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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch1:2972473..2973443+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_001166-T1 ID=KJC3_001166-T1|Name=KJC3_001166-T1|organism=Aspergillus niger KJC3|type=mRNA|length=971bp|location=Sequence derived from alignment at ch1:2972473..2973443+ (Aspergillus niger KJC3)
ATGGCTACCACTCTACTCATCACTGGAGCCACCGGAAACCAAGGGGGTGC
GGTCATTAATGCTCTGCTGGCGCAGGACGCAGACGTTGAGATCCTCGCCG
TGACCCGCAACCCGCAGTCAGGAACATCGCAGAAGCTTGCCGGAAAGTCT
CCCAAAATTAAGCTAGTTCAGGGCGACCTTGATCATCCATCGGAGATCTT
CGAAAATGCGAAGAAACTCGCCACTCGGCCCATCTCTGGGGTCTTTAGCG
TTCAGGTAGTCTCCAGCCATATGCTTTCCACCCACCCGCGGTAATAGTTA
ACGCAAGATAGAACCCTATGGCGAAAGGTCAAAATGTAGACAAAGAAGAA
GTCCAAGGTAAAGCCTTGGTTGATGAATCCATCAAGCAAGACATCAGACA
CTTTGTCTACAGCTCCGTCGATCGCGGTGGTGATGCCTCCACGGACAATC
CAACCAATATCCCTCATTTCATCAGCAAACATCGCATCGAACACCATCTG
TTCGAGCAAACCAAGGATGGAGCCATGACATGGACTGTCCTCCGTCCGGT
GTTCTTTTTCGAGAACCTTGTCCCGAGCTTCATAGGCAAGCTGAGCGCCA
CAGCCTGGGATGCCTACCTGCAGGGCAAACCGCTGCAGTGCGTTGCGGTC
AGCGATATTGGGGTGTTTGCAGCCAAGGCTCTTCTCGAGCCACAAAACTA
CAAGAATCAGTGTATTTCTCTCGCCGGAGATGACTTGACATTCGAACATA
TGCAGAAGTTGTTCAAGGCGAAAACGGGGGAGACGATGCCAACCACATAC
CGGGTGGTCTGTTATGTACTGATGTGGATGGTCACTGATTTGCGGCTTAT
GTTCAACTGGTTCTACAGTCATGGCTACGGTGCAGATATTCAGGGTCTAA
GGAAGATACATCCTGGCCTGAAGAACTTTGAAGCGTGGCTGGAAGAGGAC
AGCGAATGGGTGAAGCACTGA back to topCoding sequence (CDS) from alignment at ch1:2972473..2973443+ >KJC3_001166-T1 ID=KJC3_001166-T1|Name=KJC3_001166-T1|organism=Aspergillus niger KJC3|type=CDS|length=1830bp|location=Sequence derived from alignment at ch1:2972473..2973443+ (Aspergillus niger KJC3)
ATGGCTACCACTCTACTCATCACTGGAGCCACCGGAAACCAAGGGGGTGC
GGTCATTAATGCTCTGCTGGCGCAGGACGCAGACGTTGAGATCCTCGCCG
TGACCCGCAACCCGCAGTCAGGAACATCGCAGAAGCTTGCCGGAAAGTCT
CCCAAAATTAAGCTAGTTCAGGGCGACCTTGATCATCCATCGGAGATCTT
CGAAAATGCGAAGAAACTCGCCACTCGGCCCATCTCTGGGGTCTTTAGCG
TTCAGAACCCTATGGCGAAAGGTCAAAATGTAGACAAAGAAGAAGTCCAA
GGTAAAGCCTTGGTTGATGAATCCATCAAGCAAGACATCAGACACTTTGT
CTACAGCTCCGTCGATCGCGGTGGTGATGCCTCCACGGACAATCCAACCA
ATATCCCTCATTTCATCAGCAAACATCGCATCGAACACCATCTGTTCGAG
CAAACCAAGGATGGAGCCATGACATGGACTGTCCTCCGTCCGGTGTTCTT
TTTCGAGAACCTTGTCCCGAGCTTCATAGGCAAGCTGAGCGCCACAGCCT
GGGATGCCTACCTGCAGGGCAAACCGCTGCAGTGCGTTGCGGTCAGCGAT
ATTGGGGTGTTTGCAGCCAAGGCTCTTCTCGAGCCACAAAACTACAAGAA
TCAGTGTATTTCTCTCGCCGGAGATGACTTGACATTCGAACATATGCAGA
AGTTGTTCAAGGCGAAAACGGGGGAGACGATGCCAACCACATACCGGGTG
GTCTGTTATGTACTGATGTGGATGGTCACTGATTTGCGGCTTATGTTCAA
CTGGTTCTACAGTCATGGCTACGGTGCAGATATTCAGGGTCTAAGGAAGA
TACATCCTGGCCTGAAGAACTTTGAAGCGTGGCTGGAAGAGGACAGCGAA
TGGGTGAAGCACTGAATGGCTACCACTCTACTCATCACTGGAGCCACCGG
AAACCAAGGGGGTGCGGTCATTAATGCTCTGCTGGCGCAGGACGCAGACG
TTGAGATCCTCGCCGTGACCCGCAACCCGCAGTCAGGAACATCGCAGAAG
CTTGCCGGAAAGTCTCCCAAAATTAAGCTAGTTCAGGGCGACCTTGATCA
TCCATCGGAGATCTTCGAAAATGCGAAGAAACTCGCCACTCGGCCCATCT
CTGGGGTCTTTAGCGTTCAGAACCCTATGGCGAAAGGTCAAAATGTAGAC
AAAGAAGAAGTCCAAGGTAAAGCCTTGGTTGATGAATCCATCAAGCAAGA
CATCAGACACTTTGTCTACAGCTCCGTCGATCGCGGTGGTGATGCCTCCA
CGGACAATCCAACCAATATCCCTCATTTCATCAGCAAACATCGCATCGAA
CACCATCTGTTCGAGCAAACCAAGGATGGAGCCATGACATGGACTGTCCT
CCGTCCGGTGTTCTTTTTCGAGAACCTTGTCCCGAGCTTCATAGGCAAGC
TGAGCGCCACAGCCTGGGATGCCTACCTGCAGGGCAAACCGCTGCAGTGC
GTTGCGGTCAGCGATATTGGGGTGTTTGCAGCCAAGGCTCTTCTCGAGCC
ACAAAACTACAAGAATCAGTGTATTTCTCTCGCCGGAGATGACTTGACAT
TCGAACATATGCAGAAGTTGTTCAAGGCGAAAACGGGGGAGACGATGCCA
ACCACATACCGGGTGGTCTGTTATGTACTGATGTGGATGGTCACTGATTT
GCGGCTTATGTTCAACTGGTTCTACAGTCATGGCTACGGTGCAGATATTC
AGGGTCTAAGGAAGATACATCCTGGCCTGAAGAACTTTGAAGCGTGGCTG
GAAGAGGACAGCGAATGGGTGAAGCACTGA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036291 |
| DBxref | InterPro:IPR008030 |
| DBxref | PFAM:PF05368 |
| DBxref | PFAM:PF13460 |
| DBxref | PFAM:PF01370 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch1 | supercontig | ch1:2972473..2973443 + |
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