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KJC3_001139-T1, KJC3_001139-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_001139-T1
Unique NameKJC3_001139-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch1:2898250..2898780-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_001139-T1 ID=KJC3_001139-T1|Name=KJC3_001139-T1|organism=Aspergillus niger KJC3|type=mRNA|length=531bp|location=Sequence derived from alignment at ch1:2898250..2898780- (Aspergillus niger KJC3)
ATGTGTGGTTCAGACATCTTTCTAGCGATTCTCGCGGTTTTCTTTCCCCC
AGTCTCGGGTGAGTATTGATCGCACATTGAATTGCATTTGCGAGAGGACG
CATGCTAACCGACTGGCTCAGTGTGGATCAAAGTAGGCATTTGCACGGCC
GATTCCATCATCAACCTTGCTCTCTGCTGCCTTGGCTACGTGCCCGGGCT
TTTACACGCCTGGTACATTATACTCAAGTACCCCGAACCAGATTACGATG
ACCCTAGCTACGAGCCTCTCCCTGGCGATGCGGAAAACGGTCGCGTAACA
TATTACTATGTTTCCCACCAGCCGATCCAGCATCCCTCCCAGAGGGGCTA
TGGTACTTTGCCGCCACAACAGCCCCAAGCAGCAAACGCCCCGCCACAGA
ACCGGCAGCCTACTCCGAATCACTCTCAGGAACAAGCCCAAGCTGGCAGC
AGCAGCCAGGAACATCATGATAGTCGCCCACCTCCTACCTATGCTGAGGC
CGTGAAGGGAGACCATAAAGTGCAGGACTGA
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Coding sequence (CDS) from alignment at ch1:2898250..2898780-

>KJC3_001139-T1 ID=KJC3_001139-T1|Name=KJC3_001139-T1|organism=Aspergillus niger KJC3|type=CDS|length=936bp|location=Sequence derived from alignment at ch1:2898250..2898780- (Aspergillus niger KJC3)
TGTGGATCAAAGTAGGCATTTGCACGGCCGATTCCATCATCAACCTTGCT
CTCTGCTGCCTTGGCTACGTGCCCGGGCTTTTACACGCCTGGTACATTAT
ACTCAAGTACCCCGAACCAGATTACGATGACCCTAGCTACGAGCCTCTCC
CTGGCGATGCGGAAAACGGTCGCGTAACATATTACTATGTTTCCCACCAG
CCGATCCAGCATCCCTCCCAGAGGGGCTATGGTACTTTGCCGCCACAACA
GCCCCAAGCAGCAAACGCCCCGCCACAGAACCGGCAGCCTACTCCGAATC
ACTCTCAGGAACAAGCCCAAGCTGGCAGCAGCAGCCAGGAACATCATGAT
AGTCGCCCACCTCCTACCTATGCTGAGGCCGTGAAGGGAGACCATAAAGT
GCAGGACTGAATGTGTGGTTCAGACATCTTTCTAGCGATTCTCGCGGTTT
TCTTTCCCCCAGTCTCGGTGTGGATCAAAGTAGGCATTTGCACGGCCGAT
TCCATCATCAACCTTGCTCTCTGCTGCCTTGGCTACGTGCCCGGGCTTTT
ACACGCCTGGTACATTATACTCAAGTACCCCGAACCAGATTACGATGACC
CTAGCTACGAGCCTCTCCCTGGCGATGCGGAAAACGGTCGCGTAACATAT
TACTATGTTTCCCACCAGCCGATCCAGCATCCCTCCCAGAGGGGCTATGG
TACTTTGCCGCCACAACAGCCCCAAGCAGCAAACGCCCCGCCACAGAACC
GGCAGCCTACTCCGAATCACTCTCAGGAACAAGCCCAAGCTGGCAGCAGC
AGCCAGGAACATCATGATAGTCGCCCACCTCCTACCTATGCTGAGGCCGT
GAAGGGAGACCATAAAGTGCAGGACTGAATGTGTGGTTCAGACATCTTTC
TAGCGATTCTCGCGGTTTTCTTTCCCCCAGTCTCGG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_001139KJC3_001139Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001139-T1KJC3_001139-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001139-T1.cdsKJC3_001139-T1.cdsAspergillus niger KJC3CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001139-T1.exon2KJC3_001139-T1.exon2Aspergillus niger KJC3exon
KJC3_001139-T1.exon1KJC3_001139-T1.exon1Aspergillus niger KJC3exon


Properties
Property NameValue
DBxrefInterPro:IPR000612
DBxrefPFAM:PF01679
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch1supercontigch1:2898250..2898780 -
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