTGTTAGTGATCCGTCAGTCAAACGCTCGCGC
CCCTCATACCGTGGACAACAAGGGAGGAGAAACACGCCCGATATTCGGGC
GATTGTCATCTCTCCGACTCGTGAGTTGGCGGAACAGATTGCCCATGAGG
CACAGCGCTTGGTGTATGGACTGGGTTTGACCGTGCAGACGGCAGTCGGC
GGTACTCAAAAGAGATTGCATCTAAACAAGATCCGGAACGAGGGCTGCAA
TATCTTGGTTGGAACTCCTGGTCGTCTGAAGGACCTTCTTTCCGATCCGT
ACAGCGGTGTCACCGCGCCCCAGCTCCAAGCTCTCGTCTTCGACGAGGCT
GATCGCTTGCTGGATGATGGCTTCTCGCAAGAGATCGGTCAGATCAAGGA
CCTCCTGCCCAACCCGGAGGAGGTCGACCGCCAGACCCTGATGTTCTCCG
CCACCGTCCCAGGTGAAGTCATGAACATGGTGCGTCAGACTATGAAGCCT
GACTTCAAGTTCATTAAGACTGTCTCGGAGGATGAGGTGCCCACCCACTT
GCGGGTGCCCCAGAAGGTCGTCTACCTGGATGGCTTCCAGAACGGCTTGC
CTGCTATTCTGGAGCTGGCCAAGCAGGGTTACGTTAACTCCCCGAATTTC
AAGGCCATTGTCTACCTGAACGCAACGACGATGGTCTCGCTGGCCAACGA
CATCTTCAGGCGGCTTCAGAATGATCCTGAGGACCGTACCAAAGGACACG
CTCTTGGCCGCCTCCCTATTCTCCAAATCCATTCGCGACTGACTCAGGCG
CAAAGAACTCGTGTTACGAGTACTTTCCGCAACGCGCGCTCCGGCATTCT
CTTCTCTTCCGACGTAACCGCCCGTGGTCTGGATTTCCCCGATGTCACGC
ACGTCATCCAATACGGACTCCCCAGCGAGCGTCAGACCTACATCCACCGC
GTGGGACGTACTGGCCGTGCGAACAAGGAAGGTGAGGGCTGGATCTTGCT
GCATAACAACGAGAAGCGTGCCTTCAAACAGATGTTGGGTGACCTGCCGA
TCGAGGAGGATCAGACCACGATCCCCGTGGCGAAGGTCAACATGCGTGAA
GAGATCGAGGATGATGGCTCAGAGACGAGCCGAACTCTACAACAAATCAA
ATTGGCCGCGCAGCAGGTTCCTATCGACGATCGCGTGGAGGCATGGAAGT
CCCAAACGGGTACCATCATAGGCAAACTCCAACCTCTGTCGGCGACCCTC
CCTGCAATGCATGACCTGTCCAAGTACGGATACGTGCTGCCCAAGCCTCC
GCATCTCCCTTCCAGAATCCAACAAGCTTTGGAGAAGGGCGATAGGCCTC
CTCCAAGGTCCAACCGTGGTGGGCCCCGGGATTCCTTCAGGTCCCGGGAT
TCCTACAGGCCCCGTTCTAGCGGTGGCTATAATGACCGCTACCAACGCTC
CTCATCCCGCGACCGCGAGCCCCGCAACCCTTGGAACGAAAGAGGCTCCT
CTCGCGGCCGTCGCGAGAGCCGCTCCTACAACCGCTACTGAATGCTGGGC
GCTTTCCGCCGTTCCGGCGCCGTCCATGCGCTGCGAGCTTCACGATCTCT
GCTGGCCAGATCGATTCCTCAGCAACCTCAATGGCTCTCTGCTTCTGCAC
CGGCGGTCTCATACGTCGCTCGCGCCCTCTACCATCCGTCCCCGGCTTTT
CTTGATGCCACAGCAGCAGCTCAGGCGCAACTCAACGTCGCCGCCGACAT
CGAGCCCCGGCTACCCAATTCCAAGTTCCACAGCCTGGCACAAGACGGCC
TGGTCAACGACAGACTGATCCGGACCGTGACAAATTCCATGAAGATTGAA
ACCATGACCGATGTTCAAGCTAAGACGATCCGTGAAACACTGAGCGGCGA
TGATGT

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **Molecular Function**
Term	Definition
GO:0005524	ATP binding
GO:0003676	nucleic acid binding

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
KJC3_001100	KJC3_001100	Aspergillus niger KJC3	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
KJC3_001100-T1	KJC3_001100-T1-protein	Aspergillus niger KJC3	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
KJC3_001100-T1.cds	KJC3_001100-T1.cds	Aspergillus niger KJC3	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
KJC3_001100-T1.utr3p1	KJC3_001100-T1.utr3p1	Aspergillus niger KJC3	three_prime_UTR

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
KJC3_001100-T1.exon2	KJC3_001100-T1.exon2	Aspergillus niger KJC3	exon
KJC3_001100-T1.exon1	KJC3_001100-T1.exon1	Aspergillus niger KJC3	exon

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
KJC3_001100-T1.utr5p1	KJC3_001100-T1.utr5p1	Aspergillus niger KJC3	five_prime_UTR

Properties


Property Name	Value
DBxref	InterPro:IPR027417
DBxref	InterPro:IPR000629
DBxref	InterPro:IPR011545
DBxref	InterPro:IPR014001
DBxref	InterPro:IPR001650
DBxref	PFAM:PF00271
DBxref	PFAM:PF00270
Product	hypothetical protein

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC3	2021-10-31

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
ch1	supercontig	ch1:2792227..2794679 -

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KJC3_001100-T1, KJC3_001100-T1 (mRNA) Aspergillus niger KJC3