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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch1:3003327..3005860+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_001176-T1 ID=KJC3_001176-T1|Name=KJC3_001176-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2534bp|location=Sequence derived from alignment at ch1:3003327..3005860+ (Aspergillus niger KJC3)
CCCCAGTCGGAGAGTCTCTGTCGCTTTGATAGATGTCTCGCCTGGCTTAT
CCCCACCTGCCCTTGTCTCTCTCCCAGTCCATGCTGCGGCCCTATCGCCC
CTGGGCGTCGCATCATGGCGGCTGTCAACCGGAACATGTTTGAGGCCAGC
GTCACCACCGATCGCCCCCAGGGCGCTCCACTAATGATTCTACCACTCAA
CTTAATTGCGGTCATCGTCTCTTACGTTCGTCTAGCTACTGCTCTTATGA
ATGGAGCTCGTGCATCCCACTAACCACCTCATGCCTTTTTGCAGGTAGAT
GATCCCGGCGATCTCGCCCGTCTCTGTCGAGCATGCCGCGTTCTCAACTA
CATGGCCCTCCCCCAGCTCTACAAACACATCACCTTGACCTCCTATGACA
AAATTCGATATCGCGACGATGAGCCCGAGGGCATGGGTAGCGCCAGTCCT
TTTTCCATGGGACTGAATGCCATTATCACCCGTCCCTATGCCACACTCGT
TCGGTCGCTTACTCTTCGAGGCAACTGGCGGGAGCTCGAGCTCGAGGAGC
ATGCGCGCGTGGGCCGCGTGCCGGACTCGTCGATGATGCTGAACATTGCG
GTGCGCGCGGCGGTCGATCGGATGACGGAATTGGAAAGCTTTAGCTGGGA
ACTCAATACCAAGATGCTGGAAACTGTCTATCTCGGGCTGGCGCAGCTGC
CTAAGCTGACGGCCTTGACCATTCGGTTTCCCTCGAGTCGACATCCCCGC
CCAACCATCGTCATTCCACCCATGCCACATCTTCGATATCTGAAGGTTAC
CGACATCGATCCGCTTTGCTATCCGGATGACATCTCGACTCTGGTGTTTC
GGTGTCGCAAGTTGCGCGAGCTCAACTTACATTGGTCTCCGCGCATGCGC
AATGCGCAGGAGCCTAGTGTCATGGTTCACGACTACTTTCGCAAGTGCAT
CGCCGCGAAACAACCCCTTTCAATCAAGAAGATTGGCCTGCAGAACCTAT
ACGCTTTGCACACGGAGGATTTCGGTCTCGGGGTGGATAGTGCCACTGTA
GAAGACGTGACCATCCTCCAGCATGGCGGTGCGGATCTTTCAATGAACAC
TTTTGTGGATAGCACTTGGCCCACAACGCCAGCTCATCCCATTCGTATCA
AAGCAATCCGACAGGATGCCGTGAGCAAGAAACATGCGCAGTTTCTTAAC
CAGTTTACCGGTCTGGAACGGTTATACTTTGTCAATGCCACTCTTAATCC
CAACGACGATATCAACTCCCCTCGACCTTTGACCTCTTCTGCCGCACTCT
CTCCCCCTTCGTCTGACACCTCTCAACCCGCTACTAATGGTACATCCACC
AGCTGCTCTGCCGCTGCAAGCAACTCCCCCAGTTTGCAAGCAAGCATCCG
AGACCTATACCTGAACAACATCACTATGAATCATGCTGCCACCTTACGAC
ATCTCTTACTCCCCGCTCGCTGGCCCCTGTCTGCACCGACGGTCGCGCGC
CTCGTCCACGCCAGTCCGCAATTGGAGCAGCTGGGCTTCGCCACAGAATT
CTCCGACCTGGAAGCATTGGGGCTTCTTCTTCCATTCCTCCGAAATCTCA
AGGCGTTGCGTCTTCTCATTCCCACCTGCCCCTCACCGTCCGAGACAGCT
CGTGCTGGGCCGCTCCCTAAGACGTTCAAATACTTCTCTCCATCTGCTAA
TGCGCTCACCTCCGCCCGGACGCTCTCCGACCTTGTGGAAGCTGACGACG
ACACCTTAATCGCGAGGCTCAGCGAGTCCCTTGCAGACCAGCAAGTCTTC
CACCGGCTGAAGGTCATTGGTCTGGGCCGCAAAGGCTTCCAACTAGGAGA
CTACTACACCGTGCCAGCCGAGCAGGCCGAGAATTATGGACACGTCCAGC
TACAAACGCCCACGGGCTCCCGGGCTACCAGCGCAGAAGCCAACGTAGGC
TACGATAAGAGTCCACCAGCCGGGGGACCCTCCCCGACAGCCAATGGCCA
TAACGCAATGGTGCCCTCGCAGAGAAATGGACACCTCCCCCCTTCAGTAC
TGGGTAAGCGGGCACGAGAAGAGGACACCCCTACTACAGAATCAGGAGAA
GCCAACCAGCCGGCAGACGAGCAAACACCCGACCCAAGTTTGAATCCCTG
CGTTCCGCAAATCCTTCGCGATGGTCGATACTGGCGACGGCGCGTTCGAC
GCGTTGGCTGGGATGTGCTGCAACATTGGGAGATATGGGGACTGGACAAA
CAGGAGTTATGAATTTGGCGTACGGTGTCGATAAAACAATACCCTGGGAA
TCTTCTCGATTCTTCTTATTTCATGAACAATATTTGGCTTTAATTGGGTG
ACCTACGGCAATCGTCGGGGTTTCCTGTCGGGATTATATATAGCATGCAT
TGTGTGCCCCCTTCTAGCCTCTTGACCATGGGGGTTAGGATGAGCATCAA
CTCGAGCAGATACTCGGTTAGTAGATAGTATATTATTATACCTTACCTTA
CCATACCATAGCAATATGAGCAATGACAACCTCC back to topCoding sequence (CDS) from alignment at ch1:3003327..3005860+ >KJC3_001176-T1 ID=KJC3_001176-T1|Name=KJC3_001176-T1|organism=Aspergillus niger KJC3|type=CDS|length=4158bp|location=Sequence derived from alignment at ch1:3003327..3005860+ (Aspergillus niger KJC3)
ATGGCGGCTGTCAACCGGAACATGTTTGAGGCCAGCGTCACCACCGATCG
CCCCCAGGGCGCTCCACTAATGATTCTACCACTCAACTTAATTGCGGTCA
TCGTCTCTTACGTAGATGATCCCGGCGATCTCGCCCGTCTCTGTCGAGCA
TGCCGCGTTCTCAACTACATGGCCCTCCCCCAGCTCTACAAACACATCAC
CTTGACCTCCTATGACAAAATTCGATATCGCGACGATGAGCCCGAGGGCA
TGGGTAGCGCCAGTCCTTTTTCCATGGGACTGAATGCCATTATCACCCGT
CCCTATGCCACACTCGTTCGGTCGCTTACTCTTCGAGGCAACTGGCGGGA
GCTCGAGCTCGAGGAGCATGCGCGCGTGGGCCGCGTGCCGGACTCGTCGA
TGATGCTGAACATTGCGGTGCGCGCGGCGGTCGATCGGATGACGGAATTG
GAAAGCTTTAGCTGGGAACTCAATACCAAGATGCTGGAAACTGTCTATCT
CGGGCTGGCGCAGCTGCCTAAGCTGACGGCCTTGACCATTCGGTTTCCCT
CGAGTCGACATCCCCGCCCAACCATCGTCATTCCACCCATGCCACATCTT
CGATATCTGAAGGTTACCGACATCGATCCGCTTTGCTATCCGGATGACAT
CTCGACTCTGGTGTTTCGGTGTCGCAAGTTGCGCGAGCTCAACTTACATT
GGTCTCCGCGCATGCGCAATGCGCAGGAGCCTAGTGTCATGGTTCACGAC
TACTTTCGCAAGTGCATCGCCGCGAAACAACCCCTTTCAATCAAGAAGAT
TGGCCTGCAGAACCTATACGCTTTGCACACGGAGGATTTCGGTCTCGGGG
TGGATAGTGCCACTGTAGAAGACGTGACCATCCTCCAGCATGGCGGTGCG
GATCTTTCAATGAACACTTTTGTGGATAGCACTTGGCCCACAACGCCAGC
TCATCCCATTCGTATCAAAGCAATCCGACAGGATGCCGTGAGCAAGAAAC
ATGCGCAGTTTCTTAACCAGTTTACCGGTCTGGAACGGTTATACTTTGTC
AATGCCACTCTTAATCCCAACGACGATATCAACTCCCCTCGACCTTTGAC
CTCTTCTGCCGCACTCTCTCCCCCTTCGTCTGACACCTCTCAACCCGCTA
CTAATGGTACATCCACCAGCTGCTCTGCCGCTGCAAGCAACTCCCCCAGT
TTGCAAGCAAGCATCCGAGACCTATACCTGAACAACATCACTATGAATCA
TGCTGCCACCTTACGACATCTCTTACTCCCCGCTCGCTGGCCCCTGTCTG
CACCGACGGTCGCGCGCCTCGTCCACGCCAGTCCGCAATTGGAGCAGCTG
GGCTTCGCCACAGAATTCTCCGACCTGGAAGCATTGGGGCTTCTTCTTCC
ATTCCTCCGAAATCTCAAGGCGTTGCGTCTTCTCATTCCCACCTGCCCCT
CACCGTCCGAGACAGCTCGTGCTGGGCCGCTCCCTAAGACGTTCAAATAC
TTCTCTCCATCTGCTAATGCGCTCACCTCCGCCCGGACGCTCTCCGACCT
TGTGGAAGCTGACGACGACACCTTAATCGCGAGGCTCAGCGAGTCCCTTG
CAGACCAGCAAGTCTTCCACCGGCTGAAGGTCATTGGTCTGGGCCGCAAA
GGCTTCCAACTAGGAGACTACTACACCGTGCCAGCCGAGCAGGCCGAGAA
TTATGGACACGTCCAGCTACAAACGCCCACGGGCTCCCGGGCTACCAGCG
CAGAAGCCAACGTAGGCTACGATAAGAGTCCACCAGCCGGGGGACCCTCC
CCGACAGCCAATGGCCATAACGCAATGGTGCCCTCGCAGAGAAATGGACA
CCTCCCCCCTTCAGTACTGGGTAAGCGGGCACGAGAAGAGGACACCCCTA
CTACAGAATCAGGAGAAGCCAACCAGCCGGCAGACGAGCAAACACCCGAC
CCAAGTTTGAATCCCTGCGTTCCGCAAATCCTTCGCGATGGTCGATACTG
GCGACGGCGCGTTCGACGCGTTGGCTGGGATGTGCTGCAACATTGGGAGA
TATGGGGACTGGACAAACAGGAGTTATGAATGGCGGCTGTCAACCGGAAC
ATGTTTGAGGCCAGCGTCACCACCGATCGCCCCCAGGGCGCTCCACTAAT
GATTCTACCACTCAACTTAATTGCGGTCATCGTCTCTTACGTAGATGATC
CCGGCGATCTCGCCCGTCTCTGTCGAGCATGCCGCGTTCTCAACTACATG
GCCCTCCCCCAGCTCTACAAACACATCACCTTGACCTCCTATGACAAAAT
TCGATATCGCGACGATGAGCCCGAGGGCATGGGTAGCGCCAGTCCTTTTT
CCATGGGACTGAATGCCATTATCACCCGTCCCTATGCCACACTCGTTCGG
TCGCTTACTCTTCGAGGCAACTGGCGGGAGCTCGAGCTCGAGGAGCATGC
GCGCGTGGGCCGCGTGCCGGACTCGTCGATGATGCTGAACATTGCGGTGC
GCGCGGCGGTCGATCGGATGACGGAATTGGAAAGCTTTAGCTGGGAACTC
AATACCAAGATGCTGGAAACTGTCTATCTCGGGCTGGCGCAGCTGCCTAA
GCTGACGGCCTTGACCATTCGGTTTCCCTCGAGTCGACATCCCCGCCCAA
CCATCGTCATTCCACCCATGCCACATCTTCGATATCTGAAGGTTACCGAC
ATCGATCCGCTTTGCTATCCGGATGACATCTCGACTCTGGTGTTTCGGTG
TCGCAAGTTGCGCGAGCTCAACTTACATTGGTCTCCGCGCATGCGCAATG
CGCAGGAGCCTAGTGTCATGGTTCACGACTACTTTCGCAAGTGCATCGCC
GCGAAACAACCCCTTTCAATCAAGAAGATTGGCCTGCAGAACCTATACGC
TTTGCACACGGAGGATTTCGGTCTCGGGGTGGATAGTGCCACTGTAGAAG
ACGTGACCATCCTCCAGCATGGCGGTGCGGATCTTTCAATGAACACTTTT
GTGGATAGCACTTGGCCCACAACGCCAGCTCATCCCATTCGTATCAAAGC
AATCCGACAGGATGCCGTGAGCAAGAAACATGCGCAGTTTCTTAACCAGT
TTACCGGTCTGGAACGGTTATACTTTGTCAATGCCACTCTTAATCCCAAC
GACGATATCAACTCCCCTCGACCTTTGACCTCTTCTGCCGCACTCTCTCC
CCCTTCGTCTGACACCTCTCAACCCGCTACTAATGGTACATCCACCAGCT
GCTCTGCCGCTGCAAGCAACTCCCCCAGTTTGCAAGCAAGCATCCGAGAC
CTATACCTGAACAACATCACTATGAATCATGCTGCCACCTTACGACATCT
CTTACTCCCCGCTCGCTGGCCCCTGTCTGCACCGACGGTCGCGCGCCTCG
TCCACGCCAGTCCGCAATTGGAGCAGCTGGGCTTCGCCACAGAATTCTCC
GACCTGGAAGCATTGGGGCTTCTTCTTCCATTCCTCCGAAATCTCAAGGC
GTTGCGTCTTCTCATTCCCACCTGCCCCTCACCGTCCGAGACAGCTCGTG
CTGGGCCGCTCCCTAAGACGTTCAAATACTTCTCTCCATCTGCTAATGCG
CTCACCTCCGCCCGGACGCTCTCCGACCTTGTGGAAGCTGACGACGACAC
CTTAATCGCGAGGCTCAGCGAGTCCCTTGCAGACCAGCAAGTCTTCCACC
GGCTGAAGGTCATTGGTCTGGGCCGCAAAGGCTTCCAACTAGGAGACTAC
TACACCGTGCCAGCCGAGCAGGCCGAGAATTATGGACACGTCCAGCTACA
AACGCCCACGGGCTCCCGGGCTACCAGCGCAGAAGCCAACGTAGGCTACG
ATAAGAGTCCACCAGCCGGGGGACCCTCCCCGACAGCCAATGGCCATAAC
GCAATGGTGCCCTCGCAGAGAAATGGACACCTCCCCCCTTCAGTACTGGG
TAAGCGGGCACGAGAAGAGGACACCCCTACTACAGAATCAGGAGAAGCCA
ACCAGCCGGCAGACGAGCAAACACCCGACCCAAGTTTGAATCCCTGCGTT
CCGCAAATCCTTCGCGATGGTCGATACTGGCGACGGCGCGTTCGACGCGT
TGGCTGGGATGTGCTGCAACATTGGGAGATATGGGGACTGGACAAACAGG
AGTTATGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005515 | protein binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_001176-T1.utr5p1 | KJC3_001176-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_001176-T1.utr3p1 | KJC3_001176-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036047 |
| DBxref | InterPro:IPR032675 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch1 | supercontig | ch1:3003327..3005860 + |
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