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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch1:2901018..2904640+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_001140-T2 ID=KJC3_001140-T2|Name=KJC3_001140-T2|organism=Aspergillus niger KJC3|type=mRNA|length=3623bp|location=Sequence derived from alignment at ch1:2901018..2904640+ (Aspergillus niger KJC3)
CTCTGGCACCAACAGCCTCAAACCGGACGTGTGCCACGTCAGTCGATCAC
CGCCAGAGATAGATAATCCCTAAGAACTCCTATGCATCACAAAATTCCTC
GCGATGATCAAGGCAATAAAGTTCCCGGTTCCTGCATTGATTCTTCCTTT
TCTTCTCTTCTTCCGCTTGCTTGTTCCTGAGTTCCTTGCAAATCCAGCGA
CACCCCCTGCAGGATCTCATAAGTTGGTCTGACTTTACGCCAGGGAGTGG
AAAAGATTCTGACCATTCGCATCCTTGCTGCAAGCGCAAAGCATCCTAGA
GTTAGCCAGTGTCTACAGCGAAAAAGTGAAACGCAGAAGGTTAGTGTTTA
CTTCTGGAAAGTTTGATGGGTGTGATAATGAACCGAGTCGGGATCGGCTC
TTGTACCTCAGTTCCGGGTGCTGGTGGAGCTCCGGTTCAAGATTTCATTT
GATAACACTGAGTCTCGCAACAAGTGGACTAACTCGATCTGTAGGCGCAA
CTGAATCTTCATGCGGAGGGACTCAATCGCAGCGCATTGCAGTGGAGCAG
TTTAATTGGAAAGACGCCGGCTACTCTTGCGAACCGCCCGCCCGTCCCCC
TTTTGAGTCAGTCTTCTCCAGTCGCGGCCCTTCTGGTGCTTCTGCCTCTT
TACCTTTTTTTGTTTCTTGCGCTTCTTCCGTTATTCAAGATTGTTCCGTG
AAGGAGCCGACTTCCATCGAGTCCAATCGCGCCGTTCTGCCGGTGCTTTG
CTTTCCTGGGTCTCTTCCTTTCGGGGGGCCTCGAACCCAAGCGGCAATCA
CATCCAGCCCAGACTGGGAAAGCACGGCCTTCCTCCAGGTTCCTTGTCTA
GCGCCTGCCTTTTCTGCCGTGGATCGACGCCTCTTTTCATTTCTCCTCCC
GTGACTCTTCGATTATCTTGGGCTTTCCTCCTTGTCCTTTGCCTTCGCCG
TTGAGGTGCTTCCCGACATTACTCGCTATAAACCCAACCAAGTCACTCGT
TCATCCTCAGGTTCTAATCGCATCGGCAGAGTCCCTTGCGCTCTACCCGA
ATATTCTTTCTCGCTTTCTCTAAAAATCTATTTGTCCCACTGATTTTGGA
CGCGTCGACAATTGAACCCACTCGGGTTAAAGACCATCGTTGCGCACATC
CGATCGTTCATTCAACACCCAAAAAAGTAATCGCGAAAGAAGGGAATGAG
CATGGAAACGACTAAATCACTCTCCTGCTGAATGTCCATATCCGAATTGT
GATCTGCTCGTCATTGTTCTGCCCTACGATATCAATTTTCGCATTCAGAA
GCACCTGGCAGCCGCCAGTGTCGATCCAACCATGTCCGGCACTTGCATCT
CATTGTCGGGCTCGACACAATGCCCTGCTTTTGACAGTTCCTCTGTCTCG
ACGAATTCCAGTCTCTACACCGATTTGTATGTCCCAGCGTCCAAGATGGA
ACGTCCATTGCGCTAACTGCCTCCGAGTCCATTCATGCAATATGTGTCGA
ACCTCACGCAGTTCGACAATGAGTTGAGCAGCTATGTCATGCAGGGATAT
GTGAGGGAAAAGTAAGTATTCCATTTCGCAATGGCAGGGGAAATGACTGA
CCAAAATACCTTTTACTAGGTATGAGGAATACTTGGGCTGTCAGGGGGTA
AACTTGACTGATACAGACGATTATTACGCCCGCTATACGACAAGTGTATT
ATGTAGCAGCCTGGTACAAAGTTCAAAGAGTGATTGCAACCTATCCGATG
AAGAATCAAGACCGCTTTGCGCTGATACCTGCGTTTGTCAACCCCCTTCT
AATCATTTGTTGTTTGGACATCCCCACTAACTTCTATTAGGCATCAATGG
CGATAAGTGAAGAGGCGATAGTCACGGACACCAATCTCTGCTCCGGAAAG
GCAAGCGACTACATGTCTCAAATTCGGTCAGACTTTACGATTTGCGCCCT
ACCAGCCGATTCGCTTACGGTAACTTGCATCACGGGAGCTGAAAATGAAC
CGAAAAATTGCGGATTCCGTTCGAATGTCTTGGGACTGTGTTCGTATTGC
GCCTCGGGCTCGTCAAATTCCACCGATTCGTGCTGTACAGACTCGAATGC
TGCTACTCGGTGTTCGAATGTCACAGTTCCGTCTTCGACACTCCCGCCGA
TATTCACCTCCACAGCTGCATCCAACTCAACAGCAGGCTCCAATGACTTA
TCGGGAGGTCAGATAGCCGGGGTTGTTATAGGTTCTGTAGCCGGGTTTGC
TCTTCTCGCCGCATTAGCCGTGCTAGCATTGATCTATTGGCGGCGCAGGC
GCCGGGCGGAGAATGATAGCTCACTGAATCAGCCCAATCCCCAGAGGAAG
GGGTCACCGTCAATGCAGCAGGACCGAAGCCCGCACGAGTTTGCTGCCAT
ACCCGGCGGAAGAGTTGCCAGGATGTCTGCATTGCGCGAAGTTCCCAGCT
CATCTCCAGCCCGATCTCGGTACTCTGCTTTGTTCGGTGGCGCAAAGTAC
AGCGACACCTCAGATTCCGATCACGGTGCCAGCCCTGGGGCAATGTCGAA
AAAGATTCCCCCCACAACCGGAAAACGGCATGGCTCGCTTTCCAGTAACT
CAGCCTTAGCTGGTGCGGGCACTGATTCCTCCCCTCGGTCAGGAACTGGT
GGCCAGTATTCGTCACCAGATGGACTGACCAGCGGCCAGTCGGAGCAGCT
GTCCGCCTTCCAAGACTACTACTCGCAGGATGACATTCATCCGGGCGACA
AGGTTGCCGTACTCTGGGCATACCAGCCTCGGGCAGGTGATGAATTTGCG
CTGGATCGCGGTGAAATGCTAAAAGTGATTGGCATCTGGGACGATGGGTG
GGCTACTGGTATTCGAATTCCCGAAACAGCAGAGGATCACGATGCTCGAC
ACCGCGAGCAGCGAGATAGTGGCGTATCGAATGGCTCACGGCGGGCAGCT
ACATCTCCCGCTCCCGTCGGGGATATCAAGGCATTCCCTCTGGTCTGTGT
ATGCCTCCCACAACATTGGAGGAAGATCATCGATGGTGGACAAGCTGAAG
ACGACTGAGGGTTATTGGCAGCAGCTACTTGCCCATCCGTCTATCCAACA
CATGGTACCATTAACGCCAAATTTATGCCCCAGTGATGATCTTTTTCTTC
GATATTGTTTCCTTTCGTGCGATTGATGAGTATAACCATCAGCCTCTCAC
CTAGTTTGTCTTTTGCAACCAGCCCTGCCTCAAATTCTTGTGACATGGAC
GATATCCTGAGACGATTTCATACCCTTGTCATTTGCGCTTATTCTCTGTT
GAATTCTGTGAGCTTCTATATACCCCATTCTACAGCAACAGGTTGTTGCT
ACTTCATGTATGATTTTATTTTTTTTCTTTGCTTCCCTTCGTTTTTACAT
ACATCTTATCTCTTCTATGCCGCTGATCCCACCATGTGCACGCGTCTCGT
GGACGATATGATGTCGATTACTGGTGCGGTAGCGGGGTTCTTTTATGTCA
CTACCTATTCGCCATCGTGCAGGGTGAACGATGGTAAGCTTTACGGTCTG
GAAGTATAGATTATTTTGATACCGTTTTTCCATAGATGTTCTGAATGATT
GAAGATGACTTTGTAATGCAGCT back to topCoding sequence (CDS) from alignment at ch1:2901018..2904640+ >KJC3_001140-T2 ID=KJC3_001140-T2|Name=KJC3_001140-T2|organism=Aspergillus niger KJC3|type=CDS|length=4374bp|location=Sequence derived from alignment at ch1:2901018..2904640+ (Aspergillus niger KJC3)
ATGCAATATGTGTCGAACCTCACGCAGTTCGACAATGAGTTGAGCAGCTA
TGTCATGCAGGGATATGTGAGGGAAAAGTATGAGGAATACTTGGGCTGTC
AGGGGGTAAACTTGACTGATACAGACGATTATTACGCCCGCTATACGACA
AGTGTATTATGTAGCAGCCTGGTACAAAGTTCAAAGAGTGATTGCAACCT
ATCCGATGAAGAATCAAGACCGCTTTGCGCTGATACCTGCGCATCAATGG
CGATAAGTGAAGAGGCGATAGTCACGGACACCAATCTCTGCTCCGGAAAG
GCAAGCGACTACATGTCTCAAATTCGGTCAGACTTTACGATTTGCGCCCT
ACCAGCCGATTCGCTTACGGTAACTTGCATCACGGGAGCTGAAAATGAAC
CGAAAAATTGCGGATTCCGTTCGAATGTCTTGGGACTGTGTTCGTATTGC
GCCTCGGGCTCGTCAAATTCCACCGATTCGTGCTGTACAGACTCGAATGC
TGCTACTCGGTGTTCGAATGTCACAGTTCCGTCTTCGACACTCCCGCCGA
TATTCACCTCCACAGCTGCATCCAACTCAACAGCAGGCTCCAATGACTTA
TCGGGAGGTCAGATAGCCGGGGTTGTTATAGGTTCTGTAGCCGGGTTTGC
TCTTCTCGCCGCATTAGCCGTGCTAGCATTGATCTATTGGCGGCGCAGGC
GCCGGGCGGAGAATGATAGCTCACTGAATCAGCCCAATCCCCAGAGGAAG
GGGTCACCGTCAATGCAGCAGGACCGAAGCCCGCACGAGTTTGCTGCCAT
ACCCGGCGGAAGAGTTGCCAGGATGTCTGCATTGCGCGAAGTTCCCAGCT
CATCTCCAGCCCGATCTCGGTACTCTGCTTTGTTCGGTGGCGCAAAGTAC
AGCGACACCTCAGATTCCGATCACGGTGCCAGCCCTGGGGCAATGTCGAA
AAAGATTCCCCCCACAACCGGAAAACGGCATGGCTCGCTTTCCAGTAACT
CAGCCTTAGCTGGTGCGGGCACTGATTCCTCCCCTCGGTCAGGAACTGGT
GGCCAGTATTCGTCACCAGATGGACTGACCAGCGGCCAGTCGGAGCAGCT
GTCCGCCTTCCAAGACTACTACTCGCAGGATGACATTCATCCGGGCGACA
AGGTTGCCGTACTCTGGGCATACCAGCCTCGGGCAGGTGATGAATTTGCG
CTGGATCGCGGTGAAATGCTAAAAGTGATTGGCATCTGGGACGATGGGTG
GGCTACTGGTATTCGAATTCCCGAAACAGCAGAGGATCACGATGCTCGAC
ACCGCGAGCAGCGAGATAGTGGCGTATCGAATGGCTCACGGCGGGCAGCT
ACATCTCCCGCTCCCGTCGGGGATATCAAGGCATTCCCTCTGGTCTGTGT
ATGCCTCCCACAACATTGGAGGAAGATCATCGATGGTGGACAAGCTGAAG
ACGACTGAATGCAATATGTGTCGAACCTCACGCAGTTCGACAATGAGTTG
AGCAGCTATGTCATGCAGGGATATGTGAGGGAAAAGTATGAGGAATACTT
GGGCTGTCAGGGGGTAAACTTGACTGATACAGACGATTATTACGCCCGCT
ATACGACAAGTGTATTATGTAGCAGCCTGGTACAAAGTTCAAAGAGTGAT
TGCAACCTATCCGATGAAGAATCAAGACCGCTTTGCGCTGATACCTGCGC
ATCAATGGCGATAAGTGAAGAGGCGATAGTCACGGACACCAATCTCTGCT
CCGGAAAGGCAAGCGACTACATGTCTCAAATTCGGTCAGACTTTACGATT
TGCGCCCTACCAGCCGATTCGCTTACGGTAACTTGCATCACGGGAGCTGA
AAATGAACCGAAAAATTGCGGATTCCGTTCGAATGTCTTGGGACTGTGTT
CGTATTGCGCCTCGGGCTCGTCAAATTCCACCGATTCGTGCTGTACAGAC
TCGAATGCTGCTACTCGGTGTTCGAATGTCACAGTTCCGTCTTCGACACT
CCCGCCGATATTCACCTCCACAGCTGCATCCAACTCAACAGCAGGCTCCA
ATGACTTATCGGGAGGTCAGATAGCCGGGGTTGTTATAGGTTCTGTAGCC
GGGTTTGCTCTTCTCGCCGCATTAGCCGTGCTAGCATTGATCTATTGGCG
GCGCAGGCGCCGGGCGGAGAATGATAGCTCACTGAATCAGCCCAATCCCC
AGAGGAAGGGGTCACCGTCAATGCAGCAGGACCGAAGCCCGCACGAGTTT
GCTGCCATACCCGGCGGAAGAGTTGCCAGGATGTCTGCATTGCGCGAAGT
TCCCAGCTCATCTCCAGCCCGATCTCGGTACTCTGCTTTGTTCGGTGGCG
CAAAGTACAGCGACACCTCAGATTCCGATCACGGTGCCAGCCCTGGGGCA
ATGTCGAAAAAGATTCCCCCCACAACCGGAAAACGGCATGGCTCGCTTTC
CAGTAACTCAGCCTTAGCTGGTGCGGGCACTGATTCCTCCCCTCGGTCAG
GAACTGGTGGCCAGTATTCGTCACCAGATGGACTGACCAGCGGCCAGTCG
GAGCAGCTGTCCGCCTTCCAAGACTACTACTCGCAGGATGACATTCATCC
GGGCGACAAGGTTGCCGTACTCTGGGCATACCAGCCTCGGGCAGGTGATG
AATTTGCGCTGGATCGCGGTGAAATGCTAAAAGTGATTGGCATCTGGGAC
GATGGGTGGGCTACTGGTATTCGAATTCCCGAAACAGCAGAGGATCACGA
TGCTCGACACCGCGAGCAGCGAGATAGTGGCGTATCGAATGGCTCACGGC
GGGCAGCTACATCTCCCGCTCCCGTCGGGGATATCAAGGCATTCCCTCTG
GTCTGTGTATGCCTCCCACAACATTGGAGGAAGATCATCGATGGTGGACA
AGCTGAAGACGACTGAATGCAATATGTGTCGAACCTCACGCAGTTCGACA
ATGAGTTGAGCAGCTATGTCATGCAGGGATATGTGAGGGAAAAGTATGAG
GAATACTTGGGCTGTCAGGGGGTAAACTTGACTGATACAGACGATTATTA
CGCCCGCTATACGACAAGTGTATTATGTAGCAGCCTGGTACAAAGTTCAA
AGAGTGATTGCAACCTATCCGATGAAGAATCAAGACCGCTTTGCGCTGAT
ACCTGCGCATCAATGGCGATAAGTGAAGAGGCGATAGTCACGGACACCAA
TCTCTGCTCCGGAAAGGCAAGCGACTACATGTCTCAAATTCGGTCAGACT
TTACGATTTGCGCCCTACCAGCCGATTCGCTTACGGTAACTTGCATCACG
GGAGCTGAAAATGAACCGAAAAATTGCGGATTCCGTTCGAATGTCTTGGG
ACTGTGTTCGTATTGCGCCTCGGGCTCGTCAAATTCCACCGATTCGTGCT
GTACAGACTCGAATGCTGCTACTCGGTGTTCGAATGTCACAGTTCCGTCT
TCGACACTCCCGCCGATATTCACCTCCACAGCTGCATCCAACTCAACAGC
AGGCTCCAATGACTTATCGGGAGGTCAGATAGCCGGGGTTGTTATAGGTT
CTGTAGCCGGGTTTGCTCTTCTCGCCGCATTAGCCGTGCTAGCATTGATC
TATTGGCGGCGCAGGCGCCGGGCGGAGAATGATAGCTCACTGAATCAGCC
CAATCCCCAGAGGAAGGGGTCACCGTCAATGCAGCAGGACCGAAGCCCGC
ACGAGTTTGCTGCCATACCCGGCGGAAGAGTTGCCAGGATGTCTGCATTG
CGCGAAGTTCCCAGCTCATCTCCAGCCCGATCTCGGTACTCTGCTTTGTT
CGGTGGCGCAAAGTACAGCGACACCTCAGATTCCGATCACGGTGCCAGCC
CTGGGGCAATGTCGAAAAAGATTCCCCCCACAACCGGAAAACGGCATGGC
TCGCTTTCCAGTAACTCAGCCTTAGCTGGTGCGGGCACTGATTCCTCCCC
TCGGTCAGGAACTGGTGGCCAGTATTCGTCACCAGATGGACTGACCAGCG
GCCAGTCGGAGCAGCTGTCCGCCTTCCAAGACTACTACTCGCAGGATGAC
ATTCATCCGGGCGACAAGGTTGCCGTACTCTGGGCATACCAGCCTCGGGC
AGGTGATGAATTTGCGCTGGATCGCGGTGAAATGCTAAAAGTGATTGGCA
TCTGGGACGATGGGTGGGCTACTGGTATTCGAATTCCCGAAACAGCAGAG
GATCACGATGCTCGACACCGCGAGCAGCGAGATAGTGGCGTATCGAATGG
CTCACGGCGGGCAGCTACATCTCCCGCTCCCGTCGGGGATATCAAGGCAT
TCCCTCTGGTCTGTGTATGCCTCCCACAACATTGGAGGAAGATCATCGAT
GGTGGACAAGCTGAAGACGACTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005515 | protein binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_001140-T2.utr3p1 | KJC3_001140-T2.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036028 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch1 | supercontig | ch1:2901018..2904640 + |
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