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KJC3_001113-T1, KJC3_001113-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_001113-T1
Unique NameKJC3_001113-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch1:2833204..2836899-

Legend: CDSpolypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_001113-T1 ID=KJC3_001113-T1|Name=KJC3_001113-T1|organism=Aspergillus niger KJC3|type=mRNA|length=3696bp|location=Sequence derived from alignment at ch1:2833204..2836899- (Aspergillus niger KJC3)
ATGGACGACCTCCAGTCGCTGGAGCTCTTTTCGCTCGTGTCGCGGATCAC
GAGCGAAATCCAGAACCATCTCGGCGTCAACGACAAAACATTAGCGGAAT
TCGTCATCGACCAGCACCTAAAATGCGGCTCATTTGCGGATTTCAGCAAG
AGCATGGAGGAGATGGGCGCGGAGTTCCCTCGGAGTTTGCTGGAGAGTAT
TGATCGTCTGGTGCTCACAATGCATCCGAAGTATAAGTCGAAGAAGATGG
AAACGACGAATACCTCGGCCGGTGATGATGATATGGATGTTCTGGATGCG
TTAGAGAAGAAAGCGCGTGTGTTCAAGGGATTGGCCGTGCCGGATAAGGT
TCAGCAGTGGGATGAGGAGGATGTCGAGGAGGGCGATGCGAAGGCTGATG
CTATGGATGATACGTTTGCTATGCTGGAGGGATTGGCGGGTAAAGCACGT
CAGGAGAAACCTGCCCCGGCGCTGCAGTCATCGTCAAGAAATGACCGCGG
TAGTACTAGGAAGCGCAGCAGAAGCCCCGATTACGATGATCACCGACGTG
GACGCAGACGTCATGATAGATACCGGTCTCGATCGCGATCGCACAGTCCT
CGATATAGCAGGAAGGGTGGTGATGATGAGGTGGATGAATTTGGCCGGTC
AAAGAGTAAATACAGCAGCAGGGATGATTATCGCAATGGACACAGTGAGC
GGAAGAGTCGTCGGGACCGCGATGAGGATGGCGAGTATTTCCGGAAACCG
CCGCCTGTGGAGTTGGATGATCAGCCGGTGCTATACAAGGTCTACGATGG
TCGTGTCACGGGAGTGAAGGACTTTGGCGCCTTTGTGAACTTGCTTGGTG
TGAAAGGCAAGGTGGATGGCTTGGTACATGTTTCGGCTATGCAGGAAGGA
GCGCGTGTTAATCATCCTTCCGATTTGGTATCTCGCGGCCAGCCGGTTAA
GGTCAAGGTGGTTAGCATTCAAGGCTCTCGAATTGGGCTGTCGATGAAGG
AGGTGGATCAGGTTACTGGTCTTGATCTGATCCCTCAACGGCGTCTGGCG
TCCGGCGCAAATATGGAGCGTCTTGACGGCATGACCGGAAAGGACAGATA
TGGTAACCTGAGTTCGGAGGTGCCGGTTATTGAAGAGTCGGATGGAAAGC
CTATGAAAAATAGGAAGCGCATGACCTCTCCTGAGAGATGGGAGATCAAG
CAATTGATTGCATCCGGCGCTGTCTCCGCAGCAGACTATCCTGACATCGA
TGAGGAATACCATGCCACCCTGACAGGCGAAGGCACGTTTGAGGAAGAGG
AGGATGTCGATATTGAAGTCAGGGATGAGGAACCGCCTTTCCTGGCTGGT
CAGACTAAGATGTCTCTGGAACTCTCTCCGATTAGGGTCGTGAAGGCTCC
CGATGGCTCTATGAACCGGGCTGCGATGGCAGGAACTAATCTGGCCAAGG
AGCGACGAGATATCAGGCAGCAGGAAGCTCAGGACAAAGCAGCTGAGCAA
GCTGCGGCGGTCGACCTCAACGCGCAGTGGCAGGACCCCATGGTTGCGCC
TGAAGAGCGGAAATTCGCAGCTGATCTGCGGAGCACCCAGCAGTCCAAGC
CGGACGACTCGGTTCCCGAGTGGAAACGGGTCACGATGGGCAAGAACCAG
TCCTTCGGAAAGCGGACCAGCATGTCCATCAAACAGCAGCGTGAAAGTCT
GCCTGTCTACAAGTTCCGCAAGCAACTTCTCGATGCTGTACGCGACAATC
AGTTGTTGATTGTTGTCGGAGATACTGGGTCCGGAAAGACGACGCAGGTA
ACGCAGTATCTGGCTGAGGGAGGCTATGCAAACAACGGTATTATCGGTTG
TACGCAGCCTCGTCGTGTGGCAGCCATGTCTGTTGCCAAACGTGTGGCTG
AAGAAGTCGGCTGTAAACTCGGCGCGGAGGTTGGATACACGATTCGTTTC
GAAGATTGCACGAGTCCTGATACCAAGATCAAGTACATGACTGATGGTAT
GCTTCAAAGAGAAGTCCTTCTTGACCCGGATTTGAAGAAGTACTCTGTTA
TTATGCTTGACGAAGCTCACGAACGAACCATCGCCACGGATGTTCTCTTC
GGATTGCTCAAAAAGACCATCAAGCGAAGACCGGACCTCAGACTCATTGT
TACTTCGGCTACCCTGGATGCTGAGAAGTTCTCCGAGTACTTCAACGGTT
GCCCTATCTTCTCCATTCCTGGTCGTACGTTCCCTGTCGAGATCATGTAC
TCGAAGGAGCCCGAGTCCGACTATCTTGATGCGGCTCTCATCACAGTTAT
GCAAATTCACCTGACGGAGCCCTCGGGTGATATACTGCTCTTCTTGACAG
GACAAGAAGAAATCGATACTGCCTGCGAGATTCTATACGAGCGGATGAAG
GCTTTAGGGTCAACAGTACCAGAGTTGGTCATTCTTCCTGTCTACTCTGC
TCTTCCGAGTGAAATGCAAAGTAGGATTTTTGAGCCTGCGCCGCCAGGAG
GTAGGAAGGTTGTCATCGCCACAAACATTGCTGAGACATCCATTACCATC
GATAATATCTACTACGTCATCGATCCAGGTTTCGTCAAGCAGAACGCCTA
CGATCCCAAGCTGGGTATGGACTCTCTGGTAGTCACGCCCATCTCGCAGG
CCCAGGCGAAGCAACGTGCTGGCCGTGCAGGAAGAACCGGTCCCGGAAAA
TGCTTCCGGTTGTACACTGAAGCCGCATACCAGTCGGAGATGTTGCCAAC
CACGATCCCCGAAATTCAACGTCAGAACCTGTCACACACTATCCTCATGC
TCAAGGCGATGGGCATCAACGATTTGCTGCACTTCGACTTCATGGATCCT
CCGCCAACGAATACTATGCTTACTGCCTTGGAGGAACTGTATGCACTGTC
TGCTTTAGATGACGAGGGTCTCTTGACTCGCTTGGGCAGAAAGATGGCAG
ACTTCCCCATGGAGCCGGCCCTCGCCAAGGTTCTTATCGCATCGGTCGAC
ATGGGATGCTCGGAGGAGATGCTGAGCATTGTGGCCATGCTTTCCATTCA
GTCGGTCTTCTACCGTCCCAAGGAGAAGCAGCAGCAAGCGGATCAGAAGA
AGGCCAAGTTCCACGATCCCCATGGCGACCATTTGACCCTTCTCAACGTC
TATAACGGATGGAAACACTCCAACTTCAACAATGCCTGGTGCTTCGAGAA
CTTCATCCAGGCACGTCAGATTCGCCGTGCGCAGGACGTCCGTCAGCAGC
TGCTTGGTATCATGGATCGCTACCACCACAAGATCGTCTCTTGCGGAAGA
AACACCCTCAAAGTACGCCAGGCACTTTGTACCGGGTTCTTCCGAAATGC
AGCTCGCAAGGACCCTCAGGAAGGGTACAAGACTCTTGTCGAGGGCACAC
CGGTTTACATGCATCCCAGTTCGGCACTGTTTGGCAAACCCTCCGAGCAC
GTCATCTACCATACTCTTGTTCTTACGACGAAGGAGTACATGCACTGCAC
AACTTCCATCGAGCCCAAATGGCTTGTTGAGGCCGCTCCGACTTTCTTCA
AGGTGGCACCCACCGATCGTCTGTCGAAACGTAAGAAGGCCGAGCGGATT
CAGCCTCTCCACAACCGCTTTGCCGGCGAGGATGATTGGCGTCTATCCGC
ACAGAGACGGCAGGGCCGTGGTGGAGGTGGTGGTACCTGGGGTTGA
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Coding sequence (CDS) from alignment at ch1:2833204..2836899-

>KJC3_001113-T1 ID=KJC3_001113-T1|Name=KJC3_001113-T1|organism=Aspergillus niger KJC3|type=CDS|length=3696bp|location=Sequence derived from alignment at ch1:2833204..2836899- (Aspergillus niger KJC3)
ATGGACGACCTCCAGTCGCTGGAGCTCTTTTCGCTCGTGTCGCGGATCAC
GAGCGAAATCCAGAACCATCTCGGCGTCAACGACAAAACATTAGCGGAAT
TCGTCATCGACCAGCACCTAAAATGCGGCTCATTTGCGGATTTCAGCAAG
AGCATGGAGGAGATGGGCGCGGAGTTCCCTCGGAGTTTGCTGGAGAGTAT
TGATCGTCTGGTGCTCACAATGCATCCGAAGTATAAGTCGAAGAAGATGG
AAACGACGAATACCTCGGCCGGTGATGATGATATGGATGTTCTGGATGCG
TTAGAGAAGAAAGCGCGTGTGTTCAAGGGATTGGCCGTGCCGGATAAGGT
TCAGCAGTGGGATGAGGAGGATGTCGAGGAGGGCGATGCGAAGGCTGATG
CTATGGATGATACGTTTGCTATGCTGGAGGGATTGGCGGGTAAAGCACGT
CAGGAGAAACCTGCCCCGGCGCTGCAGTCATCGTCAAGAAATGACCGCGG
TAGTACTAGGAAGCGCAGCAGAAGCCCCGATTACGATGATCACCGACGTG
GACGCAGACGTCATGATAGATACCGGTCTCGATCGCGATCGCACAGTCCT
CGATATAGCAGGAAGGGTGGTGATGATGAGGTGGATGAATTTGGCCGGTC
AAAGAGTAAATACAGCAGCAGGGATGATTATCGCAATGGACACAGTGAGC
GGAAGAGTCGTCGGGACCGCGATGAGGATGGCGAGTATTTCCGGAAACCG
CCGCCTGTGGAGTTGGATGATCAGCCGGTGCTATACAAGGTCTACGATGG
TCGTGTCACGGGAGTGAAGGACTTTGGCGCCTTTGTGAACTTGCTTGGTG
TGAAAGGCAAGGTGGATGGCTTGGTACATGTTTCGGCTATGCAGGAAGGA
GCGCGTGTTAATCATCCTTCCGATTTGGTATCTCGCGGCCAGCCGGTTAA
GGTCAAGGTGGTTAGCATTCAAGGCTCTCGAATTGGGCTGTCGATGAAGG
AGGTGGATCAGGTTACTGGTCTTGATCTGATCCCTCAACGGCGTCTGGCG
TCCGGCGCAAATATGGAGCGTCTTGACGGCATGACCGGAAAGGACAGATA
TGGTAACCTGAGTTCGGAGGTGCCGGTTATTGAAGAGTCGGATGGAAAGC
CTATGAAAAATAGGAAGCGCATGACCTCTCCTGAGAGATGGGAGATCAAG
CAATTGATTGCATCCGGCGCTGTCTCCGCAGCAGACTATCCTGACATCGA
TGAGGAATACCATGCCACCCTGACAGGCGAAGGCACGTTTGAGGAAGAGG
AGGATGTCGATATTGAAGTCAGGGATGAGGAACCGCCTTTCCTGGCTGGT
CAGACTAAGATGTCTCTGGAACTCTCTCCGATTAGGGTCGTGAAGGCTCC
CGATGGCTCTATGAACCGGGCTGCGATGGCAGGAACTAATCTGGCCAAGG
AGCGACGAGATATCAGGCAGCAGGAAGCTCAGGACAAAGCAGCTGAGCAA
GCTGCGGCGGTCGACCTCAACGCGCAGTGGCAGGACCCCATGGTTGCGCC
TGAAGAGCGGAAATTCGCAGCTGATCTGCGGAGCACCCAGCAGTCCAAGC
CGGACGACTCGGTTCCCGAGTGGAAACGGGTCACGATGGGCAAGAACCAG
TCCTTCGGAAAGCGGACCAGCATGTCCATCAAACAGCAGCGTGAAAGTCT
GCCTGTCTACAAGTTCCGCAAGCAACTTCTCGATGCTGTACGCGACAATC
AGTTGTTGATTGTTGTCGGAGATACTGGGTCCGGAAAGACGACGCAGGTA
ACGCAGTATCTGGCTGAGGGAGGCTATGCAAACAACGGTATTATCGGTTG
TACGCAGCCTCGTCGTGTGGCAGCCATGTCTGTTGCCAAACGTGTGGCTG
AAGAAGTCGGCTGTAAACTCGGCGCGGAGGTTGGATACACGATTCGTTTC
GAAGATTGCACGAGTCCTGATACCAAGATCAAGTACATGACTGATGGTAT
GCTTCAAAGAGAAGTCCTTCTTGACCCGGATTTGAAGAAGTACTCTGTTA
TTATGCTTGACGAAGCTCACGAACGAACCATCGCCACGGATGTTCTCTTC
GGATTGCTCAAAAAGACCATCAAGCGAAGACCGGACCTCAGACTCATTGT
TACTTCGGCTACCCTGGATGCTGAGAAGTTCTCCGAGTACTTCAACGGTT
GCCCTATCTTCTCCATTCCTGGTCGTACGTTCCCTGTCGAGATCATGTAC
TCGAAGGAGCCCGAGTCCGACTATCTTGATGCGGCTCTCATCACAGTTAT
GCAAATTCACCTGACGGAGCCCTCGGGTGATATACTGCTCTTCTTGACAG
GACAAGAAGAAATCGATACTGCCTGCGAGATTCTATACGAGCGGATGAAG
GCTTTAGGGTCAACAGTACCAGAGTTGGTCATTCTTCCTGTCTACTCTGC
TCTTCCGAGTGAAATGCAAAGTAGGATTTTTGAGCCTGCGCCGCCAGGAG
GTAGGAAGGTTGTCATCGCCACAAACATTGCTGAGACATCCATTACCATC
GATAATATCTACTACGTCATCGATCCAGGTTTCGTCAAGCAGAACGCCTA
CGATCCCAAGCTGGGTATGGACTCTCTGGTAGTCACGCCCATCTCGCAGG
CCCAGGCGAAGCAACGTGCTGGCCGTGCAGGAAGAACCGGTCCCGGAAAA
TGCTTCCGGTTGTACACTGAAGCCGCATACCAGTCGGAGATGTTGCCAAC
CACGATCCCCGAAATTCAACGTCAGAACCTGTCACACACTATCCTCATGC
TCAAGGCGATGGGCATCAACGATTTGCTGCACTTCGACTTCATGGATCCT
CCGCCAACGAATACTATGCTTACTGCCTTGGAGGAACTGTATGCACTGTC
TGCTTTAGATGACGAGGGTCTCTTGACTCGCTTGGGCAGAAAGATGGCAG
ACTTCCCCATGGAGCCGGCCCTCGCCAAGGTTCTTATCGCATCGGTCGAC
ATGGGATGCTCGGAGGAGATGCTGAGCATTGTGGCCATGCTTTCCATTCA
GTCGGTCTTCTACCGTCCCAAGGAGAAGCAGCAGCAAGCGGATCAGAAGA
AGGCCAAGTTCCACGATCCCCATGGCGACCATTTGACCCTTCTCAACGTC
TATAACGGATGGAAACACTCCAACTTCAACAATGCCTGGTGCTTCGAGAA
CTTCATCCAGGCACGTCAGATTCGCCGTGCGCAGGACGTCCGTCAGCAGC
TGCTTGGTATCATGGATCGCTACCACCACAAGATCGTCTCTTGCGGAAGA
AACACCCTCAAAGTACGCCAGGCACTTTGTACCGGGTTCTTCCGAAATGC
AGCTCGCAAGGACCCTCAGGAAGGGTACAAGACTCTTGTCGAGGGCACAC
CGGTTTACATGCATCCCAGTTCGGCACTGTTTGGCAAACCCTCCGAGCAC
GTCATCTACCATACTCTTGTTCTTACGACGAAGGAGTACATGCACTGCAC
AACTTCCATCGAGCCCAAATGGCTTGTTGAGGCCGCTCCGACTTTCTTCA
AGGTGGCACCCACCGATCGTCTGTCGAAACGTAAGAAGGCCGAGCGGATT
CAGCCTCTCCACAACCGCTTTGCCGGCGAGGATGATTGGCGTCTATCCGC
ACAGAGACGGCAGGGCCGTGGTGGAGGTGGTGGTACCTGGGGTTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO:0004386helicase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_001113KJC3_001113Aspergillus niger KJC3gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001113-T1.cdsKJC3_001113-T1.cdsAspergillus niger KJC3CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001113-T1.exon1KJC3_001113-T1.exon1Aspergillus niger KJC3exon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001113-T1KJC3_001113-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR027417
DBxrefInterPro:IPR012340
DBxrefInterPro:IPR002464
DBxrefInterPro:IPR003029
DBxrefInterPro:IPR011709
DBxrefInterPro:IPR014001
DBxrefInterPro:IPR007502
DBxrefInterPro:IPR022967
DBxrefInterPro:IPR001650
DBxrefPFAM:PF00575
DBxrefPFAM:PF07717
DBxrefPFAM:PF00271
DBxrefPFAM:PF04408
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch1supercontigch1:2833204..2836899 -
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