You are here

Home

KJC3_001104-T2, KJC3_001104-T2 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_001104-T2
Unique NameKJC3_001104-T2
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch1:2809322..2811663-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_001104-T2 ID=KJC3_001104-T2|Name=KJC3_001104-T2|organism=Aspergillus niger KJC3|type=mRNA|length=2342bp|location=Sequence derived from alignment at ch1:2809322..2811663- (Aspergillus niger KJC3)
AGATAAGCAAACCAACTTGCTGCTCTCTTTAATCACTTGCTCCCTCATTA
CTTCCTACTGACTGACAACTCCTACTACTCTGACTTGACAGGTGGTCCGA
GTTGGTTAGTCCCCATTCTACTAGCCCATTCTGCAATGCCTTCTCCTTGT
CCTTCTTAGAAAGCTTCCCGTCCCCATTCGCTGGTGGCTTGTGTGTGTGT
GTGTGTTCGTGATCTCACTTCCCCCCCCGAATATGCAGTCTTAACGAGCT
CCGCTCTCGTTCCACCCTGTCATCCCGCCCAGCAGTCATTCCCTCCCTCC
TCCCCCTCCTGTGTGATTGTAAAAAAAAAAACAATAAAAAACAACGGAGA
GAGGGGAACAACAAGAAAAAGGATAGAAAAACCGCCATGTCGGCGGATAG
ACTTCCTTTGGCGGATTCAACACCTCTCGACTCTACCTCAGGCGTACGGG
GGACTTCTTCGTCTGAATCAGAACAACAACGTTGGTTTCTTTGCCGCCTT
CTCTGTGATCTGACCGTCCAGTCGACGAACTTACCAACACCATTTCCTCA
GGAACGTCCAGCGATCCCCCTCAAATTCCTGTGAGGCTTAGACGACGAAG
GCACTTGCCTATGTCCGATGATCAATCCTCCAGGAATCAAATCTTCTACT
TTGTCGACTCCAATTCCTCGTCCCGCGAAAAACGGGCTCATGTGATGCGT
CACCATGTTCAGGAGAAACGCCGACAGAGGAAGTCATCCCACTCCCGGGC
GGACGGCGACCGGAGGGGTAGTCGCCCTCTTCGCTACTCCCCATGGCCTC
ATAAGAGGACAGATGTAGACAATCATGATGATTACGAATCCATTGCCCCT
CAGGAGGTTCCCAGCGAAACTTCAGTAAACGGGCATTCCTTGGTACGTCC
ATCTTTTACCATCTTTACAACACTTTCCCCATTAATTACACAATTGTCTC
CACCGCTTCGCCATACTGACCGGACTAATGCTATAGATTCGATTTGGTCT
TCCTCCTGTGCAATCCCCACCCGAATCGGTAGATGGATACCAGTCACCTT
CACCAGTCACCATGCTTGATGCCTCGAGAAAAGATCCATTCAACTCTCTG
CCAGGTGTCTACTCCCGTGATGACCAAGAGCTAGCCGACTACTGGACTAA
CCGGCTAACCTACTGGTCGGGTCAAAATAAGTATATCAAAGACCTTGTGT
TCAAGGCCGCCATGAGTCACCCATTGTGCTTCCAAGCAGTCATCCTCACA
TACTGCGCTCGCTGGAAAGCCCAGCTCTACAACCTCCAAGACAGCAAGGA
AGCTCATTATCATCTCGATAAGGCCGTACAGGGAATCGAAGAAGCAAAGA
TCGGTTCTGCAGGAGTCGATGAAGATAACCTAGCATTGGCACTAAGCGGC
ATGTCACTACACGAGGATCGGTTTGGTGACAAGCAAGTCGCTCGGAAATA
CGAAGACCAGGCGGTTGAAATCCTCCGGTCTCGATCCGGCACGCAAAGTA
CGGTTGAGGTTTTCATGCATTACGTGCGATACGTGATGATCCCACCACCG
ATGGAGATGAGCGAAGAGGGGAAGCGCTGGCTCGTCTCTTTTCTTCATGC
GGCAGAGCAGCTGATGCACCAGCATAGCACACCTTCTTACTTGGAGTCTG
TACCCCAGCGACGGACTGCATTTCAGATGGATAGTCCCTTGTTTCCTCTA
CTTTCCAGTGGGCCCCGCCCTTCGCAGGTGCCTCAGGATTACCGCATGTA
TGTTGTGCGCAATGCGCCCACCCAGGAGATTACGAGAACTGCAGCCTTGA
TCTACATCACCGCGGCGCTGTGGGATCTGGCAGCATCGGAGAACAAAACC
GGGCGGTTTCTCAACCACCTCCACCACCTCGTGCGACTGCACAACCTGGA
CCGGTATCCAGCCTGCGAGACCTTCATCTGGCTGCTCCTGGAAGAAGGCT
ATGGAGCGGACCTGAAGGAGTCGGAACGCGGATGGTCCACAGGCGAGCTG
CTGAAGATGCACAAACAGCTCCGACCGGACCTTCAATTTCAATACAACGA
AATCCTCTTCAGTCTACTCATGCTCCATCCGCCCATTCGAGGAATCGATG
CATTTGAGGAAGAACTGCTTGGCCCAATTTGAGCGAGAGCGACGACCAAA
ATTACTTTTCGAGATACCCCTTTCCCCTGCCGACATTCATCTACTTTTAG
CCATTGTTTTCTTTTCTTGGTTTGAAAAGAAGCGTGTGTTGTGTTATGTT
GTATTGTGTTCTGTATGTTTGTATATTTCGGGCAGAACAGAAAAAAGTAC
TGATTAGGTACGAATCCAAAACCCATGATTGTTTTCCGCGAC
back to top

Coding sequence (CDS) from alignment at ch1:2809322..2811663-

>KJC3_001104-T2 ID=KJC3_001104-T2|Name=KJC3_001104-T2|organism=Aspergillus niger KJC3|type=CDS|length=2856bp|location=Sequence derived from alignment at ch1:2809322..2811663- (Aspergillus niger KJC3)
ATTCGATTTGGTCTTCCTCCTGTGCAATCCCCACCCGAATCGGTAGATGG
ATACCAGTCACCTTCACCAGTCACCATGCTTGATGCCTCGAGAAAAGATC
CATTCAACTCTCTGCCAGGTGTCTACTCCCGTGATGACCAAGAGCTAGCC
GACTACTGGACTAACCGGCTAACCTACTGGTCGGGTCAAAATAAGTATAT
CAAAGACCTTGTGTTCAAGGCCGCCATGAGTCACCCATTGTGCTTCCAAG
CAGTCATCCTCACATACTGCGCTCGCTGGAAAGCCCAGCTCTACAACCTC
CAAGACAGCAAGGAAGCTCATTATCATCTCGATAAGGCCGTACAGGGAAT
CGAAGAAGCAAAGATCGGTTCTGCAGGAGTCGATGAAGATAACCTAGCAT
TGGCACTAAGCGGCATGTCACTACACGAGGATCGGTTTGGTGACAAGCAA
GTCGCTCGGAAATACGAAGACCAGGCGGTTGAAATCCTCCGGTCTCGATC
CGGCACGCAAAGTACGGTTGAGGTTTTCATGCATTACGTGCGATACGTGA
TGATCCCACCACCGATGGAGATGAGCGAAGAGGGGAAGCGCTGGCTCGTC
TCTTTTCTTCATGCGGCAGAGCAGCTGATGCACCAGCATAGCACACCTTC
TTACTTGGAGTCTGTACCCCAGCGACGGACTGCATTTCAGATGGATAGTC
CCTTGTTTCCTCTACTTTCCAGTGGGCCCCGCCCTTCGCAGGTGCCTCAG
GATTACCGCATGTATGTTGTGCGCAATGCGCCCACCCAGGAGATTACGAG
AACTGCAGCCTTGATCTACATCACCGCGGCGCTGTGGGATCTGGCAGCAT
CGGAGAACAAAACCGGGCGGTTTCTCAACCACCTCCACCACCTCGTGCGA
CTGCACAACCTGGACCGGTATCCAGCCTGCGAGACCTTCATCTGGCTGCT
CCTGGAAGAAGGCTATGGAGCGGACCTGAAGGAGTCGGAACGCGGATGGT
CCACAGGCGAGCTGCTGAAGATGCACAAACAGCTCCGACCGGACCTTCAA
TTTCAATACAACGAAATCCTCTTCAGTCTACTCATGCTCCATCCGCCCAT
TCGAGGAATCGATGCATTTGAGGAAGAACTGCTTGGCCCAATTTGAATGT
CCGATGATCAATCCTCCAGGAATCAAATCTTCTACTTTGTCGACTCCAAT
TCCTCGTCCCGCGAAAAACGGGCTCATGTGATGCGTCACCATGTTCAGGA
GAAACGCCGACAGAGGAAGTCATCCCACTCCCGGGCGGACGGCGACCGGA
GGGGTAGTCGCCCTCTTCGCTACTCCCCATGGCCTCATAAGAGGACAGAT
GTAGACAATCATGATGATTACGAATCCATTGCCCCTCAGGAGGTTCCCAG
CGAAACTTCAGTAAACGGGCATTCCTTGATTCGATTTGGTCTTCCTCCTG
TGCAATCCCCACCCGAATCGGTAGATGGATACCAGTCACCTTCACCAGTC
ACCATGCTTGATGCCTCGAGAAAAGATCCATTCAACTCTCTGCCAGGTGT
CTACTCCCGTGATGACCAAGAGCTAGCCGACTACTGGACTAACCGGCTAA
CCTACTGGTCGGGTCAAAATAAGTATATCAAAGACCTTGTGTTCAAGGCC
GCCATGAGTCACCCATTGTGCTTCCAAGCAGTCATCCTCACATACTGCGC
TCGCTGGAAAGCCCAGCTCTACAACCTCCAAGACAGCAAGGAAGCTCATT
ATCATCTCGATAAGGCCGTACAGGGAATCGAAGAAGCAAAGATCGGTTCT
GCAGGAGTCGATGAAGATAACCTAGCATTGGCACTAAGCGGCATGTCACT
ACACGAGGATCGGTTTGGTGACAAGCAAGTCGCTCGGAAATACGAAGACC
AGGCGGTTGAAATCCTCCGGTCTCGATCCGGCACGCAAAGTACGGTTGAG
GTTTTCATGCATTACGTGCGATACGTGATGATCCCACCACCGATGGAGAT
GAGCGAAGAGGGGAAGCGCTGGCTCGTCTCTTTTCTTCATGCGGCAGAGC
AGCTGATGCACCAGCATAGCACACCTTCTTACTTGGAGTCTGTACCCCAG
CGACGGACTGCATTTCAGATGGATAGTCCCTTGTTTCCTCTACTTTCCAG
TGGGCCCCGCCCTTCGCAGGTGCCTCAGGATTACCGCATGTATGTTGTGC
GCAATGCGCCCACCCAGGAGATTACGAGAACTGCAGCCTTGATCTACATC
ACCGCGGCGCTGTGGGATCTGGCAGCATCGGAGAACAAAACCGGGCGGTT
TCTCAACCACCTCCACCACCTCGTGCGACTGCACAACCTGGACCGGTATC
CAGCCTGCGAGACCTTCATCTGGCTGCTCCTGGAAGAAGGCTATGGAGCG
GACCTGAAGGAGTCGGAACGCGGATGGTCCACAGGCGAGCTGCTGAAGAT
GCACAAACAGCTCCGACCGGACCTTCAATTTCAATACAACGAAATCCTCT
TCAGTCTACTCATGCTCCATCCGCCCATTCGAGGAATCGATGCATTTGAG
GAAGAACTGCTTGGCCCAATTTGAATGTCCGATGATCAATCCTCCAGGAA
TCAAATCTTCTACTTTGTCGACTCCAATTCCTCGTCCCGCGAAAAACGGG
CTCATGTGATGCGTCACCATGTTCAGGAGAAACGCCGACAGAGGAAGTCA
TCCCACTCCCGGGCGGACGGCGACCGGAGGGGTAGTCGCCCTCTTCGCTA
CTCCCCATGGCCTCATAAGAGGACAGATGTAGACAATCATGATGATTACG
AATCCATTGCCCCTCAGGAGGTTCCCAGCGAAACTTCAGTAAACGGGCAT
TCCTTG
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_001104KJC3_001104Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001104-T2KJC3_001104-T2-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001104-T2.cdsKJC3_001104-T2.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001104-T2.utr3p1KJC3_001104-T2.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001104-T2.exon2KJC3_001104-T2.exon2Aspergillus niger KJC3exon
KJC3_001104-T2.exon1KJC3_001104-T2.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001104-T2.utr5p1KJC3_001104-T2.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch1supercontigch1:2809322..2811663 -
Powered by Drupal