You are here

Home

KJC3_001153-T1, KJC3_001153-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_001153-T1
Unique NameKJC3_001153-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch1:2944327..2945339+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_001153-T1 ID=KJC3_001153-T1|Name=KJC3_001153-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1013bp|location=Sequence derived from alignment at ch1:2944327..2945339+ (Aspergillus niger KJC3)
ATGACCCAACCCAAAACAATCCTCATAACCGGCGCCGCCGGAGGCATTGG
CCTCGCCACATCCCGGCATTTCAACACCCTCCACCCCACCAGTACCATCA
TCCTCACTGATCTGCCCACTCACCAAGAGGCCACTGAGTCCTTGATTCAG
AGTACATTCCCGCACCCGGAAAAGGCAGTCTTTCTCCCCGCTAATATTAC
GGACTGGGGGCGAATGACACATCTATTCAGGACGATTGCACAGAAATACG
GCGGGGTGGATGTGGTGGTTGCAAATGCGGGAATGATGGAGTCTACGCCT
GTTCTAGATTTGGAGGATATTGATGAGGAGACAGGGGAGTTGAGGGAGAG
TTTGGAGGCAAGGAGGGTGGTGGATGTTAATCTGATGGGGACTTTGAATA
GTATGAATGCCTTTCTTTTCTTCTTTTGTGCTCTGGGGTGTGAGGTGCTA
ATGGTGTGAAGCTCTGCGATTGGCGATGTATCACATGAAAGAGAAGGAGA
AGAAGAACGGTTCAATTGTGCTGGTGGCTTCTACGTCGGGTTATTTTGGA
GGCACGGGTGTCACAGCTTATGTGGCTTCCAAGCATGGTGTAGTGGGATT
GCTTCGGGCGTCGCAAGTGACGGCGCAGAAGTATGGCATCCGTGTTAATG
CCGTTGCACCATTCATGACCCCAACTAGAATGACGGCTGGTTTGTCTCAA
AGCTGGCAGGATGCTGGGCTCGAGGCGAACACTCCTGAACGGGTGGCGGA
GGTTATTGAGCAGGTCGGGATGGATACGGCCCGGAGGGGCTCTTGTATGC
TGGTGAGTGCACCGAATAGCAGGAGTGATTGTGATGTACAGTCGCACTAA
GGGGTTTATGTGCTAGGTTGCTGGAAGATTTCTCAGGGAGATGGAGTCGA
CGAGGATGGCATTGCTCCCGTCATGGCTAGGTCAAGATGTTGCGGATTTC
ATGGCGAAAGCAATGAAGTTCATTGCAGACATCGGAGGCTATGTGCTTCC
TGCTCGACTATAG
back to top

Coding sequence (CDS) from alignment at ch1:2944327..2945339+

>KJC3_001153-T1 ID=KJC3_001153-T1|Name=KJC3_001153-T1|organism=Aspergillus niger KJC3|type=CDS|length=2664bp|location=Sequence derived from alignment at ch1:2944327..2945339+ (Aspergillus niger KJC3)
ATGACCCAACCCAAAACAATCCTCATAACCGGCGCCGCCGGAGGCATTGG
CCTCGCCACATCCCGGCATTTCAACACCCTCCACCCCACCAGTACCATCA
TCCTCACTGATCTGCCCACTCACCAAGAGGCCACTGAGTCCTTGATTCAG
AGTACATTCCCGCACCCGGAAAAGGCAGTCTTTCTCCCCGCTAATATTAC
GGACTGGGGGCGAATGACACATCTATTCAGGACGATTGCACAGAAATACG
GCGGGGTGGATGTGGTGGTTGCAAATGCGGGAATGATGGAGTCTACGCCT
GTTCTAGATTTGGAGGATATTGATGAGGAGACAGGGGAGTTGAGGGAGAG
TTTGGAGGCAAGGAGGGTGGTGGATGTTAATCTGATGGGGACTTTGAATA
CTCTGCGATTGGCGATGTATCACATGAAAGAGAAGGAGAAGAAGAACGGT
TCAATTGTGCTGGTGGCTTCTACGTCGGGTTATTTTGGAGGCACGGGTGT
CACAGCTTATGTGGCTTCCAAGCATGGTGTAGTGGGATTGCTTCGGGCGT
CGCAAGTGACGGCGCAGAAGTATGGCATCCGTGTTAATGCCGTTGCACCA
TTCATGACCCCAACTAGAATGACGGCTGGTTTGTCTCAAAGCTGGCAGGA
TGCTGGGCTCGAGGCGAACACTCCTGAACGGGTGGCGGAGGTTATTGAGC
AGGTCGGGATGGATACGGCCCGGAGGGGCTCTTGTATGCTGGTTGCTGGA
AGATTTCTCAGGGAGATGGAGTCGACGAGGATGGCATTGCTCCCGTCATG
GCTAGGTCAAGATGTTGCGGATTTCATGGCGAAAGCAATGAAGTTCATTG
CAGACATCGGAGGCTATGTGCTTCCTGCTCGACTATAGATGACCCAACCC
AAAACAATCCTCATAACCGGCGCCGCCGGAGGCATTGGCCTCGCCACATC
CCGGCATTTCAACACCCTCCACCCCACCAGTACCATCATCCTCACTGATC
TGCCCACTCACCAAGAGGCCACTGAGTCCTTGATTCAGAGTACATTCCCG
CACCCGGAAAAGGCAGTCTTTCTCCCCGCTAATATTACGGACTGGGGGCG
AATGACACATCTATTCAGGACGATTGCACAGAAATACGGCGGGGTGGATG
TGGTGGTTGCAAATGCGGGAATGATGGAGTCTACGCCTGTTCTAGATTTG
GAGGATATTGATGAGGAGACAGGGGAGTTGAGGGAGAGTTTGGAGGCAAG
GAGGGTGGTGGATGTTAATCTGATGGGGACTTTGAATACTCTGCGATTGG
CGATGTATCACATGAAAGAGAAGGAGAAGAAGAACGGTTCAATTGTGCTG
GTGGCTTCTACGTCGGGTTATTTTGGAGGCACGGGTGTCACAGCTTATGT
GGCTTCCAAGCATGGTGTAGTGGGATTGCTTCGGGCGTCGCAAGTGACGG
CGCAGAAGTATGGCATCCGTGTTAATGCCGTTGCACCATTCATGACCCCA
ACTAGAATGACGGCTGGTTTGTCTCAAAGCTGGCAGGATGCTGGGCTCGA
GGCGAACACTCCTGAACGGGTGGCGGAGGTTATTGAGCAGGTCGGGATGG
ATACGGCCCGGAGGGGCTCTTGTATGCTGGTTGCTGGAAGATTTCTCAGG
GAGATGGAGTCGACGAGGATGGCATTGCTCCCGTCATGGCTAGGTCAAGA
TGTTGCGGATTTCATGGCGAAAGCAATGAAGTTCATTGCAGACATCGGAG
GCTATGTGCTTCCTGCTCGACTATAGATGACCCAACCCAAAACAATCCTC
ATAACCGGCGCCGCCGGAGGCATTGGCCTCGCCACATCCCGGCATTTCAA
CACCCTCCACCCCACCAGTACCATCATCCTCACTGATCTGCCCACTCACC
AAGAGGCCACTGAGTCCTTGATTCAGAGTACATTCCCGCACCCGGAAAAG
GCAGTCTTTCTCCCCGCTAATATTACGGACTGGGGGCGAATGACACATCT
ATTCAGGACGATTGCACAGAAATACGGCGGGGTGGATGTGGTGGTTGCAA
ATGCGGGAATGATGGAGTCTACGCCTGTTCTAGATTTGGAGGATATTGAT
GAGGAGACAGGGGAGTTGAGGGAGAGTTTGGAGGCAAGGAGGGTGGTGGA
TGTTAATCTGATGGGGACTTTGAATACTCTGCGATTGGCGATGTATCACA
TGAAAGAGAAGGAGAAGAAGAACGGTTCAATTGTGCTGGTGGCTTCTACG
TCGGGTTATTTTGGAGGCACGGGTGTCACAGCTTATGTGGCTTCCAAGCA
TGGTGTAGTGGGATTGCTTCGGGCGTCGCAAGTGACGGCGCAGAAGTATG
GCATCCGTGTTAATGCCGTTGCACCATTCATGACCCCAACTAGAATGACG
GCTGGTTTGTCTCAAAGCTGGCAGGATGCTGGGCTCGAGGCGAACACTCC
TGAACGGGTGGCGGAGGTTATTGAGCAGGTCGGGATGGATACGGCCCGGA
GGGGCTCTTGTATGCTGGTTGCTGGAAGATTTCTCAGGGAGATGGAGTCG
ACGAGGATGGCATTGCTCCCGTCATGGCTAGGTCAAGATGTTGCGGATTT
CATGGCGAAAGCAATGAAGTTCATTGCAGACATCGGAGGCTATGTGCTTC
CTGCTCGACTATAG
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_001153KJC3_001153Aspergillus niger KJC3gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001153-T1.exon1KJC3_001153-T1.exon1Aspergillus niger KJC3exon
KJC3_001153-T1.exon2KJC3_001153-T1.exon2Aspergillus niger KJC3exon
KJC3_001153-T1.exon3KJC3_001153-T1.exon3Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001153-T1.cdsKJC3_001153-T1.cdsAspergillus niger KJC3CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001153-T1KJC3_001153-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR036291
DBxrefInterPro:IPR002347
DBxrefPFAM:PF08659
DBxrefPFAM:PF13561
DBxrefPFAM:PF00106
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch1supercontigch1:2944327..2945339 +
Powered by Drupal