|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at ch1:2887107..2888616+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_001133-T1 ID=KJC3_001133-T1|Name=KJC3_001133-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1510bp|location=Sequence derived from alignment at ch1:2887107..2888616+ (Aspergillus niger KJC3)
TGTAGATGTAGATCTCTTAGATGGTGACGTTGAGGTGCCGAGCCGGCCGA
TGGTGTTTTGGCCGCGAATGACTGCATGACCCCGCCGCCCTCCGCATCGG
CTTCTTCCCTCGCTTTTGGTCAGCCCACCTTGTGCTTCTCTGACTGACTC
CAGCAATTGAGCATCGCACGACCAGTCGATGCATCCTTACCGTTTGCGTC
TTCCCTTTCATCAACCCCTCCGTAAGCTACAATCAGTCGCCTGCTGTCGT
TACTACAGCTCCGGACGTACCTCTACGATGAATCCCGGATCACTGCCCGA
TGGGCCCAGCCACGACGCAAAACATCCCAAGAAGCTGATCTGTACGTCGT
CGCAAGACATCTCAAGGAGAACCTATCACTCACCACATATCTAGTCGCTC
CAGGAGACATCCAGACTACGCCCGAGCCAAAAATCACCCCCACCGAGACG
CCCGATCCCTCTGCTACAGCCACCGGAGTCACAACAGCACCAGCACCCAT
CTCTCGTCTCGCCGCAGAAGCCCTTCGCTCGAACGCATCGACCCCCGACT
CGGTGACTGAAAATGAGATCGTTTCCCACCCTGCCCGCGCTCACCAGTTC
GTGAGCAACCCACCCCTCACTATCTCCCAGATGCACCCGACCAACCCTCT
CCACCAATTCCACAACTGGTTCCGCGATCCCCGTCTCCTTCCGTCGTCCG
CACCTGAAACCTGCACCCTCGCTACAGCCAGCATGCCCTCCGGTCGGGTG
AGCGCCCGTGTCGTATACCTCAAGGAACTGGATGAGCGAGGCTGGGTAGT
TTACAGTAACTGGGGCAGTCGAGAAGGCAAGGGCGGACAAGTATTTGGCA
ATCACGCAGACGGCGAGGACACGCTCAGCGCCATGCCCGAACCCGGCCAG
GACGAGTCTCTTCAAGCCGGACTACAAGAGGGCAACAAATGGGCGGCATT
GACATTCTGCTGGTCGAATCTGGAACGTCAGGTGCGCATCGAGGGTCTCG
TCGAGCCGCTCAGTCGCGATGAGAGTGAAATGTACTGGCGTACTCGGGAA
CGAGGGAGCCAGATCGGAGCTTGGGCGAGCTGGCAGAGCAAGGTGCTGTG
GTCTATGGAGCCGGAGCTGCTTCTGGATCGTCGGCGCAAGAGCTTGGATC
CGACTTTGTGTCCGCAGATGCAGGTCCCCGGGGATGTGGACGCGACGGAC
ATCGACGATGGGCGGGCGCTGTTGGAGAAGCGGGTCAAGGAGATGGAGGA
ACGGTTTGCGGGGGTCGAGCAGATCCCTCTGCCTCCGTTTTGGGGAGGAG
TGCGCTTGGTCCCTGAGTCGGTGGAGTTCTGGCAGGGTCGGCGCAGTCGG
TTGCATGACCGATTCCGGTATGTGAGGGTGCATAAGGAGGACGGAGAGGA
AGGGGGGTATATATGGCGGATTCAGAGGCTGTCGCCATGAGCGACACAGT
TTAATAATTACTATTATAAAGGCTATACATGAATAATATTGTTACGAGCT
TAGCCACTAG back to topCoding sequence (CDS) from alignment at ch1:2887107..2888616+ >KJC3_001133-T1 ID=KJC3_001133-T1|Name=KJC3_001133-T1|organism=Aspergillus niger KJC3|type=CDS|length=2418bp|location=Sequence derived from alignment at ch1:2887107..2888616+ (Aspergillus niger KJC3)
ATGCATCCTTACCGTTTGCGTCTTCCCTTTCATCAACCCCTCCGTAAGCT
ACAATCAGTCGCCTGCTGTCGTTACTACAGCTCCGGACGTACCTCTACGA
TGAATCCCGGATCACTGCCCGATGGGCCCAGCCACGACGCAAAACATCCC
AAGAAGCTGATCTTCGCTCCAGGAGACATCCAGACTACGCCCGAGCCAAA
AATCACCCCCACCGAGACGCCCGATCCCTCTGCTACAGCCACCGGAGTCA
CAACAGCACCAGCACCCATCTCTCGTCTCGCCGCAGAAGCCCTTCGCTCG
AACGCATCGACCCCCGACTCGGTGACTGAAAATGAGATCGTTTCCCACCC
TGCCCGCGCTCACCAGTTCGTGAGCAACCCACCCCTCACTATCTCCCAGA
TGCACCCGACCAACCCTCTCCACCAATTCCACAACTGGTTCCGCGATCCC
CGTCTCCTTCCGTCGTCCGCACCTGAAACCTGCACCCTCGCTACAGCCAG
CATGCCCTCCGGTCGGGTGAGCGCCCGTGTCGTATACCTCAAGGAACTGG
ATGAGCGAGGCTGGGTAGTTTACAGTAACTGGGGCAGTCGAGAAGGCAAG
GGCGGACAAGTATTTGGCAATCACGCAGACGGCGAGGACACGCTCAGCGC
CATGCCCGAACCCGGCCAGGACGAGTCTCTTCAAGCCGGACTACAAGAGG
GCAACAAATGGGCGGCATTGACATTCTGCTGGTCGAATCTGGAACGTCAG
GTGCGCATCGAGGGTCTCGTCGAGCCGCTCAGTCGCGATGAGAGTGAAAT
GTACTGGCGTACTCGGGAACGAGGGAGCCAGATCGGAGCTTGGGCGAGCT
GGCAGAGCAAGGTGCTGTGGTCTATGGAGCCGGAGCTGCTTCTGGATCGT
CGGCGCAAGAGCTTGGATCCGACTTTGTGTCCGCAGATGCAGGTCCCCGG
GGATGTGGACGCGACGGACATCGACGATGGGCGGGCGCTGTTGGAGAAGC
GGGTCAAGGAGATGGAGGAACGGTTTGCGGGGGTCGAGCAGATCCCTCTG
CCTCCGTTTTGGGGAGGAGTGCGCTTGGTCCCTGAGTCGGTGGAGTTCTG
GCAGGGTCGGCGCAGTCGGTTGCATGACCGATTCCGGTATGTGAGGGTGC
ATAAGGAGGACGGAGAGGAAGGGGGGTATATATGGCGGATTCAGAGGCTG
TCGCCATGAATGCATCCTTACCGTTTGCGTCTTCCCTTTCATCAACCCCT
CCGTAAGCTACAATCAGTCGCCTGCTGTCGTTACTACAGCTCCGGACGTA
CCTCTACGATGAATCCCGGATCACTGCCCGATGGGCCCAGCCACGACGCA
AAACATCCCAAGAAGCTGATCTTCGCTCCAGGAGACATCCAGACTACGCC
CGAGCCAAAAATCACCCCCACCGAGACGCCCGATCCCTCTGCTACAGCCA
CCGGAGTCACAACAGCACCAGCACCCATCTCTCGTCTCGCCGCAGAAGCC
CTTCGCTCGAACGCATCGACCCCCGACTCGGTGACTGAAAATGAGATCGT
TTCCCACCCTGCCCGCGCTCACCAGTTCGTGAGCAACCCACCCCTCACTA
TCTCCCAGATGCACCCGACCAACCCTCTCCACCAATTCCACAACTGGTTC
CGCGATCCCCGTCTCCTTCCGTCGTCCGCACCTGAAACCTGCACCCTCGC
TACAGCCAGCATGCCCTCCGGTCGGGTGAGCGCCCGTGTCGTATACCTCA
AGGAACTGGATGAGCGAGGCTGGGTAGTTTACAGTAACTGGGGCAGTCGA
GAAGGCAAGGGCGGACAAGTATTTGGCAATCACGCAGACGGCGAGGACAC
GCTCAGCGCCATGCCCGAACCCGGCCAGGACGAGTCTCTTCAAGCCGGAC
TACAAGAGGGCAACAAATGGGCGGCATTGACATTCTGCTGGTCGAATCTG
GAACGTCAGGTGCGCATCGAGGGTCTCGTCGAGCCGCTCAGTCGCGATGA
GAGTGAAATGTACTGGCGTACTCGGGAACGAGGGAGCCAGATCGGAGCTT
GGGCGAGCTGGCAGAGCAAGGTGCTGTGGTCTATGGAGCCGGAGCTGCTT
CTGGATCGTCGGCGCAAGAGCTTGGATCCGACTTTGTGTCCGCAGATGCA
GGTCCCCGGGGATGTGGACGCGACGGACATCGACGATGGGCGGGCGCTGT
TGGAGAAGCGGGTCAAGGAGATGGAGGAACGGTTTGCGGGGGTCGAGCAG
ATCCCTCTGCCTCCGTTTTGGGGAGGAGTGCGCTTGGTCCCTGAGTCGGT
GGAGTTCTGGCAGGGTCGGCGCAGTCGGTTGCATGACCGATTCCGGTATG
TGAGGGTGCATAAGGAGGACGGAGAGGAAGGGGGGTATATATGGCGGATT
CAGAGGCTGTCGCCATGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0016638 | oxidoreductase activity, acting on the CH-NH2 group of donors |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0055114 | oxidation-reduction process |
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_001133-T1.utr5p1 | KJC3_001133-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_001133-T1.utr3p1 | KJC3_001133-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG09264ZXA |
| DBxref | InterPro:IPR019740 |
| DBxref | InterPro:IPR019576 |
| DBxref | PFAM:PF10590 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch1 | supercontig | ch1:2887107..2888616 + |
|
