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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch1:2809322..2811663- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_001104-T1 ID=KJC3_001104-T1|Name=KJC3_001104-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2342bp|location=Sequence derived from alignment at ch1:2809322..2811663- (Aspergillus niger KJC3)
AGATAAGCAAACCAACTTGCTGCTCTCTTTAATCACTTGCTCCCTCATTA
CTTCCTACTGACTGACAACTCCTACTACTCTGACTTGACAGGTGGTCCGA
GTTGGTTAGTCCCCATTCTACTAGCCCATTCTGCAATGCCTTCTCCTTGT
CCTTCTTAGAAAGCTTCCCGTCCCCATTCGCTGGTGGCTTGTGTGTGTGT
GTGTGTTCGTGATCTCACTTCCCCCCCCGAATATGCAGTCTTAACGAGCT
CCGCTCTCGTTCCACCCTGTCATCCCGCCCAGCAGTCATTCCCTCCCTCC
TCCCCCTCCTGTGTGATTGTAAAAAAAAAAACAATAAAAAACAACGGAGA
GAGGGGAACAACAAGAAAAAGGATAGAAAAACCGCCATGTCGGCGGATAG
ACTTCCTTTGGCGGATTCAACACCTCTCGACTCTACCTCAGGCGTACGGG
GGACTTCTTCGTCTGAATCAGAACAACAACGTTGGTTTCTTTGCCGCCTT
CTCTGTGATCTGACCGTCCAGTCGACGAACTTACCAACACCATTTCCTCA
GGAACGTCCAGCGATCCCCCTCAAATTCCTGTGAGGCTTAGACGACGAAG
GCACTTGCCTATGTCCGATGATCAATCCTCCAGGAATCAAATCTTCTACT
TTGTCGACTCCAATTCCTCGTCCCGCGAAAAACGGGCTCATGTGATGCGT
CACCATGTTCAGGAGAAACGCCGACAGAGGAAGTCATCCCACTCCCGGGC
GGACGGCGACCGGAGGGGTAGTCGCCCTCTTCGCTACTCCCCATGGCCTC
ATAAGAGGACAGATGTAGACAATCATGATGATTACGAATCCATTGCCCCT
CAGGAGGTTCCCAGCGAAACTTCAGTAAACGGGCATTCCTTGGTACGTCC
ATCTTTTACCATCTTTACAACACTTTCCCCATTAATTACACAATTGTCTC
CACCGCTTCGCCATACTGACCGGACTAATGCTATAGATTCGATTTGGTCT
TCCTCCTGTGCAATCCCCACCCGAATCGGTAGATGGATACCAGTCACCTT
CACCAGTCACCATGCTTGATGCCTCGAGAAAAGATCCATTCAACTCTCTG
CCAGGTGTCTACTCCCGTGATGACCAAGAGCTAGCCGACTACTGGACTAA
CCGGCTAACCTACTGGTCGGGTCAAAATAAGTATATCAAAGACCTTGTGT
TCAAGGCCGCCATGAGTCACCCATTGTGCTTCCAAGCAGTCATCCTCACA
TACTGCGCTCGCTGGAAAGCCCAGCTCTACAACCTCCAAGACAGCAAGGA
AGCTCATTATCATCTCGATAAGGCCGTACAGGGAATCGAAGAAGCAAAGA
TCGGTTCTGCAGGAGTCGATGAAGATAACCTAGCATTGGCACTAAGCGGC
ATGTCACTACACGAGGATCGGTTTGGTGACAAGCAAGTCGCTCGGAAATA
CGAAGACCAGGCGGTTGAAATCCTCCGGTCTCGATCCGGCACGCAAAGTA
CGGTTGAGGTTTTCATGCATTACGTGCGATACGTGATGATCCCACCACCG
ATGGAGATGAGCGAAGAGGGGAAGCGCTGGCTCGTCTCTTTTCTTCATGC
GGCAGAGCAGCTGATGCACCAGCATAGCACACCTTCTTACTTGGAGTCTG
TACCCCAGCGACGGACTGCATTTCAGATGGATAGTCCCTTGTTTCCTCTA
CTTTCCAGTGGGCCCCGCCCTTCGCAGGTGCCTCAGGATTACCGCATGTA
TGTTGTGCGCAATGCGCCCACCCAGGAGATTACGAGAACTGCAGCCTTGA
TCTACATCACCGCGGCGCTGTGGGATCTGGCAGCATCGGAGAACAAAACC
GGGCGGTTTCTCAACCACCTCCACCACCTCGTGCGACTGCACAACCTGGA
CCGGTATCCAGCCTGCGAGACCTTCATCTGGCTGCTCCTGGAAGAAGGCT
ATGGAGCGGACCTGAAGGAGTCGGAACGCGGATGGTCCACAGGCGAGCTG
CTGAAGATGCACAAACAGCTCCGACCGGACCTTCAATTTCAATACAACGA
AATCCTCTTCAGTCTACTCATGCTCCATCCGCCCATTCGAGGAATCGATG
CATTTGAGGAAGAACTGCTTGGCCCAATTTGAGCGAGAGCGACGACCAAA
ATTACTTTTCGAGATACCCCTTTCCCCTGCCGACATTCATCTACTTTTAG
CCATTGTTTTCTTTTCTTGGTTTGAAAAGAAGCGTGTGTTGTGTTATGTT
GTATTGTGTTCTGTATGTTTGTATATTTCGGGCAGAACAGAAAAAAGTAC
TGATTAGGTACGAATCCAAAACCCATGATTGTTTTCCGCGAC back to topCoding sequence (CDS) from alignment at ch1:2809322..2811663- >KJC3_001104-T1 ID=KJC3_001104-T1|Name=KJC3_001104-T1|organism=Aspergillus niger KJC3|type=CDS|length=4743bp|location=Sequence derived from alignment at ch1:2809322..2811663- (Aspergillus niger KJC3)
ATTCGATTTGGTCTTCCTCCTGTGCAATCCCCACCCGAATCGGTAGATGG
ATACCAGTCACCTTCACCAGTCACCATGCTTGATGCCTCGAGAAAAGATC
CATTCAACTCTCTGCCAGGTGTCTACTCCCGTGATGACCAAGAGCTAGCC
GACTACTGGACTAACCGGCTAACCTACTGGTCGGGTCAAAATAAGTATAT
CAAAGACCTTGTGTTCAAGGCCGCCATGAGTCACCCATTGTGCTTCCAAG
CAGTCATCCTCACATACTGCGCTCGCTGGAAAGCCCAGCTCTACAACCTC
CAAGACAGCAAGGAAGCTCATTATCATCTCGATAAGGCCGTACAGGGAAT
CGAAGAAGCAAAGATCGGTTCTGCAGGAGTCGATGAAGATAACCTAGCAT
TGGCACTAAGCGGCATGTCACTACACGAGGATCGGTTTGGTGACAAGCAA
GTCGCTCGGAAATACGAAGACCAGGCGGTTGAAATCCTCCGGTCTCGATC
CGGCACGCAAAGTACGGTTGAGGTTTTCATGCATTACGTGCGATACGTGA
TGATCCCACCACCGATGGAGATGAGCGAAGAGGGGAAGCGCTGGCTCGTC
TCTTTTCTTCATGCGGCAGAGCAGCTGATGCACCAGCATAGCACACCTTC
TTACTTGGAGTCTGTACCCCAGCGACGGACTGCATTTCAGATGGATAGTC
CCTTGTTTCCTCTACTTTCCAGTGGGCCCCGCCCTTCGCAGGTGCCTCAG
GATTACCGCATGTATGTTGTGCGCAATGCGCCCACCCAGGAGATTACGAG
AACTGCAGCCTTGATCTACATCACCGCGGCGCTGTGGGATCTGGCAGCAT
CGGAGAACAAAACCGGGCGGTTTCTCAACCACCTCCACCACCTCGTGCGA
CTGCACAACCTGGACCGGTATCCAGCCTGCGAGACCTTCATCTGGCTGCT
CCTGGAAGAAGGCTATGGAGCGGACCTGAAGGAGTCGGAACGCGGATGGT
CCACAGGCGAGCTGCTGAAGATGCACAAACAGCTCCGACCGGACCTTCAA
TTTCAATACAACGAAATCCTCTTCAGTCTACTCATGCTCCATCCGCCCAT
TCGAGGAATCGATGCATTTGAGGAAGAACTGCTTGGCCCAATTTGAGAAC
GTCCAGCGATCCCCCTCAAATTCCTGTGAGGCTTAGACGACGAAGGCACT
TGCCTATGTCCGATGATCAATCCTCCAGGAATCAAATCTTCTACTTTGTC
GACTCCAATTCCTCGTCCCGCGAAAAACGGGCTCATGTGATGCGTCACCA
TGTTCAGGAGAAACGCCGACAGAGGAAGTCATCCCACTCCCGGGCGGACG
GCGACCGGAGGGGTAGTCGCCCTCTTCGCTACTCCCCATGGCCTCATAAG
AGGACAGATGTAGACAATCATGATGATTACGAATCCATTGCCCCTCAGGA
GGTTCCCAGCGAAACTTCAGTAAACGGGCATTCCTTGATGTCGGCGGATA
GACTTCCTTTGGCGGATTCAACACCTCTCGACTCTACCTCAGGCGTACGG
GGGACTTCTTCGTCTGAATCAGAACAACAACATTCGATTTGGTCTTCCTC
CTGTGCAATCCCCACCCGAATCGGTAGATGGATACCAGTCACCTTCACCA
GTCACCATGCTTGATGCCTCGAGAAAAGATCCATTCAACTCTCTGCCAGG
TGTCTACTCCCGTGATGACCAAGAGCTAGCCGACTACTGGACTAACCGGC
TAACCTACTGGTCGGGTCAAAATAAGTATATCAAAGACCTTGTGTTCAAG
GCCGCCATGAGTCACCCATTGTGCTTCCAAGCAGTCATCCTCACATACTG
CGCTCGCTGGAAAGCCCAGCTCTACAACCTCCAAGACAGCAAGGAAGCTC
ATTATCATCTCGATAAGGCCGTACAGGGAATCGAAGAAGCAAAGATCGGT
TCTGCAGGAGTCGATGAAGATAACCTAGCATTGGCACTAAGCGGCATGTC
ACTACACGAGGATCGGTTTGGTGACAAGCAAGTCGCTCGGAAATACGAAG
ACCAGGCGGTTGAAATCCTCCGGTCTCGATCCGGCACGCAAAGTACGGTT
GAGGTTTTCATGCATTACGTGCGATACGTGATGATCCCACCACCGATGGA
GATGAGCGAAGAGGGGAAGCGCTGGCTCGTCTCTTTTCTTCATGCGGCAG
AGCAGCTGATGCACCAGCATAGCACACCTTCTTACTTGGAGTCTGTACCC
CAGCGACGGACTGCATTTCAGATGGATAGTCCCTTGTTTCCTCTACTTTC
CAGTGGGCCCCGCCCTTCGCAGGTGCCTCAGGATTACCGCATGTATGTTG
TGCGCAATGCGCCCACCCAGGAGATTACGAGAACTGCAGCCTTGATCTAC
ATCACCGCGGCGCTGTGGGATCTGGCAGCATCGGAGAACAAAACCGGGCG
GTTTCTCAACCACCTCCACCACCTCGTGCGACTGCACAACCTGGACCGGT
ATCCAGCCTGCGAGACCTTCATCTGGCTGCTCCTGGAAGAAGGCTATGGA
GCGGACCTGAAGGAGTCGGAACGCGGATGGTCCACAGGCGAGCTGCTGAA
GATGCACAAACAGCTCCGACCGGACCTTCAATTTCAATACAACGAAATCC
TCTTCAGTCTACTCATGCTCCATCCGCCCATTCGAGGAATCGATGCATTT
GAGGAAGAACTGCTTGGCCCAATTTGAGAACGTCCAGCGATCCCCCTCAA
ATTCCTGTGAGGCTTAGACGACGAAGGCACTTGCCTATGTCCGATGATCA
ATCCTCCAGGAATCAAATCTTCTACTTTGTCGACTCCAATTCCTCGTCCC
GCGAAAAACGGGCTCATGTGATGCGTCACCATGTTCAGGAGAAACGCCGA
CAGAGGAAGTCATCCCACTCCCGGGCGGACGGCGACCGGAGGGGTAGTCG
CCCTCTTCGCTACTCCCCATGGCCTCATAAGAGGACAGATGTAGACAATC
ATGATGATTACGAATCCATTGCCCCTCAGGAGGTTCCCAGCGAAACTTCA
GTAAACGGGCATTCCTTGATGTCGGCGGATAGACTTCCTTTGGCGGATTC
AACACCTCTCGACTCTACCTCAGGCGTACGGGGGACTTCTTCGTCTGAAT
CAGAACAACAACATTCGATTTGGTCTTCCTCCTGTGCAATCCCCACCCGA
ATCGGTAGATGGATACCAGTCACCTTCACCAGTCACCATGCTTGATGCCT
CGAGAAAAGATCCATTCAACTCTCTGCCAGGTGTCTACTCCCGTGATGAC
CAAGAGCTAGCCGACTACTGGACTAACCGGCTAACCTACTGGTCGGGTCA
AAATAAGTATATCAAAGACCTTGTGTTCAAGGCCGCCATGAGTCACCCAT
TGTGCTTCCAAGCAGTCATCCTCACATACTGCGCTCGCTGGAAAGCCCAG
CTCTACAACCTCCAAGACAGCAAGGAAGCTCATTATCATCTCGATAAGGC
CGTACAGGGAATCGAAGAAGCAAAGATCGGTTCTGCAGGAGTCGATGAAG
ATAACCTAGCATTGGCACTAAGCGGCATGTCACTACACGAGGATCGGTTT
GGTGACAAGCAAGTCGCTCGGAAATACGAAGACCAGGCGGTTGAAATCCT
CCGGTCTCGATCCGGCACGCAAAGTACGGTTGAGGTTTTCATGCATTACG
TGCGATACGTGATGATCCCACCACCGATGGAGATGAGCGAAGAGGGGAAG
CGCTGGCTCGTCTCTTTTCTTCATGCGGCAGAGCAGCTGATGCACCAGCA
TAGCACACCTTCTTACTTGGAGTCTGTACCCCAGCGACGGACTGCATTTC
AGATGGATAGTCCCTTGTTTCCTCTACTTTCCAGTGGGCCCCGCCCTTCG
CAGGTGCCTCAGGATTACCGCATGTATGTTGTGCGCAATGCGCCCACCCA
GGAGATTACGAGAACTGCAGCCTTGATCTACATCACCGCGGCGCTGTGGG
ATCTGGCAGCATCGGAGAACAAAACCGGGCGGTTTCTCAACCACCTCCAC
CACCTCGTGCGACTGCACAACCTGGACCGGTATCCAGCCTGCGAGACCTT
CATCTGGCTGCTCCTGGAAGAAGGCTATGGAGCGGACCTGAAGGAGTCGG
AACGCGGATGGTCCACAGGCGAGCTGCTGAAGATGCACAAACAGCTCCGA
CCGGACCTTCAATTTCAATACAACGAAATCCTCTTCAGTCTACTCATGCT
CCATCCGCCCATTCGAGGAATCGATGCATTTGAGGAAGAACTGCTTGGCC
CAATTTGAGAACGTCCAGCGATCCCCCTCAAATTCCTGTGAGGCTTAGAC
GACGAAGGCACTTGCCTATGTCCGATGATCAATCCTCCAGGAATCAAATC
TTCTACTTTGTCGACTCCAATTCCTCGTCCCGCGAAAAACGGGCTCATGT
GATGCGTCACCATGTTCAGGAGAAACGCCGACAGAGGAAGTCATCCCACT
CCCGGGCGGACGGCGACCGGAGGGGTAGTCGCCCTCTTCGCTACTCCCCA
TGGCCTCATAAGAGGACAGATGTAGACAATCATGATGATTACGAATCCAT
TGCCCCTCAGGAGGTTCCCAGCGAAACTTCAGTAAACGGGCATTCCTTGA
TGTCGGCGGATAGACTTCCTTTGGCGGATTCAACACCTCTCGACTCTACC
TCAGGCGTACGGGGGACTTCTTCGTCTGAATCAGAACAACAAC back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_001104-T1.utr3p1 | KJC3_001104-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_001104-T1.utr5p1 | KJC3_001104-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
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| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
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| ch1 | supercontig | ch1:2809322..2811663 - |
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