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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch1:2821224..2823164- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_001108-T1 ID=KJC3_001108-T1|Name=KJC3_001108-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1941bp|location=Sequence derived from alignment at ch1:2821224..2823164- (Aspergillus niger KJC3)
CTGCTTGAAGAATCAGCTACACTGAGTCTGACCGCAGATGTTCGACATCA
ACTCCTCATCTGGATCAAGATACATCATCCCAAACCCCAAGTAAGTAGTA
TCTTTTGAGGAGCAGTCTCCCACACACAGTTAATGATAATGGCGATGATG
GATGGCACACACCAACGCGTGAATAATCCATCTTATTGTCTTTTACTCAG
GAATCACTCTGACAGCTGGTCTTACAAGACAACCGGCCTTTGCTGACCCG
TTCATCCTCCATACAGCTTAGCCGAACTCATCATTTAGATAAACTGAATT
CCATCCCAACACAATGACCAAAATCATCGACGACAACATGGACCAAGATA
CGAGTGTAAGTACAAGTCCAGATCAATCCAGATCCCACCATGCCTCATTC
TACATCACCTCCCTCACCATCCCCCACACAAAACACATCTAACCACCATC
ATCCCCAATCTATCCAGACCACAACCGCCATGATCACAACCACCACTCGT
AAAAGACGAGCAGCCTGTGATAATGACAATGGTGACTCCAAAAATACCTC
ACCAGGCACTCTCATCAACACCACTCCCAACGCAACCAACAATGAAACAG
GCCATCAACCCTTCAAACGCCCTCGTATCCCCTCCCAATTTACCAGACAA
GCCGAGCGTTTCGAAGAAGCCCTGAACAAAGAGATCCAAGAACAGGAAGA
TGCTCTCCGCATGAACGAGTACCGGATGCTTGCGGTGCGGGCTTTGGAAA
ACGAGGCGCATGATAGAGCGTTTAGAGATGCTATGGACATGAGCTCAACT
TATCAGCAACAACAGCAGCAGTATACCCCCTCACCACATCCCCCTGTTGC
TGTTGCTGCTTCTGAGGATATGGACATGGATGTCGATGGTGATGATTATC
ACAACCCTCAACATGAGGATCATCACGGAACTGGAGAAGGAGAAGGACAA
ATGGTGGTAAGTTCCAACCTCGGCAACGAATAATTCGTCTCCTGTTCGTG
GTGGGGTATGAACAGCATCATTCTCACCATCACTCTACTCATCAGTATCG
TCATCACCAGGCACCTACAGTCCAGTATACAGAAGGAGATACCGAACCAA
TCATAACGACCCGAAGCGGCTGCCTAACCAGCATCATCGGGATGAACAAC
ATAAACCCCATCACCAGACATAGATCTAACCAACACCAACACAATAACAA
TAACAACCACAGTACCCTTACCGAATTCACCATCTACGAAGACCTTTCCC
CCGACCCAGGAGGCCTATTATCCTTCCCTACACAACCAAATCCAGTAGGC
CAACTGCAGCCTGATTACCATCATTATCACTACAACAATCATCATAATAA
CCAAGAAGTACGTGCCTATCATCAAGACTGGGACTCGGATAAAGAGAACA
TCAACAACAACATTGTTGCTGGGCCCCTCCACGATCCGGTTGGAATGATC
ACTGAGACTGAGGCTGAGAGTTTTTCGCAGGTTGTTGATCATTCATATCA
TAATGCTGATAATGTTGCTGACGAGGTTGATGATGAGATGAGAATGGATT
ATGAAGCAGGTGGTAGCGGTGGTGAAAGTGGAAGATGGAGTTCCGGGGTC
CCTCCTTGGAGAGTCGAGTCGGAGTCAGAGTATGCTGATACGGAGGTGGA
TCCTGATGAGGCGGGACTGGGGCTGCAGGACTACGCGCATCGGAGAAGAA
GACGGTATCATCGCTTGAGATGGCAGTCGCGGGTGCTGGGTTCTCAGGAT
AGGGGGTCGGTGGCGTCAAATAGTAGTGTGCTGGTGCCGAGAGTGCTTGG
GGAGGGTTTGCAGGATGGTGCTGGTGCTGGTGGTGCTGGTGCTGGGCGTG
GAAGGCGCGGGTCGAGAAGGTTGTAGGTGTATGCAGTGGATTGGGGAAAG
TCAGGTGTGTGGATAAGGAGACTAAGTTTATTGTGTGCTGG back to topCoding sequence (CDS) from alignment at ch1:2821224..2823164- >KJC3_001108-T1 ID=KJC3_001108-T1|Name=KJC3_001108-T1|organism=Aspergillus niger KJC3|type=CDS|length=4956bp|location=Sequence derived from alignment at ch1:2821224..2823164- (Aspergillus niger KJC3)
GTTGTTGATCATTCATATCATAATGCTGATAATGTTGCTGACGAGGTTGA
TGATGAGATGAGAATGGATTATGAAGCAGGTGGTAGCGGTGGTGAAAGTG
GAAGATGGAGTTCCGGGGTCCCTCCTTGGAGAGTCGAGTCGGAGTCAGAG
TATGCTGATACGGAGGTGGATCCTGATGAGGCGGGACTGGGGCTGCAGGA
CTACGCGCATCGGAGAAGAAGACGGTATCATCGCTTGAGATGGCAGTCGC
GGGTGCTGGGTTCTCAGGATAGGGGGTCGGTGGCGTCAAATAGTAGTGTG
CTGGTGCCGAGAGTGCTTGGGGAGGGTTTGCAGGATGGTGCTGGTGCTGG
TGGTGCTGGTGCTGGGCGTGGAAGGCGCGGGTCGAGAAGGTTGTAGTATC
GTCATCACCAGGCACCTACAGTCCAGTATACAGAAGGAGATACCGAACCA
ATCATAACGACCCGAAGCGGCTGCCTAACCAGCATCATCGGGATGAACAA
CATAAACCCCATCACCAGACATAGATCTAACCAACACCAACACAATAACA
ATAACAACCACAGTACCCTTACCGAATTCACCATCTACGAAGACCTTTCC
CCCGACCCAGGAGGCCTATTATCCTTCCCTACACAACCAAATCCAGTAGG
CCAACTGCAGCCTGATTACCATCATTATCACTACAACAATCATCATAATA
ACCAAGAAACCACAACCGCCATGATCACAACCACCACTCGTAAAAGACGA
GCAGCCTGTGATAATGACAATGGTGACTCCAAAAATACCTCACCAGGCAC
TCTCATCAACACCACTCCCAACGCAACCAACAATGAAACAGGCCATCAAC
CCTTCAAACGCCCTCGTATCCCCTCCCAATTTACCAGACAAGCCGAGCGT
TTCGAAGAAGCCCTGAACAAAGAGATCCAAGAACAGGAAGATGCTCTCCG
CATGAACGAGTACCGGATGCTTGCGGTGCGGGCTTTGGAAAACGAGGCGC
ATGATAGAGCGTTTAGAGATGCTATGGACATGAGCTCAACTTATCAGCAA
CAACAGCAGCAGTATACCCCCTCACCACATCCCCCTGTTGCTGTTGCTGC
TTCTGAGGATATGGACATGGATGTCGATGGTGATGATTATCACAACCCTC
AACATGAGGATCATCACGGAACTGGAGAAGGAGAAGGACAAATGGTGATG
ACCAAAATCATCGACGACAACATGGACCAAGATACGAGTGTTGTTGATCA
TTCATATCATAATGCTGATAATGTTGCTGACGAGGTTGATGATGAGATGA
GAATGGATTATGAAGCAGGTGGTAGCGGTGGTGAAAGTGGAAGATGGAGT
TCCGGGGTCCCTCCTTGGAGAGTCGAGTCGGAGTCAGAGTATGCTGATAC
GGAGGTGGATCCTGATGAGGCGGGACTGGGGCTGCAGGACTACGCGCATC
GGAGAAGAAGACGGTATCATCGCTTGAGATGGCAGTCGCGGGTGCTGGGT
TCTCAGGATAGGGGGTCGGTGGCGTCAAATAGTAGTGTGCTGGTGCCGAG
AGTGCTTGGGGAGGGTTTGCAGGATGGTGCTGGTGCTGGTGGTGCTGGTG
CTGGGCGTGGAAGGCGCGGGTCGAGAAGGTTGTAGTATCGTCATCACCAG
GCACCTACAGTCCAGTATACAGAAGGAGATACCGAACCAATCATAACGAC
CCGAAGCGGCTGCCTAACCAGCATCATCGGGATGAACAACATAAACCCCA
TCACCAGACATAGATCTAACCAACACCAACACAATAACAATAACAACCAC
AGTACCCTTACCGAATTCACCATCTACGAAGACCTTTCCCCCGACCCAGG
AGGCCTATTATCCTTCCCTACACAACCAAATCCAGTAGGCCAACTGCAGC
CTGATTACCATCATTATCACTACAACAATCATCATAATAACCAAGAAACC
ACAACCGCCATGATCACAACCACCACTCGTAAAAGACGAGCAGCCTGTGA
TAATGACAATGGTGACTCCAAAAATACCTCACCAGGCACTCTCATCAACA
CCACTCCCAACGCAACCAACAATGAAACAGGCCATCAACCCTTCAAACGC
CCTCGTATCCCCTCCCAATTTACCAGACAAGCCGAGCGTTTCGAAGAAGC
CCTGAACAAAGAGATCCAAGAACAGGAAGATGCTCTCCGCATGAACGAGT
ACCGGATGCTTGCGGTGCGGGCTTTGGAAAACGAGGCGCATGATAGAGCG
TTTAGAGATGCTATGGACATGAGCTCAACTTATCAGCAACAACAGCAGCA
GTATACCCCCTCACCACATCCCCCTGTTGCTGTTGCTGCTTCTGAGGATA
TGGACATGGATGTCGATGGTGATGATTATCACAACCCTCAACATGAGGAT
CATCACGGAACTGGAGAAGGAGAAGGACAAATGGTGATGACCAAAATCAT
CGACGACAACATGGACCAAGATACGAGTGTTGTTGATCATTCATATCATA
ATGCTGATAATGTTGCTGACGAGGTTGATGATGAGATGAGAATGGATTAT
GAAGCAGGTGGTAGCGGTGGTGAAAGTGGAAGATGGAGTTCCGGGGTCCC
TCCTTGGAGAGTCGAGTCGGAGTCAGAGTATGCTGATACGGAGGTGGATC
CTGATGAGGCGGGACTGGGGCTGCAGGACTACGCGCATCGGAGAAGAAGA
CGGTATCATCGCTTGAGATGGCAGTCGCGGGTGCTGGGTTCTCAGGATAG
GGGGTCGGTGGCGTCAAATAGTAGTGTGCTGGTGCCGAGAGTGCTTGGGG
AGGGTTTGCAGGATGGTGCTGGTGCTGGTGGTGCTGGTGCTGGGCGTGGA
AGGCGCGGGTCGAGAAGGTTGTAGTATCGTCATCACCAGGCACCTACAGT
CCAGTATACAGAAGGAGATACCGAACCAATCATAACGACCCGAAGCGGCT
GCCTAACCAGCATCATCGGGATGAACAACATAAACCCCATCACCAGACAT
AGATCTAACCAACACCAACACAATAACAATAACAACCACAGTACCCTTAC
CGAATTCACCATCTACGAAGACCTTTCCCCCGACCCAGGAGGCCTATTAT
CCTTCCCTACACAACCAAATCCAGTAGGCCAACTGCAGCCTGATTACCAT
CATTATCACTACAACAATCATCATAATAACCAAGAAACCACAACCGCCAT
GATCACAACCACCACTCGTAAAAGACGAGCAGCCTGTGATAATGACAATG
GTGACTCCAAAAATACCTCACCAGGCACTCTCATCAACACCACTCCCAAC
GCAACCAACAATGAAACAGGCCATCAACCCTTCAAACGCCCTCGTATCCC
CTCCCAATTTACCAGACAAGCCGAGCGTTTCGAAGAAGCCCTGAACAAAG
AGATCCAAGAACAGGAAGATGCTCTCCGCATGAACGAGTACCGGATGCTT
GCGGTGCGGGCTTTGGAAAACGAGGCGCATGATAGAGCGTTTAGAGATGC
TATGGACATGAGCTCAACTTATCAGCAACAACAGCAGCAGTATACCCCCT
CACCACATCCCCCTGTTGCTGTTGCTGCTTCTGAGGATATGGACATGGAT
GTCGATGGTGATGATTATCACAACCCTCAACATGAGGATCATCACGGAAC
TGGAGAAGGAGAAGGACAAATGGTGATGACCAAAATCATCGACGACAACA
TGGACCAAGATACGAGTGTTGTTGATCATTCATATCATAATGCTGATAAT
GTTGCTGACGAGGTTGATGATGAGATGAGAATGGATTATGAAGCAGGTGG
TAGCGGTGGTGAAAGTGGAAGATGGAGTTCCGGGGTCCCTCCTTGGAGAG
TCGAGTCGGAGTCAGAGTATGCTGATACGGAGGTGGATCCTGATGAGGCG
GGACTGGGGCTGCAGGACTACGCGCATCGGAGAAGAAGACGGTATCATCG
CTTGAGATGGCAGTCGCGGGTGCTGGGTTCTCAGGATAGGGGGTCGGTGG
CGTCAAATAGTAGTGTGCTGGTGCCGAGAGTGCTTGGGGAGGGTTTGCAG
GATGGTGCTGGTGCTGGTGGTGCTGGTGCTGGGCGTGGAAGGCGCGGGTC
GAGAAGGTTGTAGTATCGTCATCACCAGGCACCTACAGTCCAGTATACAG
AAGGAGATACCGAACCAATCATAACGACCCGAAGCGGCTGCCTAACCAGC
ATCATCGGGATGAACAACATAAACCCCATCACCAGACATAGATCTAACCA
ACACCAACACAATAACAATAACAACCACAGTACCCTTACCGAATTCACCA
TCTACGAAGACCTTTCCCCCGACCCAGGAGGCCTATTATCCTTCCCTACA
CAACCAAATCCAGTAGGCCAACTGCAGCCTGATTACCATCATTATCACTA
CAACAATCATCATAATAACCAAGAAACCACAACCGCCATGATCACAACCA
CCACTCGTAAAAGACGAGCAGCCTGTGATAATGACAATGGTGACTCCAAA
AATACCTCACCAGGCACTCTCATCAACACCACTCCCAACGCAACCAACAA
TGAAACAGGCCATCAACCCTTCAAACGCCCTCGTATCCCCTCCCAATTTA
CCAGACAAGCCGAGCGTTTCGAAGAAGCCCTGAACAAAGAGATCCAAGAA
CAGGAAGATGCTCTCCGCATGAACGAGTACCGGATGCTTGCGGTGCGGGC
TTTGGAAAACGAGGCGCATGATAGAGCGTTTAGAGATGCTATGGACATGA
GCTCAACTTATCAGCAACAACAGCAGCAGTATACCCCCTCACCACATCCC
CCTGTTGCTGTTGCTGCTTCTGAGGATATGGACATGGATGTCGATGGTGA
TGATTATCACAACCCTCAACATGAGGATCATCACGGAACTGGAGAAGGAG
AAGGACAAATGGTGATGACCAAAATCATCGACGACAACATGGACCAAGAT
ACGAGT back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_001108-T1.utr3p1 | KJC3_001108-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch1 | supercontig | ch1:2821224..2823164 - |
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