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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch1:2966911..2968885- Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_001164-T1 ID=KJC3_001164-T1|Name=KJC3_001164-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1975bp|location=Sequence derived from alignment at ch1:2966911..2968885- (Aspergillus niger KJC3)
GAATCAATAGACTTCTAAGCTTAAAACCCATCTTATATATTTGCTAGAGA
TCTTTAATTTTTTTCTGCGCTGCTTCTGTTGTACGTGCTCGAACTGCAAA
CCACCGAGCAAGCGCTTCCACTTTAGCTGTCTACTACATTACCATACCCA
CTCAGCCCTTGCTGCCCATTCAGCACACCATATCAGAATGCCACGCCATC
TCTCTGAAATCCTAAAAGTCTACCCAGAAGACGAGCCCTGGTGTGCTGGC
TTTGCCCCCTCGCAAGGCCGTCGCTGCCACAACCCCACAAATGCCAGAAA
CCGCCGACATGCCAGTTCCCTCCTCGAACAAGGAACCCGCTTGCTCAGGG
CCGGCCAATCTATCGAGCATATACTTGAGGACTTGGCTCCTCTCGTCCTC
TGCACAAGAAATCACCAGAACCAAGCTGTCGGCTTAACTAATACTTGGGT
CTCACGAGTCGATACATATGTCGCGAAACATCGTTCTACTCCTAGGAGCG
TGCCGAGTAAATCGACTCCTCGGCGGTCGCCATCACCAACGATGCGTAAC
GACACAAGTATAGAGGATCGACTTGCGGAACTCGAAAGGAAGATGCAGGA
TGCAATTCGTAAGGCAGAGAGAGCACAGCGGGAGAAAGAACGGGCGGAGA
GAGAGGCAGAGCGGACTAGACGGGATACCGAAAATATGGTCAGGAGAAGT
GCGGCTATGGGATATGCCAGAGGACAGGAAGAAGCAAGAAGAAGAAGAAG
CTCTCCTCCCCCTACTGTTGAGATTGAGACGACTACGGTTGAGCACAACG
AGGAATACGGAGTGCAGAGAAACTCGATGTCGAGTGGCTTGCTGTCTTCA
CAGAGGCAGGACCCTCGTGGAGGGAGTGTCGAGACGACCTTGCAGGTCAA
CACTTCAACCAGCACGAACTTGCAACTCCGCAGAAGCACTATCGTGAGCA
CGACCAGGGTACAGAGGACAAGCGATGCCCCAGCTACTCCCGCTCAAGCT
GAACGACATGCTGCCACCCCGAGCTCTGAACCCAGAATAGTCGAAATCGA
TGACACCAGCGATGCACTAGCCACCCTGTCCCCTGCCCAGCGAAGCAACA
ACAATGCTACCTCCGGCTCCAGCAGCACAATCCCAAGAAGAGCAATCGGC
CTCCCCAGCGCAGATCCCGAGTCTACCATCACCACAACTGCATCTACCAA
TCCAGACCATCCTTCATCCACAAACACCCAAGAATCCACCCCTCCTACGG
AAACCCCAGAAACCTCCACCCCAACCCTTCAACTCCCAAGCCCTCCTACC
TCAAACAACGAAGAACCTCCCTCTACTCCCACAGACACACAGGAAACCAC
AACCCAGACTACCTCTACATCCACATCTACCCCTCAACACCACCTCCTCA
CACCCCCATCAACTCCCCCTCCCTCCATCCCACCCACAATCTCAAATTGC
GGCATAACCCGCCAACCCATCGAAGGTGACTGCTGCATCTGCATCTGCCC
TCTAGACGAAGAAGACTCTACCTCGCTCGTCTGGTGCCAGAAACAATGCG
GGAGTAACTTCCACCGCGAGTGTATGGATCGGTGGCTAGCCTCGTCACTT
GACGCGAACCGGCAAACGAGTTGTCCGATGTGTCGGGGGAAGTGGTAGTG
GTTTTTCCTTTGTCAGTTTCTTTCTTGTACTTGATTTGGGTGTTCATTGG
GTGGTAGGATCGGAGTTTGGGATATTCCTGTTGGTTGTTACATGAGTTAT
GATATATGGTTTTATGATTTGATGTGATGTGATGTGATATCCTTGGTTCT
GTTTGTTGATTACTAGTTGGGTCGGGTTCTTGGTGATGATGGGTAATACT
TTAAATGATTAGCTCGTTAGTGCTGTTTACTGTGATACTTAGGTTGCATG
TTATATTCGTATGCATAGTTGTATGATGTCCAAGCTCGTAGGCTACAGAT
AGAGACTGCATGAACTCGGTCATTC back to topCoding sequence (CDS) from alignment at ch1:2966911..2968885- >KJC3_001164-T1 ID=KJC3_001164-T1|Name=KJC3_001164-T1|organism=Aspergillus niger KJC3|type=CDS|length=1461bp|location=Sequence derived from alignment at ch1:2966911..2968885- (Aspergillus niger KJC3)
ATGCCACGCCATCTCTCTGAAATCCTAAAAGTCTACCCAGAAGACGAGCC
CTGGTGTGCTGGCTTTGCCCCCTCGCAAGGCCGTCGCTGCCACAACCCCA
CAAATGCCAGAAACCGCCGACATGCCAGTTCCCTCCTCGAACAAGGAACC
CGCTTGCTCAGGGCCGGCCAATCTATCGAGCATATACTTGAGGACTTGGC
TCCTCTCGTCCTCTGCACAAGAAATCACCAGAACCAAGCTGTCGGCTTAA
CTAATACTTGGGTCTCACGAGTCGATACATATGTCGCGAAACATCGTTCT
ACTCCTAGGAGCGTGCCGAGTAAATCGACTCCTCGGCGGTCGCCATCACC
AACGATGCGTAACGACACAAGTATAGAGGATCGACTTGCGGAACTCGAAA
GGAAGATGCAGGATGCAATTCGTAAGGCAGAGAGAGCACAGCGGGAGAAA
GAACGGGCGGAGAGAGAGGCAGAGCGGACTAGACGGGATACCGAAAATAT
GGTCAGGAGAAGTGCGGCTATGGGATATGCCAGAGGACAGGAAGAAGCAA
GAAGAAGAAGAAGCTCTCCTCCCCCTACTGTTGAGATTGAGACGACTACG
GTTGAGCACAACGAGGAATACGGAGTGCAGAGAAACTCGATGTCGAGTGG
CTTGCTGTCTTCACAGAGGCAGGACCCTCGTGGAGGGAGTGTCGAGACGA
CCTTGCAGGTCAACACTTCAACCAGCACGAACTTGCAACTCCGCAGAAGC
ACTATCGTGAGCACGACCAGGGTACAGAGGACAAGCGATGCCCCAGCTAC
TCCCGCTCAAGCTGAACGACATGCTGCCACCCCGAGCTCTGAACCCAGAA
TAGTCGAAATCGATGACACCAGCGATGCACTAGCCACCCTGTCCCCTGCC
CAGCGAAGCAACAACAATGCTACCTCCGGCTCCAGCAGCACAATCCCAAG
AAGAGCAATCGGCCTCCCCAGCGCAGATCCCGAGTCTACCATCACCACAA
CTGCATCTACCAATCCAGACCATCCTTCATCCACAAACACCCAAGAATCC
ACCCCTCCTACGGAAACCCCAGAAACCTCCACCCCAACCCTTCAACTCCC
AAGCCCTCCTACCTCAAACAACGAAGAACCTCCCTCTACTCCCACAGACA
CACAGGAAACCACAACCCAGACTACCTCTACATCCACATCTACCCCTCAA
CACCACCTCCTCACACCCCCATCAACTCCCCCTCCCTCCATCCCACCCAC
AATCTCAAATTGCGGCATAACCCGCCAACCCATCGAAGGTGACTGCTGCA
TCTGCATCTGCCCTCTAGACGAAGAAGACTCTACCTCGCTCGTCTGGTGC
CAGAAACAATGCGGGAGTAACTTCCACCGCGAGTGTATGGATCGGTGGCT
AGCCTCGTCACTTGACGCGAACCGGCAAACGAGTTGTCCGATGTGTCGGG
GGAAGTGGTAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0008270 | zinc ion binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_001164-T1.utr3p1 | KJC3_001164-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_001164-T1.utr5p1 | KJC3_001164-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR001841 |
| DBxref | InterPro:IPR013083 |
| DBxref | InterPro:IPR024766 |
| DBxref | PFAM:PF13639 |
| DBxref | PFAM:PF12678 |
| DBxref | PFAM:PF12861 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch1 | supercontig | ch1:2966911..2968885 - |
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