You are here

Home

KJC3_001121-T1, KJC3_001121-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_001121-T1
Unique NameKJC3_001121-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch1:2852122..2854153-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_001121-T1 ID=KJC3_001121-T1|Name=KJC3_001121-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2032bp|location=Sequence derived from alignment at ch1:2852122..2854153- (Aspergillus niger KJC3)
AACAAAATTGCATCCCTCATTCTGGGTGCTTTCTCATAAAAGGTAGACCT
TGGGACCTGAGCTCGCCCAGTGAAAGCTGAATGAAGTCGAGTTGATGACT
CTGAGCCCATCCAACTATACACGCCCTCGCTTAGCGATCTACTTACTTCT
ACTTTTGATCATGCTGGAAAATGCCCTACGGTCTCTTCAGAATCACTGAC
AGTTCTTGACAAGTACAGCCATCATGGATCTCTTGGGGTGTGTAGTCATC
GCCGTCGCTGGCTACATTATCTACCAAGTTTGGTTCCATCCACTGTCCTC
CTATCCTGGCCCATTCGTCGCCAAGCTGACCAATCTCTACTCGGTGGTTC
ACGCCATACGCGGCGATCGCCATGAGGACCTATATCATCTGCACCAACGC
TATGGTCCCGTTGTGCGAGTCGGCCCGCGGCGCGTTTCTATTCTTGATGC
AAAGGCGCTGGAGCCCATCTACGGCTTCCATGCCAACGTTCAGAAAGCCA
AGTCGTACAACATCTTCTATGGCGTGAGCATCTTCAATGCCATCGATCGC
ACAGTGCATGCTCGCAAACGTCGAGTCATGTCTCATGCCTTTTCCAGCCA
GGCACTACGTGGCATGGAACCCCATATCTTGTCAGCCATTCGCGACTGGT
GTGCCGCCCTAGGTGATCAACATCCCGATAAGCAGGTGCTATCTGCATGT
TCCCGTCCTGGAAGCTGGTCAAGGCCCAAAAATATGGTGCACTGGAGTGC
CTGTGTGGTCTTCGATGCGCTTGGGGAGATCTGCTTCGGCAAGACATTCA
ACACCTCTTTCAGCGACGCCAACCACTTCTTCTTCCCGTTGATGGCCTTG
AACCTCCGTATCATGAACATCTGTGGGCAGATGCCTATTCTATGCTCCCT
GGGTTTGGAAAGGTATCTTCGGCGCGGTACTGTCGCCAACCGCCAGCGAC
AGATTGATTTCTCCCGGCAGCAGTTGCAGACTCGGCTCGCCGCAGAGTCC
ACCCAGCGTCGAGATATCATCTTCTATCTGCAGCAAGCACGGGACCCGAA
GACCAATGAAGGCTATTCTGAGGCGGAACTGATGTCAGAGGTTATGACGC
TGCTAGGAGCCGGTATGTACACAAATTCGTTCCAAGCGTGATTTGCCCCG
TTTTATATCCTTTGCTGAGACTCACCGGCTGAACTATCAGGTAACGACAC
AACCAATACGACATTAACTGCCATCTTCTACTATCTTGCTCATAACCCAG
CGATCCTCGCCCGTCTGAGCGCAGAGATTCGTGCTGTCTTCCCTACACTG
GAGGCGATCGTTGCCGGTCCCGATCTGTCGCAGATGGCTTACCTTCACGC
TTGTATCGATGAGACCATGCGTGTATGCCCGCCTGTACCTACTGATCTGC
CACGAGAAGTCCTCCCTGGAGGGCTTCGGGTGGGAGAGTGGTATTTCCCG
GCCGGCACGGTTGTCGCAGTTCCCACCTACGCGTTGCACCACAGTGAAGA
CCACTTCTACCGCGCCTTTGTGTACGATCCGAGTCGGTGGCTACTGTGTG
GCAGCAAAGGCACTGAGCAAGGAGAGGGGGTGAGTGCTGAGGTGCTCAGT
CGGCAGCGGCAGGCCTTTGCACCTTTTAGTATGGGACCGCGGGCGTGCAT
TGGGCGGAATGTAGCCATTCTCGAGCTCGAGCTGACTATTTCCCGGGCAT
TGTGGTTGTATGATATACGACTGGCACCGGGAACGGAGCAATTGGGCGTC
GGCTACCAAGGCGAATACAAGATCAAGGACCATTTCGCAGTTGGGAAGGA
GGGCCCTGTGTTGCAATTCCGGATGCGACAGAAATGAGCGTTTCTTGATC
GTTTCTCGGGCGGAGTTTATGGTCCGCTTAAAAACCAGGACATTTCCCAT
TCCATCATGGTTCTTAGTCAAGGTTCCTGAAGCATGTGTACTAACAATCA
CTGGTACTCTCAATTGTGTCTCGCCTCTATCGGGGTCTCATGATATTATC
GAACTATATCTATATCCCCAAACAGCAGTCAA
back to top

Coding sequence (CDS) from alignment at ch1:2852122..2854153-

>KJC3_001121-T1 ID=KJC3_001121-T1|Name=KJC3_001121-T1|organism=Aspergillus niger KJC3|type=CDS|length=3072bp|location=Sequence derived from alignment at ch1:2852122..2854153- (Aspergillus niger KJC3)
GTAACGACACAACCAATACGACATTAACTGCCATCTTCTACTATCTTGCT
CATAACCCAGCGATCCTCGCCCGTCTGAGCGCAGAGATTCGTGCTGTCTT
CCCTACACTGGAGGCGATCGTTGCCGGTCCCGATCTGTCGCAGATGGCTT
ACCTTCACGCTTGTATCGATGAGACCATGCGTGTATGCCCGCCTGTACCT
ACTGATCTGCCACGAGAAGTCCTCCCTGGAGGGCTTCGGGTGGGAGAGTG
GTATTTCCCGGCCGGCACGGTTGTCGCAGTTCCCACCTACGCGTTGCACC
ACAGTGAAGACCACTTCTACCGCGCCTTTGTGTACGATCCGAGTCGGTGG
CTACTGTGTGGCAGCAAAGGCACTGAGCAAGGAGAGGGGGTGAGTGCTGA
GGTGCTCAGTCGGCAGCGGCAGGCCTTTGCACCTTTTAGTATGGGACCGC
GGGCGTGCATTGGGCGGAATGTAGCCATTCTCGAGCTCGAGCTGACTATT
TCCCGGGCATTGTGGTTGTATGATATACGACTGGCACCGGGAACGGAGCA
ATTGGGCGTCGGCTACCAAGGCGAATACAAGATCAAGGACCATTTCGCAG
TTGGGAAGGAGGGCCCTGTGTTGCAATTCCGGATGCGACAGAAATGAATG
GATCTCTTGGGGTGTGTAGTCATCGCCGTCGCTGGCTACATTATCTACCA
AGTTTGGTTCCATCCACTGTCCTCCTATCCTGGCCCATTCGTCGCCAAGC
TGACCAATCTCTACTCGGTGGTTCACGCCATACGCGGCGATCGCCATGAG
GACCTATATCATCTGCACCAACGCTATGGTCCCGTTGTGCGAGTCGGCCC
GCGGCGCGTTTCTATTCTTGATGCAAAGGCGCTGGAGCCCATCTACGGCT
TCCATGCCAACGTTCAGAAAGCCAAGTCGTACAACATCTTCTATGGCGTG
AGCATCTTCAATGCCATCGATCGCACAGTGCATGCTCGCAAACGTCGAGT
CATGTCTCATGCCTTTTCCAGCCAGGCACTACGTGGCATGGAACCCCATA
TCTTGTCAGCCATTCGCGACTGGTGTGCCGCCCTAGGTGATCAACATCCC
GATAAGCAGGTGCTATCTGCATGTTCCCGTCCTGGAAGCTGGTCAAGGCC
CAAAAATATGGTGCACTGGAGTGCCTGTGTGGTCTTCGATGCGCTTGGGG
AGATCTGCTTCGGCAAGACATTCAACACCTCTTTCAGCGACGCCAACCAC
TTCTTCTTCCCGTTGATGGCCTTGAACCTCCGTATCATGAACATCTGTGG
GCAGATGCCTATTCTATGCTCCCTGGGTTTGGAAAGGTATCTTCGGCGCG
GTACTGTCGCCAACCGCCAGCGACAGATTGATTTCTCCCGGCAGCAGTTG
CAGACTCGGCTCGCCGCAGAGTCCACCCAGCGTCGAGATATCATCTTCTA
TCTGCAGCAAGCACGGGACCCGAAGACCAATGAAGGCTATTCTGAGGCGG
AACTGATGTCAGAGGTTATGACGCTGCTAGGAGCCGGTAACGACACAACC
AATACGACATTAACTGCCATCTTCTACTATCTTGCTCATAACCCAGCGAT
CCTCGCCCGTCTGAGCGCAGAGATTCGTGCTGTCTTCCCTACACTGGAGG
CGATCGTTGCCGGTCCCGATCTGTCGCAGATGGCTTACCTTCACGCTTGT
ATCGATGAGACCATGCGTGTATGCCCGCCTGTACCTACTGATCTGCCACG
AGAAGTCCTCCCTGGAGGGCTTCGGGTGGGAGAGTGGTATTTCCCGGCCG
GCACGGTTGTCGCAGTTCCCACCTACGCGTTGCACCACAGTGAAGACCAC
TTCTACCGCGCCTTTGTGTACGATCCGAGTCGGTGGCTACTGTGTGGCAG
CAAAGGCACTGAGCAAGGAGAGGGGGTGAGTGCTGAGGTGCTCAGTCGGC
AGCGGCAGGCCTTTGCACCTTTTAGTATGGGACCGCGGGCGTGCATTGGG
CGGAATGTAGCCATTCTCGAGCTCGAGCTGACTATTTCCCGGGCATTGTG
GTTGTATGATATACGACTGGCACCGGGAACGGAGCAATTGGGCGTCGGCT
ACCAAGGCGAATACAAGATCAAGGACCATTTCGCAGTTGGGAAGGAGGGC
CCTGTGTTGCAATTCCGGATGCGACAGAAATGAATGGATCTCTTGGGGTG
TGTAGTCATCGCCGTCGCTGGCTACATTATCTACCAAGTTTGGTTCCATC
CACTGTCCTCCTATCCTGGCCCATTCGTCGCCAAGCTGACCAATCTCTAC
TCGGTGGTTCACGCCATACGCGGCGATCGCCATGAGGACCTATATCATCT
GCACCAACGCTATGGTCCCGTTGTGCGAGTCGGCCCGCGGCGCGTTTCTA
TTCTTGATGCAAAGGCGCTGGAGCCCATCTACGGCTTCCATGCCAACGTT
CAGAAAGCCAAGTCGTACAACATCTTCTATGGCGTGAGCATCTTCAATGC
CATCGATCGCACAGTGCATGCTCGCAAACGTCGAGTCATGTCTCATGCCT
TTTCCAGCCAGGCACTACGTGGCATGGAACCCCATATCTTGTCAGCCATT
CGCGACTGGTGTGCCGCCCTAGGTGATCAACATCCCGATAAGCAGGTGCT
ATCTGCATGTTCCCGTCCTGGAAGCTGGTCAAGGCCCAAAAATATGGTGC
ACTGGAGTGCCTGTGTGGTCTTCGATGCGCTTGGGGAGATCTGCTTCGGC
AAGACATTCAACACCTCTTTCAGCGACGCCAACCACTTCTTCTTCCCGTT
GATGGCCTTGAACCTCCGTATCATGAACATCTGTGGGCAGATGCCTATTC
TATGCTCCCTGGGTTTGGAAAGGTATCTTCGGCGCGGTACTGTCGCCAAC
CGCCAGCGACAGATTGATTTCTCCCGGCAGCAGTTGCAGACTCGGCTCGC
CGCAGAGTCCACCCAGCGTCGAGATATCATCTTCTATCTGCAGCAAGCAC
GGGACCCGAAGACCAATGAAGGCTATTCTGAGGCGGAACTGATGTCAGAG
GTTATGACGCTGCTAGGAGCCG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0055114oxidation-reduction process
Vocabulary: Molecular Function
TermDefinition
GO:0020037heme binding
GO:0005506iron ion binding
GO:0016705oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_001121KJC3_001121Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001121-T1KJC3_001121-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001121-T1.cdsKJC3_001121-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001121-T1.utr3p1KJC3_001121-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001121-T1.exon2KJC3_001121-T1.exon2Aspergillus niger KJC3exon
KJC3_001121-T1.exon1KJC3_001121-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001121-T1.utr5p1KJC3_001121-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR017972
DBxrefInterPro:IPR036396
DBxrefInterPro:IPR002401
DBxrefInterPro:IPR001128
DBxrefPFAM:PF00067
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch1supercontigch1:2852122..2854153 -
Powered by Drupal