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KJC3_001160-T1, KJC3_001160-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_001160-T1
Unique NameKJC3_001160-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch1:2961344..2962276+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_001160-T1 ID=KJC3_001160-T1|Name=KJC3_001160-T1|organism=Aspergillus niger KJC3|type=mRNA|length=933bp|location=Sequence derived from alignment at ch1:2961344..2962276+ (Aspergillus niger KJC3)
CTAATTAGTACAACTATAAGAATGCGTCCGGCAAACAAATTAATAAAGTG
TTCTGCTCTAAGCTACACATCGCTGAAGACAGCTACTCAAACGCTTAATT
TCGACATCACTCTATAGTACCTGTTACAATGGCTGAAAAGGCGAACCCTC
GTGCGTTCATCCAAGAAAATGTATGTGTACGCCTCTAACGTTGACAGCAG
CAGTCCCTGCCTACGAGGAACAACCGGCCGAAACCCACGAGCTTTCCTCC
TCCAGAGAGGTGCCTGCATATACGCAACCTCCCGCGGGACAAACGCCCGA
AATCCAACCGCATCAGCCCCAGCAGACCTTTTATGCAGGCTCTCAACACC
CGAGCGGCTATAATACTCCGACTCCGCTGTATGCCCTGCAGAAAACACCA
GCACCCGTGGATTGTCCGGCTTGCGGAGAGCGGAAAATGACTCGCGTGGA
GGCAGAAACGGGGAGTTCAACTCAGTATGTGCACGTGCTCCATAATGGTG
AACCAAACTGACAATGTCCATAGTGCTTGGGCTGCCGTGCTTTGCTGCTG
CCTGTGTCTCGGATGTATTCCATACATGATGTCGTCGCTAAAGAATCAGT
GTCATTACTGTGGGGGTTGTGGTGCCTTGTTGGCTACATGGCATAACAGT
GGACGAACGGATGTGCATCGGTCTGGTGCGAAGTGATGCGATTGTTTTGC
TGTTGCCTATGTCTTTTCTCGTTCTTTATGTGATACCACTATGACTCTTT
TACCATACCATGTTTGGACATACTTATTGTGATGCCTGGGAAGCATTTGC
CTGTCTATAGACTACGCGAAGGCACATATGTCTGGTGCCTGACCTATGGG
TAAATGTACACTCTAACATGACTTATCAGGACTCCAACCTTCCTTTCGCT
TTCTTAGTATTATCAACTTCGTCGATTTTGCAG
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Coding sequence (CDS) from alignment at ch1:2961344..2962276+

>KJC3_001160-T1 ID=KJC3_001160-T1|Name=KJC3_001160-T1|organism=Aspergillus niger KJC3|type=CDS|length=1368bp|location=Sequence derived from alignment at ch1:2961344..2962276+ (Aspergillus niger KJC3)
ATGGCTGAAAAGGCGAACCCTCTCCCTGCCTACGAGGAACAACCGGCCGA
AACCCACGAGCTTTCCTCCTCCAGAGAGGTGCCTGCATATACGCAACCTC
CCGCGGGACAAACGCCCGAAATCCAACCGCATCAGCCCCAGCAGACCTTT
TATGCAGGCTCTCAACACCCGAGCGGCTATAATACTCCGACTCCGCTGTA
TGCCCTGCAGAAAACACCAGCACCCGTGGATTGTCCGGCTTGCGGAGAGC
GGAAAATGACTCGCGTGGAGGCAGAAACGGGGAGTTCAACTCATGCTTGG
GCTGCCGTGCTTTGCTGCTGCCTGTGTCTCGGATGTATTCCATACATGAT
GTCGTCGCTAAAGAATCAGTGTCATTACTGTGGGGGTTGTGGTGCCTTGT
TGGCTACATGGCATAACAGTGGACGAACGGATGTGCATCGGTCTGGTGCG
AAGTGAATGGCTGAAAAGGCGAACCCTCTCCCTGCCTACGAGGAACAACC
GGCCGAAACCCACGAGCTTTCCTCCTCCAGAGAGGTGCCTGCATATACGC
AACCTCCCGCGGGACAAACGCCCGAAATCCAACCGCATCAGCCCCAGCAG
ACCTTTTATGCAGGCTCTCAACACCCGAGCGGCTATAATACTCCGACTCC
GCTGTATGCCCTGCAGAAAACACCAGCACCCGTGGATTGTCCGGCTTGCG
GAGAGCGGAAAATGACTCGCGTGGAGGCAGAAACGGGGAGTTCAACTCAT
GCTTGGGCTGCCGTGCTTTGCTGCTGCCTGTGTCTCGGATGTATTCCATA
CATGATGTCGTCGCTAAAGAATCAGTGTCATTACTGTGGGGGTTGTGGTG
CCTTGTTGGCTACATGGCATAACAGTGGACGAACGGATGTGCATCGGTCT
GGTGCGAAGTGAATGGCTGAAAAGGCGAACCCTCTCCCTGCCTACGAGGA
ACAACCGGCCGAAACCCACGAGCTTTCCTCCTCCAGAGAGGTGCCTGCAT
ATACGCAACCTCCCGCGGGACAAACGCCCGAAATCCAACCGCATCAGCCC
CAGCAGACCTTTTATGCAGGCTCTCAACACCCGAGCGGCTATAATACTCC
GACTCCGCTGTATGCCCTGCAGAAAACACCAGCACCCGTGGATTGTCCGG
CTTGCGGAGAGCGGAAAATGACTCGCGTGGAGGCAGAAACGGGGAGTTCA
ACTCATGCTTGGGCTGCCGTGCTTTGCTGCTGCCTGTGTCTCGGATGTAT
TCCATACATGATGTCGTCGCTAAAGAATCAGTGTCATTACTGTGGGGGTT
GTGGTGCCTTGTTGGCTACATGGCATAACAGTGGACGAACGGATGTGCAT
CGGTCTGGTGCGAAGTGA
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_001160KJC3_001160Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001160-T1KJC3_001160-T1-proteinAspergillus niger KJC3polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001160-T1.utr5p1KJC3_001160-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001160-T1.exon1KJC3_001160-T1.exon1Aspergillus niger KJC3exon
KJC3_001160-T1.exon2KJC3_001160-T1.exon2Aspergillus niger KJC3exon
KJC3_001160-T1.exon3KJC3_001160-T1.exon3Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001160-T1.cdsKJC3_001160-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001160-T1.utr3p1KJC3_001160-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR006629
DBxrefPFAM:PF10601
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch1supercontigch1:2961344..2962276 +
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