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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch1:2855741..2858520- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_001122-T1 ID=KJC3_001122-T1|Name=KJC3_001122-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2780bp|location=Sequence derived from alignment at ch1:2855741..2858520- (Aspergillus niger KJC3) GCCGCGGTGGTAATTCTCGCCCTCTTCCTACACCCACTGCCTCCCCCCAC
CCCCCGCTTCCCCCGAAGATGTCCTTCTTCGGTTTCAATACCACCCTGCC
TAGGGATCGAGCTCCTGCGGGCGAACAGAGGGGTATCTTCGACACCCCTG
ATCCGTTCGCCGAAGTCGCCCGCGCCAGACTGGCAGCAAACTTCCAAAGC
GGCGAGGATGACGACGTGTAAGTTTCCCTCACTTTGCCTCAATGAATTCA
ATTGAGACAACTCGGGGGGCATATCGCTGACCAGTGGCTTTTTCTTTGAT
CACTATAGCATCGACTTTGAGGATACGTACGACGGCCTGGGAGACCAACT
GGACGATGACCAGGATGCGTTCAACGATGACACGTTTGGTGGCGGCTTCG
ACACCGGCCCGGTTGGAAAGGATTTCGACTTCTTCGGAAAGACTGCTCAG
GTCGCCGATGTAATCGGGGAGGAGCAGATCCGCTACAGCCTTCAGAAACC
CGGTGCGCCTGCGACCGCGCCTTCGCAGCCCAGCGCCGATACTGCTCTGC
CGGACACTACGGCCCAGAAGCCCAAACGGTCTGGCTATGAGAAGTACAAC
GACCCGGGTTACATCCCCGACCTTCAGGCCAAGTCTAGCGTCTGGGGCAT
GTCGAAGAAGCCGGAACAGCAGCTCCAGCAACAGCAGCTCCAGCAACAGC
TACAACAGCTACAACAGCTACAGCAGCCCACGCCTCAGATGGTAGCGCAA
GCGAAGAAGATGCTGAGTCTCGAGGAGGTGGAAGCGCAGCTGCGGAGACA
GGGTCCGACTTCGCTGCCCGCCCAAATCCCGCTGTCCCTTCCGCAGTCGA
TGCCAGAGCCCACTCAGCCTCTCCAGCGAGCTCAGATGCCCCCTCTGCCC
GAAGGCTTCCCGCAGCTGCCGCCTGAGATTCTACAGGCCCAGTTCGCCAA
GGGAGTGCCACCGGCGCAGTTGTTGCACCAGCCACCCATGGTTCCAGAGC
CGTATCCGCTTCCTCCAAATCTGCCGATACATATGCTGCAAAATGCCAAC
TTGCCGCCTCAGCACATGGTGCCTCCCCAACGTCAGGCGATGCCACCGGC
GGCTCAGCGACCCCAGCAGCAGCAACCGCCCCTACCTCAAGCTCCCCGTG
GTAACAACGCGCAATTGCCAGTGATTACCAACTCTCAGCAGTTGATGCAC
CTGACGGAAGAGCAGCGCGTAGCGTACCTGATGGAAGATGCCAAGCGTGC
GAAGCGCAATCACAAGATCTTTCTTCTATCCAGGGGCAACGGGCTGATGA
CCCCGCAAGACAAGAACTTCATCACCCGAATCCAGCTTCAGCAACTAGTC
GCTGCTGCTGGCAACGTGGCGGACTCTGATGCAGAAGCGGTCTTGGCAGA
GGACTTCTACTATCAGGTTTACAGCCAGATCCGGGGTGCGCCGCGGCAAC
ACCCACACCAACCTCTCGGTCACTTTGCGCAGACATACCTCCTCCAGACA
GGCAACAGACTCGGGGGCCATGGCTCTCGCCGGCAGTTTCAGAGCGCCGA
CAATCACATGCAGAGAATGCAGCAGCAGGTCCAGCGTGCGGTGGAGGCCG
CTAAGCAGAAGCCTAAGAACAAGCAGCTTATCATTGAGGGCAGCTTGGGT
AAGATTTCTTTCAGCAACGCCAAGACGCCAAAGCCCATGCTCAACATCAA
GCGTCCGGAGAGCTCGGAAGGCGCTAAGACGGTGAAAAAGCCTCACACCG
ATTTGAGTGTTAGCGACCGCAAATCAGTCCTGACCAACCTTGAGAGCGTT
TACAGCACGCTTATGGATATGGAGGACATGGAGCGCACGATGCCTCCCCC
GCCAGATGAGAATGATCCCGAGGCCATTCAGAAGCACATGGAATGGAGAC
AGAAGATCCGCTCGCTCAACCAGAAGTTGTGGCGCGACCTTAAGGTCATG
GAACCCATTGTCCCCAACACCAACACTCCCCATCCGTTCATTGCCTTCCT
TGCTTATCCCAAGGGCAAGAAGGCCATCCCCCGCATTTTCCGCCACATTG
ATCAGGAGCAGCGTGTTACTATTCTTACTATGATCGTTGTGCACTTGGAT
TCTCTGGACGTCGTCCGGCGCGCCCAGCCTGTTCCGGGTGAGACCCAGCC
CTCTCTGGCCGTTCGGGAAGCCATTGAGCTTTTCTCTCAGGCCGTCATGC
CCAGTCTTCTGGGGTACGTCAACGAGGCGCCATTCAATATTATCATTGGC
TTGCTGGGACTTGTCATTGCGCAGACGCATGTCCAGATGATCGCGAGGAC
CCGCATTGGACTTGGAATCTTGACCATGCTTCTCAGTCGGGCCGAAATCG
TGAAGGAGGCTGGACAGGCTACGGAGCGGGACTGGCAGCAGTGGGTTGAG
AAGTTCAATGTGCTGTTTGACACCCTTGAACCTACGTTTGCAGATATCTT
CCCCAGCTCGATCAATGCTGGCGACGACATGTATGTGTGGCAGTTCTTGG
CTGCAGTTGGTATCGGAGCTAGCCCCGAACAACAGCAACGCCTTGTTATT
GCGGTTAAGTAAGTGCAACCTCTCGTTTACAATTATTTACATTGATACTA
ACCGTTCTACCAGGGACCGGGTGATGGAGACGGTGACTTACAGCAAGACG
CTTCCTGCCGATATGGCCAGTGCGCGTCTTGGCAACGTCAACCTTTTCAT
GCGGGCTATTGGCCTCGATGTCGAACTTCTAGGTTAAATGACGGGGGACG
ATCTCCACGAGATACTTCTTTCGCTGCCCA back to topCoding sequence (CDS) from alignment at ch1:2855741..2858520- >KJC3_001122-T1 ID=KJC3_001122-T1|Name=KJC3_001122-T1|organism=Aspergillus niger KJC3|type=CDS|length=7569bp|location=Sequence derived from alignment at ch1:2855741..2858520- (Aspergillus niger KJC3) GGACCGGGTGATGGAGACGGTGACTTACAGCAAGACGCTTCCTGCCGATA TGGCCAGTGCGCGTCTTGGCAACGTCAACCTTTTCATGCGGGCTATTGGC CTCGATGTCGAACTTCTAGGTTAACATCGACTTTGAGGATACGTACGACG GCCTGGGAGACCAACTGGACGATGACCAGGATGCGTTCAACGATGACACG TTTGGTGGCGGCTTCGACACCGGCCCGGTTGGAAAGGATTTCGACTTCTT CGGAAAGACTGCTCAGGTCGCCGATGTAATCGGGGAGGAGCAGATCCGCT ACAGCCTTCAGAAACCCGGTGCGCCTGCGACCGCGCCTTCGCAGCCCAGC GCCGATACTGCTCTGCCGGACACTACGGCCCAGAAGCCCAAACGGTCTGG CTATGAGAAGTACAACGACCCGGGTTACATCCCCGACCTTCAGGCCAAGT CTAGCGTCTGGGGCATGTCGAAGAAGCCGGAACAGCAGCTCCAGCAACAG CAGCTCCAGCAACAGCTACAACAGCTACAACAGCTACAGCAGCCCACGCC TCAGATGGTAGCGCAAGCGAAGAAGATGCTGAGTCTCGAGGAGGTGGAAG CGCAGCTGCGGAGACAGGGTCCGACTTCGCTGCCCGCCCAAATCCCGCTG TCCCTTCCGCAGTCGATGCCAGAGCCCACTCAGCCTCTCCAGCGAGCTCA GATGCCCCCTCTGCCCGAAGGCTTCCCGCAGCTGCCGCCTGAGATTCTAC AGGCCCAGTTCGCCAAGGGAGTGCCACCGGCGCAGTTGTTGCACCAGCCA CCCATGGTTCCAGAGCCGTATCCGCTTCCTCCAAATCTGCCGATACATAT GCTGCAAAATGCCAACTTGCCGCCTCAGCACATGGTGCCTCCCCAACGTC AGGCGATGCCACCGGCGGCTCAGCGACCCCAGCAGCAGCAACCGCCCCTA CCTCAAGCTCCCCGTGGTAACAACGCGCAATTGCCAGTGATTACCAACTC TCAGCAGTTGATGCACCTGACGGAAGAGCAGCGCGTAGCGTACCTGATGG AAGATGCCAAGCGTGCGAAGCGCAATCACAAGATCTTTCTTCTATCCAGG GGCAACGGGCTGATGACCCCGCAAGACAAGAACTTCATCACCCGAATCCA GCTTCAGCAACTAGTCGCTGCTGCTGGCAACGTGGCGGACTCTGATGCAG AAGCGGTCTTGGCAGAGGACTTCTACTATCAGGTTTACAGCCAGATCCGG GGTGCGCCGCGGCAACACCCACACCAACCTCTCGGTCACTTTGCGCAGAC ATACCTCCTCCAGACAGGCAACAGACTCGGGGGCCATGGCTCTCGCCGGC AGTTTCAGAGCGCCGACAATCACATGCAGAGAATGCAGCAGCAGGTCCAG CGTGCGGTGGAGGCCGCTAAGCAGAAGCCTAAGAACAAGCAGCTTATCAT TGAGGGCAGCTTGGGTAAGATTTCTTTCAGCAACGCCAAGACGCCAAAGC CCATGCTCAACATCAAGCGTCCGGAGAGCTCGGAAGGCGCTAAGACGGTG AAAAAGCCTCACACCGATTTGAGTGTTAGCGACCGCAAATCAGTCCTGAC CAACCTTGAGAGCGTTTACAGCACGCTTATGGATATGGAGGACATGGAGC GCACGATGCCTCCCCCGCCAGATGAGAATGATCCCGAGGCCATTCAGAAG CACATGGAATGGAGACAGAAGATCCGCTCGCTCAACCAGAAGTTGTGGCG CGACCTTAAGGTCATGGAACCCATTGTCCCCAACACCAACACTCCCCATC CGTTCATTGCCTTCCTTGCTTATCCCAAGGGCAAGAAGGCCATCCCCCGC ATTTTCCGCCACATTGATCAGGAGCAGCGTGTTACTATTCTTACTATGAT CGTTGTGCACTTGGATTCTCTGGACGTCGTCCGGCGCGCCCAGCCTGTTC CGGGTGAGACCCAGCCCTCTCTGGCCGTTCGGGAAGCCATTGAGCTTTTC TCTCAGGCCGTCATGCCCAGTCTTCTGGGGTACGTCAACGAGGCGCCATT CAATATTATCATTGGCTTGCTGGGACTTGTCATTGCGCAGACGCATGTCC AGATGATCGCGAGGACCCGCATTGGACTTGGAATCTTGACCATGCTTCTC AGTCGGGCCGAAATCGTGAAGGAGGCTGGACAGGCTACGGAGCGGGACTG GCAGCAGTGGGTTGAGAAGTTCAATGTGCTGTTTGACACCCTTGAACCTA CGTTTGCAGATATCTTCCCCAGCTCGATCAATGCTGGCGACGACATGTAT GTGTGGCAGTTCTTGGCTGCAGTTGGTATCGGAGCTAGCCCCGAACAACA GCAACGCCTTGTTATTGCGGTTAAATGTCCTTCTTCGGTTTCAATACCAC CCTGCCTAGGGATCGAGCTCCTGCGGGCGAACAGAGGGGTATCTTCGACA CCCCTGATCCGTTCGCCGAAGTCGCCCGCGCCAGACTGGCAGCAAACTTC CAAAGCGGCGAGGATGACGACGTGGACCGGGTGATGGAGACGGTGACTTA CAGCAAGACGCTTCCTGCCGATATGGCCAGTGCGCGTCTTGGCAACGTCA ACCTTTTCATGCGGGCTATTGGCCTCGATGTCGAACTTCTAGGTTAACAT CGACTTTGAGGATACGTACGACGGCCTGGGAGACCAACTGGACGATGACC AGGATGCGTTCAACGATGACACGTTTGGTGGCGGCTTCGACACCGGCCCG GTTGGAAAGGATTTCGACTTCTTCGGAAAGACTGCTCAGGTCGCCGATGT AATCGGGGAGGAGCAGATCCGCTACAGCCTTCAGAAACCCGGTGCGCCTG CGACCGCGCCTTCGCAGCCCAGCGCCGATACTGCTCTGCCGGACACTACG GCCCAGAAGCCCAAACGGTCTGGCTATGAGAAGTACAACGACCCGGGTTA CATCCCCGACCTTCAGGCCAAGTCTAGCGTCTGGGGCATGTCGAAGAAGC CGGAACAGCAGCTCCAGCAACAGCAGCTCCAGCAACAGCTACAACAGCTA CAACAGCTACAGCAGCCCACGCCTCAGATGGTAGCGCAAGCGAAGAAGAT GCTGAGTCTCGAGGAGGTGGAAGCGCAGCTGCGGAGACAGGGTCCGACTT CGCTGCCCGCCCAAATCCCGCTGTCCCTTCCGCAGTCGATGCCAGAGCCC ACTCAGCCTCTCCAGCGAGCTCAGATGCCCCCTCTGCCCGAAGGCTTCCC GCAGCTGCCGCCTGAGATTCTACAGGCCCAGTTCGCCAAGGGAGTGCCAC CGGCGCAGTTGTTGCACCAGCCACCCATGGTTCCAGAGCCGTATCCGCTT CCTCCAAATCTGCCGATACATATGCTGCAAAATGCCAACTTGCCGCCTCA GCACATGGTGCCTCCCCAACGTCAGGCGATGCCACCGGCGGCTCAGCGAC CCCAGCAGCAGCAACCGCCCCTACCTCAAGCTCCCCGTGGTAACAACGCG CAATTGCCAGTGATTACCAACTCTCAGCAGTTGATGCACCTGACGGAAGA GCAGCGCGTAGCGTACCTGATGGAAGATGCCAAGCGTGCGAAGCGCAATC ACAAGATCTTTCTTCTATCCAGGGGCAACGGGCTGATGACCCCGCAAGAC AAGAACTTCATCACCCGAATCCAGCTTCAGCAACTAGTCGCTGCTGCTGG CAACGTGGCGGACTCTGATGCAGAAGCGGTCTTGGCAGAGGACTTCTACT ATCAGGTTTACAGCCAGATCCGGGGTGCGCCGCGGCAACACCCACACCAA CCTCTCGGTCACTTTGCGCAGACATACCTCCTCCAGACAGGCAACAGACT CGGGGGCCATGGCTCTCGCCGGCAGTTTCAGAGCGCCGACAATCACATGC AGAGAATGCAGCAGCAGGTCCAGCGTGCGGTGGAGGCCGCTAAGCAGAAG CCTAAGAACAAGCAGCTTATCATTGAGGGCAGCTTGGGTAAGATTTCTTT CAGCAACGCCAAGACGCCAAAGCCCATGCTCAACATCAAGCGTCCGGAGA GCTCGGAAGGCGCTAAGACGGTGAAAAAGCCTCACACCGATTTGAGTGTT AGCGACCGCAAATCAGTCCTGACCAACCTTGAGAGCGTTTACAGCACGCT TATGGATATGGAGGACATGGAGCGCACGATGCCTCCCCCGCCAGATGAGA ATGATCCCGAGGCCATTCAGAAGCACATGGAATGGAGACAGAAGATCCGC TCGCTCAACCAGAAGTTGTGGCGCGACCTTAAGGTCATGGAACCCATTGT CCCCAACACCAACACTCCCCATCCGTTCATTGCCTTCCTTGCTTATCCCA AGGGCAAGAAGGCCATCCCCCGCATTTTCCGCCACATTGATCAGGAGCAG CGTGTTACTATTCTTACTATGATCGTTGTGCACTTGGATTCTCTGGACGT CGTCCGGCGCGCCCAGCCTGTTCCGGGTGAGACCCAGCCCTCTCTGGCCG TTCGGGAAGCCATTGAGCTTTTCTCTCAGGCCGTCATGCCCAGTCTTCTG GGGTACGTCAACGAGGCGCCATTCAATATTATCATTGGCTTGCTGGGACT TGTCATTGCGCAGACGCATGTCCAGATGATCGCGAGGACCCGCATTGGAC TTGGAATCTTGACCATGCTTCTCAGTCGGGCCGAAATCGTGAAGGAGGCT GGACAGGCTACGGAGCGGGACTGGCAGCAGTGGGTTGAGAAGTTCAATGT GCTGTTTGACACCCTTGAACCTACGTTTGCAGATATCTTCCCCAGCTCGA TCAATGCTGGCGACGACATGTATGTGTGGCAGTTCTTGGCTGCAGTTGGT ATCGGAGCTAGCCCCGAACAACAGCAACGCCTTGTTATTGCGGTTAAATG TCCTTCTTCGGTTTCAATACCACCCTGCCTAGGGATCGAGCTCCTGCGGG CGAACAGAGGGGTATCTTCGACACCCCTGATCCGTTCGCCGAAGTCGCCC GCGCCAGACTGGCAGCAAACTTCCAAAGCGGCGAGGATGACGACGTGGAC CGGGTGATGGAGACGGTGACTTACAGCAAGACGCTTCCTGCCGATATGGC CAGTGCGCGTCTTGGCAACGTCAACCTTTTCATGCGGGCTATTGGCCTCG ATGTCGAACTTCTAGGTTAACATCGACTTTGAGGATACGTACGACGGCCT GGGAGACCAACTGGACGATGACCAGGATGCGTTCAACGATGACACGTTTG GTGGCGGCTTCGACACCGGCCCGGTTGGAAAGGATTTCGACTTCTTCGGA AAGACTGCTCAGGTCGCCGATGTAATCGGGGAGGAGCAGATCCGCTACAG CCTTCAGAAACCCGGTGCGCCTGCGACCGCGCCTTCGCAGCCCAGCGCCG ATACTGCTCTGCCGGACACTACGGCCCAGAAGCCCAAACGGTCTGGCTAT GAGAAGTACAACGACCCGGGTTACATCCCCGACCTTCAGGCCAAGTCTAG CGTCTGGGGCATGTCGAAGAAGCCGGAACAGCAGCTCCAGCAACAGCAGC TCCAGCAACAGCTACAACAGCTACAACAGCTACAGCAGCCCACGCCTCAG ATGGTAGCGCAAGCGAAGAAGATGCTGAGTCTCGAGGAGGTGGAAGCGCA GCTGCGGAGACAGGGTCCGACTTCGCTGCCCGCCCAAATCCCGCTGTCCC TTCCGCAGTCGATGCCAGAGCCCACTCAGCCTCTCCAGCGAGCTCAGATG CCCCCTCTGCCCGAAGGCTTCCCGCAGCTGCCGCCTGAGATTCTACAGGC CCAGTTCGCCAAGGGAGTGCCACCGGCGCAGTTGTTGCACCAGCCACCCA TGGTTCCAGAGCCGTATCCGCTTCCTCCAAATCTGCCGATACATATGCTG CAAAATGCCAACTTGCCGCCTCAGCACATGGTGCCTCCCCAACGTCAGGC GATGCCACCGGCGGCTCAGCGACCCCAGCAGCAGCAACCGCCCCTACCTC AAGCTCCCCGTGGTAACAACGCGCAATTGCCAGTGATTACCAACTCTCAG CAGTTGATGCACCTGACGGAAGAGCAGCGCGTAGCGTACCTGATGGAAGA TGCCAAGCGTGCGAAGCGCAATCACAAGATCTTTCTTCTATCCAGGGGCA ACGGGCTGATGACCCCGCAAGACAAGAACTTCATCACCCGAATCCAGCTT CAGCAACTAGTCGCTGCTGCTGGCAACGTGGCGGACTCTGATGCAGAAGC GGTCTTGGCAGAGGACTTCTACTATCAGGTTTACAGCCAGATCCGGGGTG CGCCGCGGCAACACCCACACCAACCTCTCGGTCACTTTGCGCAGACATAC CTCCTCCAGACAGGCAACAGACTCGGGGGCCATGGCTCTCGCCGGCAGTT TCAGAGCGCCGACAATCACATGCAGAGAATGCAGCAGCAGGTCCAGCGTG CGGTGGAGGCCGCTAAGCAGAAGCCTAAGAACAAGCAGCTTATCATTGAG GGCAGCTTGGGTAAGATTTCTTTCAGCAACGCCAAGACGCCAAAGCCCAT GCTCAACATCAAGCGTCCGGAGAGCTCGGAAGGCGCTAAGACGGTGAAAA AGCCTCACACCGATTTGAGTGTTAGCGACCGCAAATCAGTCCTGACCAAC CTTGAGAGCGTTTACAGCACGCTTATGGATATGGAGGACATGGAGCGCAC GATGCCTCCCCCGCCAGATGAGAATGATCCCGAGGCCATTCAGAAGCACA TGGAATGGAGACAGAAGATCCGCTCGCTCAACCAGAAGTTGTGGCGCGAC CTTAAGGTCATGGAACCCATTGTCCCCAACACCAACACTCCCCATCCGTT CATTGCCTTCCTTGCTTATCCCAAGGGCAAGAAGGCCATCCCCCGCATTT TCCGCCACATTGATCAGGAGCAGCGTGTTACTATTCTTACTATGATCGTT GTGCACTTGGATTCTCTGGACGTCGTCCGGCGCGCCCAGCCTGTTCCGGG TGAGACCCAGCCCTCTCTGGCCGTTCGGGAAGCCATTGAGCTTTTCTCTC AGGCCGTCATGCCCAGTCTTCTGGGGTACGTCAACGAGGCGCCATTCAAT ATTATCATTGGCTTGCTGGGACTTGTCATTGCGCAGACGCATGTCCAGAT GATCGCGAGGACCCGCATTGGACTTGGAATCTTGACCATGCTTCTCAGTC GGGCCGAAATCGTGAAGGAGGCTGGACAGGCTACGGAGCGGGACTGGCAG CAGTGGGTTGAGAAGTTCAATGTGCTGTTTGACACCCTTGAACCTACGTT TGCAGATATCTTCCCCAGCTCGATCAATGCTGGCGACGACATGTATGTGT GGCAGTTCTTGGCTGCAGTTGGTATCGGAGCTAGCCCCGAACAACAGCAA CGCCTTGTTATTGCGGTTAAATGTCCTTCTTCGGTTTCAATACCACCCTG CCTAGGGATCGAGCTCCTGCGGGCGAACAGAGGGGTATCTTCGACACCCC TGATCCGTTCGCCGAAGTCGCCCGCGCCAGACTGGCAGCAAACTTCCAAA GCGGCGAGGATGACGACGT back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type |
KJC3_001122-T1.utr3p1 | KJC3_001122-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type |
KJC3_001122-T1.utr5p1 | KJC3_001122-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
Property Name | Value |
Note | BUSCO:EOG09260S3L |
DBxref | InterPro:IPR019167 |
DBxref | PFAM:PF09770 |
Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
ch1 | supercontig | ch1:2855741..2858520 - |
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