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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch1:2901018..2904640+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_001140-T1 ID=KJC3_001140-T1|Name=KJC3_001140-T1|organism=Aspergillus niger KJC3|type=mRNA|length=3623bp|location=Sequence derived from alignment at ch1:2901018..2904640+ (Aspergillus niger KJC3)
CTCTGGCACCAACAGCCTCAAACCGGACGTGTGCCACGTCAGTCGATCAC
CGCCAGAGATAGATAATCCCTAAGAACTCCTATGCATCACAAAATTCCTC
GCGATGATCAAGGCAATAAAGTTCCCGGTTCCTGCATTGATTCTTCCTTT
TCTTCTCTTCTTCCGCTTGCTTGTTCCTGAGTTCCTTGCAAATCCAGCGA
CACCCCCTGCAGGATCTCATAAGTTGGTCTGACTTTACGCCAGGGAGTGG
AAAAGATTCTGACCATTCGCATCCTTGCTGCAAGCGCAAAGCATCCTAGA
GTTAGCCAGTGTCTACAGCGAAAAAGTGAAACGCAGAAGGTTAGTGTTTA
CTTCTGGAAAGTTTGATGGGTGTGATAATGAACCGAGTCGGGATCGGCTC
TTGTACCTCAGTTCCGGGTGCTGGTGGAGCTCCGGTTCAAGATTTCATTT
GATAACACTGAGTCTCGCAACAAGTGGACTAACTCGATCTGTAGGCGCAA
CTGAATCTTCATGCGGAGGGACTCAATCGCAGCGCATTGCAGTGGAGCAG
TTTAATTGGAAAGACGCCGGCTACTCTTGCGAACCGCCCGCCCGTCCCCC
TTTTGAGTCAGTCTTCTCCAGTCGCGGCCCTTCTGGTGCTTCTGCCTCTT
TACCTTTTTTTGTTTCTTGCGCTTCTTCCGTTATTCAAGATTGTTCCGTG
AAGGAGCCGACTTCCATCGAGTCCAATCGCGCCGTTCTGCCGGTGCTTTG
CTTTCCTGGGTCTCTTCCTTTCGGGGGGCCTCGAACCCAAGCGGCAATCA
CATCCAGCCCAGACTGGGAAAGCACGGCCTTCCTCCAGGTTCCTTGTCTA
GCGCCTGCCTTTTCTGCCGTGGATCGACGCCTCTTTTCATTTCTCCTCCC
GTGACTCTTCGATTATCTTGGGCTTTCCTCCTTGTCCTTTGCCTTCGCCG
TTGAGGTGCTTCCCGACATTACTCGCTATAAACCCAACCAAGTCACTCGT
TCATCCTCAGGTTCTAATCGCATCGGCAGAGTCCCTTGCGCTCTACCCGA
ATATTCTTTCTCGCTTTCTCTAAAAATCTATTTGTCCCACTGATTTTGGA
CGCGTCGACAATTGAACCCACTCGGGTTAAAGACCATCGTTGCGCACATC
CGATCGTTCATTCAACACCCAAAAAAGTAATCGCGAAAGAAGGGAATGAG
CATGGAAACGACTAAATCACTCTCCTGCTGAATGTCCATATCCGAATTGT
GATCTGCTCGTCATTGTTCTGCCCTACGATATCAATTTTCGCATTCAGAA
GCACCTGGCAGCCGCCAGTGTCGATCCAACCATGTCCGGCACTTGCATCT
CATTGTCGGGCTCGACACAATGCCCTGCTTTTGACAGTTCCTCTGTCTCG
ACGAATTCCAGTCTCTACACCGATTTGTATGTCCCAGCGTCCAAGATGGA
ACGTCCATTGCGCTAACTGCCTCCGAGTCCATTCATGCAATATGTGTCGA
ACCTCACGCAGTTCGACAATGAGTTGAGCAGCTATGTCATGCAGGGATAT
GTGAGGGAAAAGTAAGTATTCCATTTCGCAATGGCAGGGGAAATGACTGA
CCAAAATACCTTTTACTAGGTATGAGGAATACTTGGGCTGTCAGGGGGTA
AACTTGACTGATACAGACGATTATTACGCCCGCTATACGACAAGTGTATT
ATGTAGCAGCCTGGTACAAAGTTCAAAGAGTGATTGCAACCTATCCGATG
AAGAATCAAGACCGCTTTGCGCTGATACCTGCGTTTGTCAACCCCCTTCT
AATCATTTGTTGTTTGGACATCCCCACTAACTTCTATTAGGCATCAATGG
CGATAAGTGAAGAGGCGATAGTCACGGACACCAATCTCTGCTCCGGAAAG
GCAAGCGACTACATGTCTCAAATTCGGTCAGACTTTACGATTTGCGCCCT
ACCAGCCGATTCGCTTACGGTAACTTGCATCACGGGAGCTGAAAATGAAC
CGAAAAATTGCGGATTCCGTTCGAATGTCTTGGGACTGTGTTCGTATTGC
GCCTCGGGCTCGTCAAATTCCACCGATTCGTGCTGTACAGACTCGAATGC
TGCTACTCGGTGTTCGAATGTCACAGTTCCGTCTTCGACACTCCCGCCGA
TATTCACCTCCACAGCTGCATCCAACTCAACAGCAGGCTCCAATGACTTA
TCGGGAGGTCAGATAGCCGGGGTTGTTATAGGTTCTGTAGCCGGGTTTGC
TCTTCTCGCCGCATTAGCCGTGCTAGCATTGATCTATTGGCGGCGCAGGC
GCCGGGCGGAGAATGATAGCTCACTGAATCAGCCCAATCCCCAGAGGAAG
GGGTCACCGTCAATGCAGCAGGACCGAAGCCCGCACGAGTTTGCTGCCAT
ACCCGGCGGAAGAGTTGCCAGGATGTCTGCATTGCGCGAAGTTCCCAGCT
CATCTCCAGCCCGATCTCGGTACTCTGCTTTGTTCGGTGGCGCAAAGTAC
AGCGACACCTCAGATTCCGATCACGGTGCCAGCCCTGGGGCAATGTCGAA
AAAGATTCCCCCCACAACCGGAAAACGGCATGGCTCGCTTTCCAGTAACT
CAGCCTTAGCTGGTGCGGGCACTGATTCCTCCCCTCGGTCAGGAACTGGT
GGCCAGTATTCGTCACCAGATGGACTGACCAGCGGCCAGTCGGAGCAGCT
GTCCGCCTTCCAAGACTACTACTCGCAGGATGACATTCATCCGGGCGACA
AGGTTGCCGTACTCTGGGCATACCAGCCTCGGGCAGGTGATGAATTTGCG
CTGGATCGCGGTGAAATGCTAAAAGTGATTGGCATCTGGGACGATGGGTG
GGCTACTGGTATTCGAATTCCCGAAACAGCAGAGGATCACGATGCTCGAC
ACCGCGAGCAGCGAGATAGTGGCGTATCGAATGGCTCACGGCGGGCAGCT
ACATCTCCCGCTCCCGTCGGGGATATCAAGGCATTCCCTCTGGTCTGTGT
ATGCCTCCCACAACATTGGAGGAAGATCATCGATGGTGGACAAGCTGAAG
ACGACTGAGGGTTATTGGCAGCAGCTACTTGCCCATCCGTCTATCCAACA
CATGGTACCATTAACGCCAAATTTATGCCCCAGTGATGATCTTTTTCTTC
GATATTGTTTCCTTTCGTGCGATTGATGAGTATAACCATCAGCCTCTCAC
CTAGTTTGTCTTTTGCAACCAGCCCTGCCTCAAATTCTTGTGACATGGAC
GATATCCTGAGACGATTTCATACCCTTGTCATTTGCGCTTATTCTCTGTT
GAATTCTGTGAGCTTCTATATACCCCATTCTACAGCAACAGGTTGTTGCT
ACTTCATGTATGATTTTATTTTTTTTCTTTGCTTCCCTTCGTTTTTACAT
ACATCTTATCTCTTCTATGCCGCTGATCCCACCATGTGCACGCGTCTCGT
GGACGATATGATGTCGATTACTGGTGCGGTAGCGGGGTTCTTTTATGTCA
CTACCTATTCGCCATCGTGCAGGGTGAACGATGGTAAGCTTTACGGTCTG
GAAGTATAGATTATTTTGATACCGTTTTTCCATAGATGTTCTGAATGATT
GAAGATGACTTTGTAATGCAGCT back to topCoding sequence (CDS) from alignment at ch1:2901018..2904640+ >KJC3_001140-T1 ID=KJC3_001140-T1|Name=KJC3_001140-T1|organism=Aspergillus niger KJC3|type=CDS|length=6240bp|location=Sequence derived from alignment at ch1:2901018..2904640+ (Aspergillus niger KJC3)
ATGTCCGGCACTTGCATCTCATTGTCGGGCTCGACACAATGCCCTGCTTT
TGACAGTTCCTCTGTCTCGACGAATTCCAGTCTCTACACCGATTTTCCAT
TCATGCAATATGTGTCGAACCTCACGCAGTTCGACAATGAGTTGAGCAGC
TATGTCATGCAGGGATATGTGAGGGAAAAGTATGAGGAATACTTGGGCTG
TCAGGGGGTAAACTTGACTGATACAGACGATTATTACGCCCGCTATACGA
CAAGTGTATTATGTAGCAGCCTGGTACAAAGTTCAAAGAGTGATTGCAAC
CTATCCGATGAAGAATCAAGACCGCTTTGCGCTGATACCTGCGCATCAAT
GGCGATAAGTGAAGAGGCGATAGTCACGGACACCAATCTCTGCTCCGGAA
AGGCAAGCGACTACATGTCTCAAATTCGGTCAGACTTTACGATTTGCGCC
CTACCAGCCGATTCGCTTACGGTAACTTGCATCACGGGAGCTGAAAATGA
ACCGAAAAATTGCGGATTCCGTTCGAATGTCTTGGGACTGTGTTCGTATT
GCGCCTCGGGCTCGTCAAATTCCACCGATTCGTGCTGTACAGACTCGAAT
GCTGCTACTCGGTGTTCGAATGTCACAGTTCCGTCTTCGACACTCCCGCC
GATATTCACCTCCACAGCTGCATCCAACTCAACAGCAGGCTCCAATGACT
TATCGGGAGGTCAGATAGCCGGGGTTGTTATAGGTTCTGTAGCCGGGTTT
GCTCTTCTCGCCGCATTAGCCGTGCTAGCATTGATCTATTGGCGGCGCAG
GCGCCGGGCGGAGAATGATAGCTCACTGAATCAGCCCAATCCCCAGAGGA
AGGGGTCACCGTCAATGCAGCAGGACCGAAGCCCGCACGAGTTTGCTGCC
ATACCCGGCGGAAGAGTTGCCAGGATGTCTGCATTGCGCGAAGTTCCCAG
CTCATCTCCAGCCCGATCTCGGTACTCTGCTTTGTTCGGTGGCGCAAAGT
ACAGCGACACCTCAGATTCCGATCACGGTGCCAGCCCTGGGGCAATGTCG
AAAAAGATTCCCCCCACAACCGGAAAACGGCATGGCTCGCTTTCCAGTAA
CTCAGCCTTAGCTGGTGCGGGCACTGATTCCTCCCCTCGGTCAGGAACTG
GTGGCCAGTATTCGTCACCAGATGGACTGACCAGCGGCCAGTCGGAGCAG
CTGTCCGCCTTCCAAGACTACTACTCGCAGGATGACATTCATCCGGGCGA
CAAGGTTGCCGTACTCTGGGCATACCAGCCTCGGGCAGGTGATGAATTTG
CGCTGGATCGCGGTGAAATGCTAAAAGTGATTGGCATCTGGGACGATGGG
TGGGCTACTGGTATTCGAATTCCCGAAACAGCAGAGGATCACGATGCTCG
ACACCGCGAGCAGCGAGATAGTGGCGTATCGAATGGCTCACGGCGGGCAG
CTACATCTCCCGCTCCCGTCGGGGATATCAAGGCATTCCCTCTGGTCTGT
GTATGCCTCCCACAACATTGGAGGAAGATCATCGATGGTGGACAAGCTGA
AGACGACTGAATGTCCGGCACTTGCATCTCATTGTCGGGCTCGACACAAT
GCCCTGCTTTTGACAGTTCCTCTGTCTCGACGAATTCCAGTCTCTACACC
GATTTTCCATTCATGCAATATGTGTCGAACCTCACGCAGTTCGACAATGA
GTTGAGCAGCTATGTCATGCAGGGATATGTGAGGGAAAAGTATGAGGAAT
ACTTGGGCTGTCAGGGGGTAAACTTGACTGATACAGACGATTATTACGCC
CGCTATACGACAAGTGTATTATGTAGCAGCCTGGTACAAAGTTCAAAGAG
TGATTGCAACCTATCCGATGAAGAATCAAGACCGCTTTGCGCTGATACCT
GCGCATCAATGGCGATAAGTGAAGAGGCGATAGTCACGGACACCAATCTC
TGCTCCGGAAAGGCAAGCGACTACATGTCTCAAATTCGGTCAGACTTTAC
GATTTGCGCCCTACCAGCCGATTCGCTTACGGTAACTTGCATCACGGGAG
CTGAAAATGAACCGAAAAATTGCGGATTCCGTTCGAATGTCTTGGGACTG
TGTTCGTATTGCGCCTCGGGCTCGTCAAATTCCACCGATTCGTGCTGTAC
AGACTCGAATGCTGCTACTCGGTGTTCGAATGTCACAGTTCCGTCTTCGA
CACTCCCGCCGATATTCACCTCCACAGCTGCATCCAACTCAACAGCAGGC
TCCAATGACTTATCGGGAGGTCAGATAGCCGGGGTTGTTATAGGTTCTGT
AGCCGGGTTTGCTCTTCTCGCCGCATTAGCCGTGCTAGCATTGATCTATT
GGCGGCGCAGGCGCCGGGCGGAGAATGATAGCTCACTGAATCAGCCCAAT
CCCCAGAGGAAGGGGTCACCGTCAATGCAGCAGGACCGAAGCCCGCACGA
GTTTGCTGCCATACCCGGCGGAAGAGTTGCCAGGATGTCTGCATTGCGCG
AAGTTCCCAGCTCATCTCCAGCCCGATCTCGGTACTCTGCTTTGTTCGGT
GGCGCAAAGTACAGCGACACCTCAGATTCCGATCACGGTGCCAGCCCTGG
GGCAATGTCGAAAAAGATTCCCCCCACAACCGGAAAACGGCATGGCTCGC
TTTCCAGTAACTCAGCCTTAGCTGGTGCGGGCACTGATTCCTCCCCTCGG
TCAGGAACTGGTGGCCAGTATTCGTCACCAGATGGACTGACCAGCGGCCA
GTCGGAGCAGCTGTCCGCCTTCCAAGACTACTACTCGCAGGATGACATTC
ATCCGGGCGACAAGGTTGCCGTACTCTGGGCATACCAGCCTCGGGCAGGT
GATGAATTTGCGCTGGATCGCGGTGAAATGCTAAAAGTGATTGGCATCTG
GGACGATGGGTGGGCTACTGGTATTCGAATTCCCGAAACAGCAGAGGATC
ACGATGCTCGACACCGCGAGCAGCGAGATAGTGGCGTATCGAATGGCTCA
CGGCGGGCAGCTACATCTCCCGCTCCCGTCGGGGATATCAAGGCATTCCC
TCTGGTCTGTGTATGCCTCCCACAACATTGGAGGAAGATCATCGATGGTG
GACAAGCTGAAGACGACTGAATGTCCGGCACTTGCATCTCATTGTCGGGC
TCGACACAATGCCCTGCTTTTGACAGTTCCTCTGTCTCGACGAATTCCAG
TCTCTACACCGATTTTCCATTCATGCAATATGTGTCGAACCTCACGCAGT
TCGACAATGAGTTGAGCAGCTATGTCATGCAGGGATATGTGAGGGAAAAG
TATGAGGAATACTTGGGCTGTCAGGGGGTAAACTTGACTGATACAGACGA
TTATTACGCCCGCTATACGACAAGTGTATTATGTAGCAGCCTGGTACAAA
GTTCAAAGAGTGATTGCAACCTATCCGATGAAGAATCAAGACCGCTTTGC
GCTGATACCTGCGCATCAATGGCGATAAGTGAAGAGGCGATAGTCACGGA
CACCAATCTCTGCTCCGGAAAGGCAAGCGACTACATGTCTCAAATTCGGT
CAGACTTTACGATTTGCGCCCTACCAGCCGATTCGCTTACGGTAACTTGC
ATCACGGGAGCTGAAAATGAACCGAAAAATTGCGGATTCCGTTCGAATGT
CTTGGGACTGTGTTCGTATTGCGCCTCGGGCTCGTCAAATTCCACCGATT
CGTGCTGTACAGACTCGAATGCTGCTACTCGGTGTTCGAATGTCACAGTT
CCGTCTTCGACACTCCCGCCGATATTCACCTCCACAGCTGCATCCAACTC
AACAGCAGGCTCCAATGACTTATCGGGAGGTCAGATAGCCGGGGTTGTTA
TAGGTTCTGTAGCCGGGTTTGCTCTTCTCGCCGCATTAGCCGTGCTAGCA
TTGATCTATTGGCGGCGCAGGCGCCGGGCGGAGAATGATAGCTCACTGAA
TCAGCCCAATCCCCAGAGGAAGGGGTCACCGTCAATGCAGCAGGACCGAA
GCCCGCACGAGTTTGCTGCCATACCCGGCGGAAGAGTTGCCAGGATGTCT
GCATTGCGCGAAGTTCCCAGCTCATCTCCAGCCCGATCTCGGTACTCTGC
TTTGTTCGGTGGCGCAAAGTACAGCGACACCTCAGATTCCGATCACGGTG
CCAGCCCTGGGGCAATGTCGAAAAAGATTCCCCCCACAACCGGAAAACGG
CATGGCTCGCTTTCCAGTAACTCAGCCTTAGCTGGTGCGGGCACTGATTC
CTCCCCTCGGTCAGGAACTGGTGGCCAGTATTCGTCACCAGATGGACTGA
CCAGCGGCCAGTCGGAGCAGCTGTCCGCCTTCCAAGACTACTACTCGCAG
GATGACATTCATCCGGGCGACAAGGTTGCCGTACTCTGGGCATACCAGCC
TCGGGCAGGTGATGAATTTGCGCTGGATCGCGGTGAAATGCTAAAAGTGA
TTGGCATCTGGGACGATGGGTGGGCTACTGGTATTCGAATTCCCGAAACA
GCAGAGGATCACGATGCTCGACACCGCGAGCAGCGAGATAGTGGCGTATC
GAATGGCTCACGGCGGGCAGCTACATCTCCCGCTCCCGTCGGGGATATCA
AGGCATTCCCTCTGGTCTGTGTATGCCTCCCACAACATTGGAGGAAGATC
ATCGATGGTGGACAAGCTGAAGACGACTGAATGTCCGGCACTTGCATCTC
ATTGTCGGGCTCGACACAATGCCCTGCTTTTGACAGTTCCTCTGTCTCGA
CGAATTCCAGTCTCTACACCGATTTTCCATTCATGCAATATGTGTCGAAC
CTCACGCAGTTCGACAATGAGTTGAGCAGCTATGTCATGCAGGGATATGT
GAGGGAAAAGTATGAGGAATACTTGGGCTGTCAGGGGGTAAACTTGACTG
ATACAGACGATTATTACGCCCGCTATACGACAAGTGTATTATGTAGCAGC
CTGGTACAAAGTTCAAAGAGTGATTGCAACCTATCCGATGAAGAATCAAG
ACCGCTTTGCGCTGATACCTGCGCATCAATGGCGATAAGTGAAGAGGCGA
TAGTCACGGACACCAATCTCTGCTCCGGAAAGGCAAGCGACTACATGTCT
CAAATTCGGTCAGACTTTACGATTTGCGCCCTACCAGCCGATTCGCTTAC
GGTAACTTGCATCACGGGAGCTGAAAATGAACCGAAAAATTGCGGATTCC
GTTCGAATGTCTTGGGACTGTGTTCGTATTGCGCCTCGGGCTCGTCAAAT
TCCACCGATTCGTGCTGTACAGACTCGAATGCTGCTACTCGGTGTTCGAA
TGTCACAGTTCCGTCTTCGACACTCCCGCCGATATTCACCTCCACAGCTG
CATCCAACTCAACAGCAGGCTCCAATGACTTATCGGGAGGTCAGATAGCC
GGGGTTGTTATAGGTTCTGTAGCCGGGTTTGCTCTTCTCGCCGCATTAGC
CGTGCTAGCATTGATCTATTGGCGGCGCAGGCGCCGGGCGGAGAATGATA
GCTCACTGAATCAGCCCAATCCCCAGAGGAAGGGGTCACCGTCAATGCAG
CAGGACCGAAGCCCGCACGAGTTTGCTGCCATACCCGGCGGAAGAGTTGC
CAGGATGTCTGCATTGCGCGAAGTTCCCAGCTCATCTCCAGCCCGATCTC
GGTACTCTGCTTTGTTCGGTGGCGCAAAGTACAGCGACACCTCAGATTCC
GATCACGGTGCCAGCCCTGGGGCAATGTCGAAAAAGATTCCCCCCACAAC
CGGAAAACGGCATGGCTCGCTTTCCAGTAACTCAGCCTTAGCTGGTGCGG
GCACTGATTCCTCCCCTCGGTCAGGAACTGGTGGCCAGTATTCGTCACCA
GATGGACTGACCAGCGGCCAGTCGGAGCAGCTGTCCGCCTTCCAAGACTA
CTACTCGCAGGATGACATTCATCCGGGCGACAAGGTTGCCGTACTCTGGG
CATACCAGCCTCGGGCAGGTGATGAATTTGCGCTGGATCGCGGTGAAATG
CTAAAAGTGATTGGCATCTGGGACGATGGGTGGGCTACTGGTATTCGAAT
TCCCGAAACAGCAGAGGATCACGATGCTCGACACCGCGAGCAGCGAGATA
GTGGCGTATCGAATGGCTCACGGCGGGCAGCTACATCTCCCGCTCCCGTC
GGGGATATCAAGGCATTCCCTCTGGTCTGTGTATGCCTCCCACAACATTG
GAGGAAGATCATCGATGGTGGACAAGCTGAAGACGACTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005515 | protein binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_001140-T1.utr3p1 | KJC3_001140-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036028 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch1 | supercontig | ch1:2901018..2904640 + |
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