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KJC3_001141-T1, KJC3_001141-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_001141-T1
Unique NameKJC3_001141-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch1:2904994..2906557+

Legend: five_prime_UTRexonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_001141-T1 ID=KJC3_001141-T1|Name=KJC3_001141-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1564bp|location=Sequence derived from alignment at ch1:2904994..2906557+ (Aspergillus niger KJC3)
GACAAAGGCAGACAGGCGTCTACAAAATGCTAGCTAGCTAGCTAGCTGGT
CGACATAAAATTTACACCTAAATAGATCTCTCCCAAGATAGCAAAGCCCC
CACACTTTGAGCGACCGCCGAGGTATGGATCGTAGATGCCTGGGTCATCC
ATCTATGCCACATGTACTCCGTAGGCTCTGGCCCAAACACATCGTCATCG
CCAGTGAATAATCGCCTGACATGCATCAGGGTGCAGGCAGGTGCATTACC
AACGAGTTGGGCCTATGGGTTGGCCACACCTAGTCAACAGTACATACTTT
ACCTCATTTACCTCACAGTAAAAGTCCAGGCTTATTTCGTCATCCTCAGG
ATTCAGGGGGAAAAGATGGGTGGGAAGGGGAAATAAGCGGCCGGTGGTGC
GACGGGTGGGTCACGTGCTAGGCCCCCCCCCACCGCCGCCGCCCGCCGCA
GCAGCAGCAACCCAGCAAAGCACAACTAAATGCCCCTCTATCTCCAGCTC
GGTTCCCATCCATCCTCCCCCGTTATATTCCTCTCTTACATCCCCTCATC
CTGTCTCCGTTGCTCTTACGCAGACTACCCCGTGAAAGCCATTTGACCAG
TCTAACGGTGCTTGGTGCGTATACCACATTTCCCTTTTCGTTCGCCGTTC
TTTTTTTCGCCAACCATCTTGCGATTATGACAAAGGACAAATAAGGGGGA
ATCCGGCCAACTAACATCGCGTGCATGCGCAGGTTATCCGTCTGTCAACT
TGTCTTACCTCTTTACCATCTCTCCCCTTTATCTACACAAATAACCATGT
CTGTGAGTAATACTCGCCCGTGTGTTCCCCTCTCAGGGCTAACCGTTTAT
TTCCCTGCCTTGTAGCTCGCGTCTGGGTATGTTCCTGACTGCTTCTGATC
TCCGCATGTGTCTTCGACCATCCCTACAATATCGGGAACTCGACGATGAC
AACCGAATAAGGCTGACTAAGTTACGGAGGACAGTGTTTCCATCACCGAT
GAGTGCATCACCGCATTCAACGAGTTCCGCATGAGCGGCAACAGCAGGGG
AAGCAAGACGAAGTTCATCATCTTCAAGATCGCCGACAACAAGAAGGAGG
TTGTCATCGACGAGGTTTCCCAGGACGAGGACTACGAGGTCTTCCGCGAA
AAGCTCGCGGCCGCTAAGGATGCTAAGGGCAACCCCGCTCCCCGTTATGC
AGTTTACGACGTCGAGTACGACCTGGGCGGTGGTGAAGGCAAGAGGTATG
ATGATGATGACGATAGCCGAACGTTTACTTTAGCATATCTGCTCACTTTC
TTCTCACCACAGGAGCAAGATCATCTTCATTTCCTGGGTTCCCAGCGACA
CCGCTACCCTCGTACGTTCCGCACCGTCTCAGTTGTTCAAGCCCCCAAAT
CATTGCTGACACCGATGAAACAGTGGTCCATGATCTACGCCAGCACTCGC
GAGAACCTGAAGAACGCCCTCAACATCCACACCTCCATCCACGCCGACGA
CAAGTCCGACATCGAGTGGAAGACCGTCCTGGCCGAGGCCAGCGGTGGTA
AGGCTGGCAAATAA
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Coding sequence (CDS) from alignment at ch1:2904994..2906557+

>KJC3_001141-T1 ID=KJC3_001141-T1|Name=KJC3_001141-T1|organism=Aspergillus niger KJC3|type=CDS|length=1215bp|location=Sequence derived from alignment at ch1:2904994..2906557+ (Aspergillus niger KJC3)
ATGAGCGGCAACAGCAGGGGAAGCAAGACGAAGTTCATCATCTTCAAGAT
CGCCGACAACAAGAAGGAGGTTGTCATCGACGAGGTTTCCCAGGACGAGG
ACTACGAGGTCTTCCGCGAAAAGCTCGCGGCCGCTAAGGATGCTAAGGGC
AACCCCGCTCCCCGTTATGCAGTTTACGACGTCGAGTACGACCTGGGCGG
TGGTGAAGGCAAGAGGAGCAAGATCATCTTCATTTCCTGGGTTCCCAGCG
ACACCGCTACCCTCTGGTCCATGATCTACGCCAGCACTCGCGAGAACCTG
AAGAACGCCCTCAACATCCACACCTCCATCCACGCCGACGACAAGTCCGA
CATCGAGTGGAAGACCGTCCTGGCCGAGGCCAGCGGTGGTAAGGCTGGCA
AATAAATGAGCGGCAACAGCAGGGGAAGCAAGACGAAGTTCATCATCTTC
AAGATCGCCGACAACAAGAAGGAGGTTGTCATCGACGAGGTTTCCCAGGA
CGAGGACTACGAGGTCTTCCGCGAAAAGCTCGCGGCCGCTAAGGATGCTA
AGGGCAACCCCGCTCCCCGTTATGCAGTTTACGACGTCGAGTACGACCTG
GGCGGTGGTGAAGGCAAGAGGAGCAAGATCATCTTCATTTCCTGGGTTCC
CAGCGACACCGCTACCCTCTGGTCCATGATCTACGCCAGCACTCGCGAGA
ACCTGAAGAACGCCCTCAACATCCACACCTCCATCCACGCCGACGACAAG
TCCGACATCGAGTGGAAGACCGTCCTGGCCGAGGCCAGCGGTGGTAAGGC
TGGCAAATAAATGAGCGGCAACAGCAGGGGAAGCAAGACGAAGTTCATCA
TCTTCAAGATCGCCGACAACAAGAAGGAGGTTGTCATCGACGAGGTTTCC
CAGGACGAGGACTACGAGGTCTTCCGCGAAAAGCTCGCGGCCGCTAAGGA
TGCTAAGGGCAACCCCGCTCCCCGTTATGCAGTTTACGACGTCGAGTACG
ACCTGGGCGGTGGTGAAGGCAAGAGGAGCAAGATCATCTTCATTTCCTGG
GTTCCCAGCGACACCGCTACCCTCTGGTCCATGATCTACGCCAGCACTCG
CGAGAACCTGAAGAACGCCCTCAACATCCACACCTCCATCCACGCCGACG
ACAAGTCCGACATCGAGTGGAAGACCGTCCTGGCCGAGGCCAGCGGTGGT
AAGGCTGGCAAATAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0015629actin cytoskeleton
Vocabulary: Biological Process
TermDefinition
GO:0030042actin filament depolymerization
Vocabulary: Molecular Function
TermDefinition
GO:0003779actin binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_001141KJC3_001141Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001141-T1KJC3_001141-T1-proteinAspergillus niger KJC3polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001141-T1.utr5p1KJC3_001141-T1.utr5p1Aspergillus niger KJC3five_prime_UTR
KJC3_001141-T1.utr5p2KJC3_001141-T1.utr5p2Aspergillus niger KJC3five_prime_UTR
KJC3_001141-T1.utr5p3KJC3_001141-T1.utr5p3Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001141-T1.exon1KJC3_001141-T1.exon1Aspergillus niger KJC3exon
KJC3_001141-T1.exon2KJC3_001141-T1.exon2Aspergillus niger KJC3exon
KJC3_001141-T1.exon3KJC3_001141-T1.exon3Aspergillus niger KJC3exon
KJC3_001141-T1.exon4KJC3_001141-T1.exon4Aspergillus niger KJC3exon
KJC3_001141-T1.exon5KJC3_001141-T1.exon5Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001141-T1.cdsKJC3_001141-T1.cdsAspergillus niger KJC3CDS


Properties
Property NameValue
DBxrefInterPro:IPR017904
DBxrefInterPro:IPR029006
DBxrefInterPro:IPR002108
DBxrefPFAM:PF00241
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch1supercontigch1:2904994..2906557 +
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