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KJC3_001156-T2, KJC3_001156-T2 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_001156-T2
Unique NameKJC3_001156-T2
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch1:2949398..2951864-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_001156-T2 ID=KJC3_001156-T2|Name=KJC3_001156-T2|organism=Aspergillus niger KJC3|type=mRNA|length=2467bp|location=Sequence derived from alignment at ch1:2949398..2951864- (Aspergillus niger KJC3)
CATTTGACTAGAAGACCGACTGGAGATATAGAGAGGCGTGGGGAGATACT
GGATCCATTAATAATCGAAACGGAAACGGTCTCAGTGGAGGCTAAACCTT
TCAAAGAAGCTGGATTCGTGATGCAAAATTGTTTCCCCCCCGGTTCCCCT
CTTGTTCTTCACCACTGATGAACAGCCCTAACTGTCGAGCACGTCCAGCC
TTCCATCCGTAACATCCTCAAACTACTAGCTACACCCTGATGGTCGGATT
CGGTATTTTCCCGACTATCATTGCCACAAGGACTCTGCCAAGACGGAGGA
ATTGCTTCTTTACAGAATTTCAATCGCGAGGTCCACCAGCCCGAGTGGAT
GGACTAGTTACTTTAGACTACCGTGACTAAGTGCGCCGGCGCGGGCATCA
TGAAACGCCGTAAATCCCCCGACTCCCTCCTAAGATCCACCTATGACCTT
CAACAGCCTGCAAGACAGTGGGCTGTCCAGCTCAGTGTCCACGAACAGGG
GCCATCACCGTGATGGACAACCATGTGGCTACGACTCCTCCCTCCCCCTT
CCAATCTTGGTTGTCATCGATGCCTATCACTCCATCCATGGTCCGATACG
ATGGACCCCCTTCAATCTACTTGCTCGGCCAGTACCGACTTTAGCGCCGG
TGGACTGACCGAGAAGAATCAACGGTTTTGCTCAATCGCCCTTGGCTACT
AATCAAAGATGCACTTGGCCGTTTCATACCGATCACCCGTCCAATTTACC
CAGAATGGGTCTGAGCCAGAGGGGAAGCTCTATCAGATTCTTGTCAAATG
CTTCCGTCAACGAGTCAGTCTTCCCTATAAAAGGCCCCAATCCCATCCGT
ATTGACCTCTTCTCTGTATCAAACCATTCCTTCCTTTTCTTTCCTTTTCT
CTTCATACCTCTATCTTCACCTTAGTCTTTCTTTCCCCTTCATAGCTGGT
TCTACACACTTCACCATGAAGTACTCTACTATCTTCAGCGCTGCTGCCGC
TGTTTTCGCTGGTTCCGCCGCTGCAGTCGGCGTGTCCGGCTCTGCTGAGG
GTTTCGCCGAGGGCGTCACCGGTGGCGGTGATGCCACCCCCGTCTACCCC
GACACTATCGATGAGCTGGTCTCTTACCTTGGAGACGATGAGGCCCGCGT
CATTGTCCTGACCAAGACCTTCGACTTCACCGACAGCGAAGGTACCACCA
CTGGCACTGGTTGCGCTCCCTGGGGTACCGCTTCCGCCTGCCAGGTTGCT
ATTGACCAGGACGACTGGTGCGAGAACTACGAGCCCGATGCTCCCTCTGT
CAGCGTTGAATAGTATGTCCTTGGGGATTGTCACCCGCTTCGATCTTGTA
TCTAACTTGGATAGCTACAACGCTGGTGTCCTCGGTATCACCGTCACCTC
CAACAAGTCCCTCATCGGTGAGGGCTCCTCTGGTGCAATCAAGGGCAAGG
GTCTCCGTATTGTCAGCGGTGCTGAGAACATCATCATCCAGTAGGTTATG
CTCGGTGTCATTAGGAATTTGCTCTCTAACGAAATCAGGAACATCGCGGT
TACCGACATCAACCCCAAGTACGTCTGGGGTGGTGATGCTATTACTCTTG
ATGACTGCGACCTGGTCTGGATCGACCATGTTACTGTACGTCTTCATCTT
ATTCAACTCTACATTATATTTCAAGAGCATTGAGTTAACATATGACAGAC
CGCCCGCATCGGTCGCCAGCACTACGTCCTTGGAACCAGCGCCGACAACC
GCGTCTCTCTCACCAACAACTACATTGACGGTGTCTCCGACTACTCCGCC
ACCTGCGATGGCTACCACTACTGGGGCATCTACCTCGATGGTGACGCCGA
CTTGGTCACCATGAAGGGCAACTACATCTACCACACCTCCGGCCGTAGCC
CCAAGGTCCAGGACAACACTCTCCTCCACTGTGTAAGTTGCCTTTTCTCT
GCTGGCCGCTTCCGACCTGACTAATCATTGTTGCAGGTCAACAACTACTT
CTACGACATCTCCGGCCACGCTTTTGAGATCGGTGAGGGTGGCTACGTCC
TGGCTGAGGGCAACGTTTTCCAGAACGTCGACACCGTCCTTGAGACCTAC
GAGGGCGCGGCCTTCACCGTCCCCTCCACCACCGCCGGTGAAGTCTGCTC
CACCTACCTTGGCCGTGACTGTGTCATCAACGGCTTCGGCTCCTCCGGCA
CTTTCTCCGAGGACAGCACCTCTTTCCTCTCCGACTTCGAGGGCAAGAAC
ATTGCCTCTGCTTCCGCTTACACCTCTGTTGCCTCTAGCGTTGTTGCTAA
CGCCGGTCAGGGCAACCTGTAAATGAGTTGACTCATTTATGGTAGATAGC
AGTGGATGTAATCAGGGGATGCGGCGTGCTTGAGAAGTTACCTTTCTTGT
ATCTACTTCTATAATAAATTATGGGGAGTGTTCACGACCCTAATCTGGTT
GAATAACCAGCCGACAC
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Coding sequence (CDS) from alignment at ch1:2949398..2951864-

>KJC3_001156-T2 ID=KJC3_001156-T2|Name=KJC3_001156-T2|organism=Aspergillus niger KJC3|type=CDS|length=3480bp|location=Sequence derived from alignment at ch1:2949398..2951864- (Aspergillus niger KJC3)
GTCAACAACTACTTCTACGACATCTCCGGCCACGCTTTTGAGATCGGTGA
GGGTGGCTACGTCCTGGCTGAGGGCAACGTTTTCCAGAACGTCGACACCG
TCCTTGAGACCTACGAGGGCGCGGCCTTCACCGTCCCCTCCACCACCGCC
GGTGAAGTCTGCTCCACCTACCTTGGCCGTGACTGTGTCATCAACGGCTT
CGGCTCCTCCGGCACTTTCTCCGAGGACAGCACCTCTTTCCTCTCCGACT
TCGAGGGCAAGAACATTGCCTCTGCTTCCGCTTACACCTCTGTTGCCTCT
AGCGTTGTTGCTAACGCCGGTCAGGGCAACCTGTAAACCGCCCGCATCGG
TCGCCAGCACTACGTCCTTGGAACCAGCGCCGACAACCGCGTCTCTCTCA
CCAACAACTACATTGACGGTGTCTCCGACTACTCCGCCACCTGCGATGGC
TACCACTACTGGGGCATCTACCTCGATGGTGACGCCGACTTGGTCACCAT
GAAGGGCAACTACATCTACCACACCTCCGGCCGTAGCCCCAAGGTCCAGG
ACAACACTCTCCTCCACTGTGAACATCGCGGTTACCGACATCAACCCCAA
GTACGTCTGGGGTGGTGATGCTATTACTCTTGATGACTGCGACCTGGTCT
GGATCGACCATGTTACTATGCTCCCTCTGTCAGCGTTGAATAGTATGTCC
TTGGGGATTGTCACCCGCTTCGATCTTGTATCTAACTTGGATAGCTACAA
CGCTGGTGTCCTCGGTATCACCGTCACCTCCAACAAGTCCCTCATCGGTG
AGGGCTCCTCTGGTGCAATCAAGGGCAAGGGTCTCCGTATTGTCAGCGGT
GCTGAGAACATCATCATCCAGTCAACAACTACTTCTACGACATCTCCGGC
CACGCTTTTGAGATCGGTGAGGGTGGCTACGTCCTGGCTGAGGGCAACGT
TTTCCAGAACGTCGACACCGTCCTTGAGACCTACGAGGGCGCGGCCTTCA
CCGTCCCCTCCACCACCGCCGGTGAAGTCTGCTCCACCTACCTTGGCCGT
GACTGTGTCATCAACGGCTTCGGCTCCTCCGGCACTTTCTCCGAGGACAG
CACCTCTTTCCTCTCCGACTTCGAGGGCAAGAACATTGCCTCTGCTTCCG
CTTACACCTCTGTTGCCTCTAGCGTTGTTGCTAACGCCGGTCAGGGCAAC
CTGTAAACCGCCCGCATCGGTCGCCAGCACTACGTCCTTGGAACCAGCGC
CGACAACCGCGTCTCTCTCACCAACAACTACATTGACGGTGTCTCCGACT
ACTCCGCCACCTGCGATGGCTACCACTACTGGGGCATCTACCTCGATGGT
GACGCCGACTTGGTCACCATGAAGGGCAACTACATCTACCACACCTCCGG
CCGTAGCCCCAAGGTCCAGGACAACACTCTCCTCCACTGTGAACATCGCG
GTTACCGACATCAACCCCAAGTACGTCTGGGGTGGTGATGCTATTACTCT
TGATGACTGCGACCTGGTCTGGATCGACCATGTTACTATGCTCCCTCTGT
CAGCGTTGAATAGTATGTCCTTGGGGATTGTCACCCGCTTCGATCTTGTA
TCTAACTTGGATAGCTACAACGCTGGTGTCCTCGGTATCACCGTCACCTC
CAACAAGTCCCTCATCGGTGAGGGCTCCTCTGGTGCAATCAAGGGCAAGG
GTCTCCGTATTGTCAGCGGTGCTGAGAACATCATCATCCAGTCAACAACT
ACTTCTACGACATCTCCGGCCACGCTTTTGAGATCGGTGAGGGTGGCTAC
GTCCTGGCTGAGGGCAACGTTTTCCAGAACGTCGACACCGTCCTTGAGAC
CTACGAGGGCGCGGCCTTCACCGTCCCCTCCACCACCGCCGGTGAAGTCT
GCTCCACCTACCTTGGCCGTGACTGTGTCATCAACGGCTTCGGCTCCTCC
GGCACTTTCTCCGAGGACAGCACCTCTTTCCTCTCCGACTTCGAGGGCAA
GAACATTGCCTCTGCTTCCGCTTACACCTCTGTTGCCTCTAGCGTTGTTG
CTAACGCCGGTCAGGGCAACCTGTAAACCGCCCGCATCGGTCGCCAGCAC
TACGTCCTTGGAACCAGCGCCGACAACCGCGTCTCTCTCACCAACAACTA
CATTGACGGTGTCTCCGACTACTCCGCCACCTGCGATGGCTACCACTACT
GGGGCATCTACCTCGATGGTGACGCCGACTTGGTCACCATGAAGGGCAAC
TACATCTACCACACCTCCGGCCGTAGCCCCAAGGTCCAGGACAACACTCT
CCTCCACTGTGAACATCGCGGTTACCGACATCAACCCCAAGTACGTCTGG
GGTGGTGATGCTATTACTCTTGATGACTGCGACCTGGTCTGGATCGACCA
TGTTACTATGCTCCCTCTGTCAGCGTTGAATAGTATGTCCTTGGGGATTG
TCACCCGCTTCGATCTTGTATCTAACTTGGATAGCTACAACGCTGGTGTC
CTCGGTATCACCGTCACCTCCAACAAGTCCCTCATCGGTGAGGGCTCCTC
TGGTGCAATCAAGGGCAAGGGTCTCCGTATTGTCAGCGGTGCTGAGAACA
TCATCATCCAGTCAACAACTACTTCTACGACATCTCCGGCCACGCTTTTG
AGATCGGTGAGGGTGGCTACGTCCTGGCTGAGGGCAACGTTTTCCAGAAC
GTCGACACCGTCCTTGAGACCTACGAGGGCGCGGCCTTCACCGTCCCCTC
CACCACCGCCGGTGAAGTCTGCTCCACCTACCTTGGCCGTGACTGTGTCA
TCAACGGCTTCGGCTCCTCCGGCACTTTCTCCGAGGACAGCACCTCTTTC
CTCTCCGACTTCGAGGGCAAGAACATTGCCTCTGCTTCCGCTTACACCTC
TGTTGCCTCTAGCGTTGTTGCTAACGCCGGTCAGGGCAACCTGTAAACCG
CCCGCATCGGTCGCCAGCACTACGTCCTTGGAACCAGCGCCGACAACCGC
GTCTCTCTCACCAACAACTACATTGACGGTGTCTCCGACTACTCCGCCAC
CTGCGATGGCTACCACTACTGGGGCATCTACCTCGATGGTGACGCCGACT
TGGTCACCATGAAGGGCAACTACATCTACCACACCTCCGGCCGTAGCCCC
AAGGTCCAGGACAACACTCTCCTCCACTGTGAACATCGCGGTTACCGACA
TCAACCCCAAGTACGTCTGGGGTGGTGATGCTATTACTCTTGATGACTGC
GACCTGGTCTGGATCGACCATGTTACTATGCTCCCTCTGTCAGCGTTGAA
TAGTATGTCCTTGGGGATTGTCACCCGCTTCGATCTTGTATCTAACTTGG
ATAGCTACAACGCTGGTGTCCTCGGTATCACCGTCACCTCCAACAAGTCC
CTCATCGGTGAGGGCTCCTCTGGTGCAATCAAGGGCAAGGGTCTCCGTAT
TGTCAGCGGTGCTGAGAACATCATCATCCA
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_001156KJC3_001156Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001156-T2KJC3_001156-T2-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001156-T2.cdsKJC3_001156-T2.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001156-T2.utr3p1KJC3_001156-T2.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001156-T2.exon6KJC3_001156-T2.exon6Aspergillus niger KJC3exon
KJC3_001156-T2.exon5KJC3_001156-T2.exon5Aspergillus niger KJC3exon
KJC3_001156-T2.exon4KJC3_001156-T2.exon4Aspergillus niger KJC3exon
KJC3_001156-T2.exon3KJC3_001156-T2.exon3Aspergillus niger KJC3exon
KJC3_001156-T2.exon2KJC3_001156-T2.exon2Aspergillus niger KJC3exon
KJC3_001156-T2.exon1KJC3_001156-T2.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001156-T2.utr5p3KJC3_001156-T2.utr5p3Aspergillus niger KJC3five_prime_UTR
KJC3_001156-T2.utr5p2KJC3_001156-T2.utr5p2Aspergillus niger KJC3five_prime_UTR
KJC3_001156-T2.utr5p1KJC3_001156-T2.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
NoteCAZy:PL1
NoteCAZy:PL1_4
DBxrefInterPro:IPR011050
DBxrefInterPro:IPR012334
DBxrefInterPro:IPR002022
DBxrefPFAM:PF00544
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch1supercontigch1:2949398..2951864 -
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