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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch1:2976307..2979142- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_001167-T1 ID=KJC3_001167-T1|Name=KJC3_001167-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2836bp|location=Sequence derived from alignment at ch1:2976307..2979142- (Aspergillus niger KJC3)
GTCAGTCGGTCAGCAGCCCATCTCCGCATTCCCTTCTCCTCACGCATCTC
AGGGGTTTGCTGGTTTCCAGTCTCGATGTCTGGGAGGACTTATTCGATGT
GCTGAAGGCCTATGGTTCTTCTTTCCCTCCCTTATCTCGTGTTGATTGAT
CTTCTTGATTTGCTGCCTTCTGATTTCCGTTTGCGGAGGACTATTTTGCG
GAGAAGTGAAAAGGCAGGCCCATCTTGCCAGGCACGCTGTTATCTTGCCC
CTGGTCGGACCCGAAAACACTCTACCCAGGCAGTTATTGCCCGCTTGAGG
CCCTTCAAAGAACCATAATTTGCGAACACTCGTCCTCATCCAGATCGCGC
TATCACGGCCGAAGGGGGAGACACTATGACGCCATCCCGTGATAAGCCCG
ATTCAGCTATCGACAAGAGGGATTTTGATGCTCATCGCCCGTTACTCGAT
GATGCAGATGCTGAGGCGGATGAGCAACAACGAGGACACCTACGGTCACG
GCCACAGTCGTGTTTATCGGCCACCAACAATGACGATGGTCTCCTGAATG
ATGTTGTCGACGAGATCCTAGAAAGGGATAGAAAGAAGATGGCCAAGGAA
GTGGTGCGAGTTAGCAGTTTTGCGTGGGGAGTTATTAGCTGGTAAGATCT
CTTGTGCGTAAATAGGATGCGCTAATCACCCCCCTCGTTGGATGGGTGGC
TAATTGGCATTGTGATCATTAGTCTTGGAGCTGGTAGCATTACCGCATTC
TCGCTCTACGGACCCCTGTTGCTCACTCGTCTCCACTACACTCAACTCCG
GGTCAATGCTGTCGCAATCGCCGCGGAGGTCTCGATGTACTTACCTGTCC
CGCTGTTTGGATATCTGTGTGATCGGTACAGCCCATCTCCGCTGGCCTTA
TTCTCTGGTTTCGTGTTTGGGGCTGGGTACCTTCTGGCTGCACTGGCCTT
CAAGAGTGGACCACCTCCTGATGCAGGTGGCGACGGCTGGCCATTTTGGG
TGATGATTGTGGCATTCATCGCCATTGGCGTTGCTACCAGTTGCATGTAC
TTGGCTGCGGTCGCAACATGTGCCAAAAATTTCGGCAGGGGTAAGCATAA
GGGAATCATGCTTGCTGTTCCTATCGCGGGTTTTGGCCTTAGTGGCATGT
GGCAAAGCCAAGTAGGAACGTACTTCCTATGTGACCGTCTTGAGGATGGT
ACGCGTGGGGATGTCAATGTATATAAGTACTTCTTGTTTCTCGCCATCCT
GTTGTTCTGCGTTGGTGTAATTGGCACCTTTGCCCTCAGGATCGTGGATG
AGAACGAAGACAAGTACATTGACGAGGCGGTAGAGGAGTTGGAGCGCAGT
GGCCTCCTTGAGGAGAGCGAGTTCTTCCGGCCCAGGAACGACGACAGAAC
CGCATATGGAACGTTTTCGCAGGCCGAGGACGGCACCGGATCCGATGGAG
ACCAAACTCTGACACTGTCAGAAGAGGAGCGAGAAGCAGCAAGACTTGAG
AAGGAAAGGGAAGAAGAAGAACGCCGGAAGAAGAACTGGCTGCTGAACTA
CGAGACGAGGATCTTCCTCCAGGACAAGTCAATGTGGTGGCTTGCCATTG
GCTTCTTCCTGGTCACTGGGCCAGGAGAGGCATATATCAATAACGTATGT
TGCGTCCATATACTGACTATGCCATCAAAGCATCTCACTCTGACTGACAC
GCTCTCTAGCTGGGCACTATTGTCCAATCCTTGACTCCTGTATCAAATAT
TACAAATGCCTCGTCACCTGCAGGCTTACCATCAACCCATGTCAGCACCA
TCGCGCTGACCTCGACCATTGCCCGACTTCTCACCGGCTCGCTCTCCGAC
CTCTTCGCCCCTCCAGCAACTCATCTCTTCCCTGGTCCGAGTAGCCGCCC
TGCCTCCATCACATCGGATACCAATCGCACCACCTTCACCCGCCTTGCAT
TTCTCCTCCCCTCCGCCTTCCTCCTCTCCATCGGCTATCTCCTTCTCTCC
TCCCCGATTCTTCTCTACCACCCCGGATTCACCCACCTTACCACAGCCCT
GATTGGTCTCGGCTACGGCAGTGCCTTTTCTCTCGTCCCGATTATCATCT
CTGTCGTCTGGGGAGTCGAGAACTTTGCCACCAACTGGGGTATCGTTGCC
ATGGTTCCAGCCGCCGGAGCCGCCGTCTGGGGTTTGGTCTATTCGCAAGG
GTACCAGGATGCCATGGACGACGGAAATGGCACGAATGACGGCCAATGTC
ATGGCTGGAGGTGCTTTGGATTCTGGGCCGTGGGATGTACGGTAAGCGTT
TGGATCGCCATTGGGGCTTGGTTGATTGCGTGGAGGTATTGGAGACGACG
AGGAGTTGTTGTTTAAATCCATAGAATTGTCTTCTTTTTCCCCCCCTAGC
CTACCTCATTTTGGGTATGCTTAAGCCATGTTGGTGTTGCTCATTATATT
AGCCGCTCATTGCGTTGTCTTCCCTTCTTCTTCATATACCTTCATTCGAA
GCGGCGCAACTACCCTAATACGGGTAGTATTGACTTACACATTCGCTGAT
TGATGGTCCAAGTTGCTATTGCTACTTTAGCGGGGAGGGGTTTCGGGTCG
TTCGTTTTACCACACCATACTTATACATATACGTCTTATCGGGCTACTAG
AATATCGTTTGATTATCTACCTATATTATATATGCATTGCATACCATGCA
TGGCTTTGAGCTGAACTGATTGAATGATGCTCACTATCAAATAGCCACAC
GCGGCATGCCTACGGTGATTACATCAAAGACCGCTTCATCGTGGAACTCT
ATACTAAATCCGATATACTGGCTACTAGGTCATGGA back to topCoding sequence (CDS) from alignment at ch1:2976307..2979142- >KJC3_001167-T1 ID=KJC3_001167-T1|Name=KJC3_001167-T1|organism=Aspergillus niger KJC3|type=CDS|length=5535bp|location=Sequence derived from alignment at ch1:2976307..2979142- (Aspergillus niger KJC3)
CTGGGCACTATTGTCCAATCCTTGACTCCTGTATCAAATATTACAAATGC
CTCGTCACCTGCAGGCTTACCATCAACCCATGTCAGCACCATCGCGCTGA
CCTCGACCATTGCCCGACTTCTCACCGGCTCGCTCTCCGACCTCTTCGCC
CCTCCAGCAACTCATCTCTTCCCTGGTCCGAGTAGCCGCCCTGCCTCCAT
CACATCGGATACCAATCGCACCACCTTCACCCGCCTTGCATTTCTCCTCC
CCTCCGCCTTCCTCCTCTCCATCGGCTATCTCCTTCTCTCCTCCCCGATT
CTTCTCTACCACCCCGGATTCACCCACCTTACCACAGCCCTGATTGGTCT
CGGCTACGGCAGTGCCTTTTCTCTCGTCCCGATTATCATCTCTGTCGTCT
GGGGAGTCGAGAACTTTGCCACCAACTGGGGTATCGTTGCCATGGTTCCA
GCCGCCGGAGCCGCCGTCTGGGGTTTGGTCTATTCGCAAGGGTACCAGGA
TGCCATGGACGACGGAAATGGCACGAATGACGGCCAATGTCATGGCTGGA
GGTGCTTTGGATTCTGGGCCGTGGGATGTACGGTAAGCGTTTGGATCGCC
ATTGGGGCTTGGTTGATTGCGTGGAGGTATTGGAGACGACGAGGAGTTGT
TGTTTAATCTTGGAGCTGGTAGCATTACCGCATTCTCGCTCTACGGACCC
CTGTTGCTCACTCGTCTCCACTACACTCAACTCCGGGTCAATGCTGTCGC
AATCGCCGCGGAGGTCTCGATGTACTTACCTGTCCCGCTGTTTGGATATC
TGTGTGATCGGTACAGCCCATCTCCGCTGGCCTTATTCTCTGGTTTCGTG
TTTGGGGCTGGGTACCTTCTGGCTGCACTGGCCTTCAAGAGTGGACCACC
TCCTGATGCAGGTGGCGACGGCTGGCCATTTTGGGTGATGATTGTGGCAT
TCATCGCCATTGGCGTTGCTACCAGTTGCATGTACTTGGCTGCGGTCGCA
ACATGTGCCAAAAATTTCGGCAGGGGTAAGCATAAGGGAATCATGCTTGC
TGTTCCTATCGCGGGTTTTGGCCTTAGTGGCATGTGGCAAAGCCAAGTAG
GAACGTACTTCCTATGTGACCGTCTTGAGGATGGTACGCGTGGGGATGTC
AATGTATATAAGTACTTCTTGTTTCTCGCCATCCTGTTGTTCTGCGTTGG
TGTAATTGGCACCTTTGCCCTCAGGATCGTGGATGAGAACGAAGACAAGT
ACATTGACGAGGCGGTAGAGGAGTTGGAGCGCAGTGGCCTCCTTGAGGAG
AGCGAGTTCTTCCGGCCCAGGAACGACGACAGAACCGCATATGGAACGTT
TTCGCAGGCCGAGGACGGCACCGGATCCGATGGAGACCAAACTCTGACAC
TGTCAGAAGAGGAGCGAGAAGCAGCAAGACTTGAGAAGGAAAGGGAAGAA
GAAGAACGCCGGAAGAAGAACTGGCTGCTGAACTACGAGACGAGGATCTT
CCTCCAGGACAAGTCAATGTGGTGGCTTGCCATTGGCTTCTTCCTGGTCA
CTGGGCCAGGAGAGGCATATATCAATAACATGACGCCATCCCGTGATAAG
CCCGATTCAGCTATCGACAAGAGGGATTTTGATGCTCATCGCCCGTTACT
CGATGATGCAGATGCTGAGGCGGATGAGCAACAACGAGGACACCTACGGT
CACGGCCACAGTCGTGTTTATCGGCCACCAACAATGACGATGGTCTCCTG
AATGATGTTGTCGACGAGATCCTAGAAAGGGATAGAAAGAAGATGGCCAA
GGAAGTGGTGCGAGTTAGCAGTTTTGCGTGGGGAGTTATTAGCTGCTGGG
CACTATTGTCCAATCCTTGACTCCTGTATCAAATATTACAAATGCCTCGT
CACCTGCAGGCTTACCATCAACCCATGTCAGCACCATCGCGCTGACCTCG
ACCATTGCCCGACTTCTCACCGGCTCGCTCTCCGACCTCTTCGCCCCTCC
AGCAACTCATCTCTTCCCTGGTCCGAGTAGCCGCCCTGCCTCCATCACAT
CGGATACCAATCGCACCACCTTCACCCGCCTTGCATTTCTCCTCCCCTCC
GCCTTCCTCCTCTCCATCGGCTATCTCCTTCTCTCCTCCCCGATTCTTCT
CTACCACCCCGGATTCACCCACCTTACCACAGCCCTGATTGGTCTCGGCT
ACGGCAGTGCCTTTTCTCTCGTCCCGATTATCATCTCTGTCGTCTGGGGA
GTCGAGAACTTTGCCACCAACTGGGGTATCGTTGCCATGGTTCCAGCCGC
CGGAGCCGCCGTCTGGGGTTTGGTCTATTCGCAAGGGTACCAGGATGCCA
TGGACGACGGAAATGGCACGAATGACGGCCAATGTCATGGCTGGAGGTGC
TTTGGATTCTGGGCCGTGGGATGTACGGTAAGCGTTTGGATCGCCATTGG
GGCTTGGTTGATTGCGTGGAGGTATTGGAGACGACGAGGAGTTGTTGTTT
AATCTTGGAGCTGGTAGCATTACCGCATTCTCGCTCTACGGACCCCTGTT
GCTCACTCGTCTCCACTACACTCAACTCCGGGTCAATGCTGTCGCAATCG
CCGCGGAGGTCTCGATGTACTTACCTGTCCCGCTGTTTGGATATCTGTGT
GATCGGTACAGCCCATCTCCGCTGGCCTTATTCTCTGGTTTCGTGTTTGG
GGCTGGGTACCTTCTGGCTGCACTGGCCTTCAAGAGTGGACCACCTCCTG
ATGCAGGTGGCGACGGCTGGCCATTTTGGGTGATGATTGTGGCATTCATC
GCCATTGGCGTTGCTACCAGTTGCATGTACTTGGCTGCGGTCGCAACATG
TGCCAAAAATTTCGGCAGGGGTAAGCATAAGGGAATCATGCTTGCTGTTC
CTATCGCGGGTTTTGGCCTTAGTGGCATGTGGCAAAGCCAAGTAGGAACG
TACTTCCTATGTGACCGTCTTGAGGATGGTACGCGTGGGGATGTCAATGT
ATATAAGTACTTCTTGTTTCTCGCCATCCTGTTGTTCTGCGTTGGTGTAA
TTGGCACCTTTGCCCTCAGGATCGTGGATGAGAACGAAGACAAGTACATT
GACGAGGCGGTAGAGGAGTTGGAGCGCAGTGGCCTCCTTGAGGAGAGCGA
GTTCTTCCGGCCCAGGAACGACGACAGAACCGCATATGGAACGTTTTCGC
AGGCCGAGGACGGCACCGGATCCGATGGAGACCAAACTCTGACACTGTCA
GAAGAGGAGCGAGAAGCAGCAAGACTTGAGAAGGAAAGGGAAGAAGAAGA
ACGCCGGAAGAAGAACTGGCTGCTGAACTACGAGACGAGGATCTTCCTCC
AGGACAAGTCAATGTGGTGGCTTGCCATTGGCTTCTTCCTGGTCACTGGG
CCAGGAGAGGCATATATCAATAACATGACGCCATCCCGTGATAAGCCCGA
TTCAGCTATCGACAAGAGGGATTTTGATGCTCATCGCCCGTTACTCGATG
ATGCAGATGCTGAGGCGGATGAGCAACAACGAGGACACCTACGGTCACGG
CCACAGTCGTGTTTATCGGCCACCAACAATGACGATGGTCTCCTGAATGA
TGTTGTCGACGAGATCCTAGAAAGGGATAGAAAGAAGATGGCCAAGGAAG
TGGTGCGAGTTAGCAGTTTTGCGTGGGGAGTTATTAGCTGCTGGGCACTA
TTGTCCAATCCTTGACTCCTGTATCAAATATTACAAATGCCTCGTCACCT
GCAGGCTTACCATCAACCCATGTCAGCACCATCGCGCTGACCTCGACCAT
TGCCCGACTTCTCACCGGCTCGCTCTCCGACCTCTTCGCCCCTCCAGCAA
CTCATCTCTTCCCTGGTCCGAGTAGCCGCCCTGCCTCCATCACATCGGAT
ACCAATCGCACCACCTTCACCCGCCTTGCATTTCTCCTCCCCTCCGCCTT
CCTCCTCTCCATCGGCTATCTCCTTCTCTCCTCCCCGATTCTTCTCTACC
ACCCCGGATTCACCCACCTTACCACAGCCCTGATTGGTCTCGGCTACGGC
AGTGCCTTTTCTCTCGTCCCGATTATCATCTCTGTCGTCTGGGGAGTCGA
GAACTTTGCCACCAACTGGGGTATCGTTGCCATGGTTCCAGCCGCCGGAG
CCGCCGTCTGGGGTTTGGTCTATTCGCAAGGGTACCAGGATGCCATGGAC
GACGGAAATGGCACGAATGACGGCCAATGTCATGGCTGGAGGTGCTTTGG
ATTCTGGGCCGTGGGATGTACGGTAAGCGTTTGGATCGCCATTGGGGCTT
GGTTGATTGCGTGGAGGTATTGGAGACGACGAGGAGTTGTTGTTTAATCT
TGGAGCTGGTAGCATTACCGCATTCTCGCTCTACGGACCCCTGTTGCTCA
CTCGTCTCCACTACACTCAACTCCGGGTCAATGCTGTCGCAATCGCCGCG
GAGGTCTCGATGTACTTACCTGTCCCGCTGTTTGGATATCTGTGTGATCG
GTACAGCCCATCTCCGCTGGCCTTATTCTCTGGTTTCGTGTTTGGGGCTG
GGTACCTTCTGGCTGCACTGGCCTTCAAGAGTGGACCACCTCCTGATGCA
GGTGGCGACGGCTGGCCATTTTGGGTGATGATTGTGGCATTCATCGCCAT
TGGCGTTGCTACCAGTTGCATGTACTTGGCTGCGGTCGCAACATGTGCCA
AAAATTTCGGCAGGGGTAAGCATAAGGGAATCATGCTTGCTGTTCCTATC
GCGGGTTTTGGCCTTAGTGGCATGTGGCAAAGCCAAGTAGGAACGTACTT
CCTATGTGACCGTCTTGAGGATGGTACGCGTGGGGATGTCAATGTATATA
AGTACTTCTTGTTTCTCGCCATCCTGTTGTTCTGCGTTGGTGTAATTGGC
ACCTTTGCCCTCAGGATCGTGGATGAGAACGAAGACAAGTACATTGACGA
GGCGGTAGAGGAGTTGGAGCGCAGTGGCCTCCTTGAGGAGAGCGAGTTCT
TCCGGCCCAGGAACGACGACAGAACCGCATATGGAACGTTTTCGCAGGCC
GAGGACGGCACCGGATCCGATGGAGACCAAACTCTGACACTGTCAGAAGA
GGAGCGAGAAGCAGCAAGACTTGAGAAGGAAAGGGAAGAAGAAGAACGCC
GGAAGAAGAACTGGCTGCTGAACTACGAGACGAGGATCTTCCTCCAGGAC
AAGTCAATGTGGTGGCTTGCCATTGGCTTCTTCCTGGTCACTGGGCCAGG
AGAGGCATATATCAATAACATGACGCCATCCCGTGATAAGCCCGATTCAG
CTATCGACAAGAGGGATTTTGATGCTCATCGCCCGTTACTCGATGATGCA
GATGCTGAGGCGGATGAGCAACAACGAGGACACCTACGGTCACGGCCACA
GTCGTGTTTATCGGCCACCAACAATGACGATGGTCTCCTGAATGATGTTG
TCGACGAGATCCTAGAAAGGGATAGAAAGAAGATGGCCAAGGAAGTGGTG
CGAGTTAGCAGTTTTGCGTGGGGAGTTATTAGCTG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0022857 | transmembrane transporter activity |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0055085 | transmembrane transport |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_001167-T1.utr3p1 | KJC3_001167-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_001167-T1.utr5p1 | KJC3_001167-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036259 |
| DBxref | InterPro:IPR011701 |
| DBxref | PFAM:PF06813 |
| DBxref | PFAM:PF07690 |
| Product | Putative monocarboxylate transporter mch1 |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch1 | supercontig | ch1:2976307..2979142 - |
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