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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch1:3022976..3024091- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_001184-T1 ID=KJC3_001184-T1|Name=KJC3_001184-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1116bp|location=Sequence derived from alignment at ch1:3022976..3024091- (Aspergillus niger KJC3)
ATGACGACCTACCAATTCCACGACGTCACCAAATCCGTCACCGACATCGA
CAGACGCAAATGTCGTCGTGAAGTACCGATGCAAGTCCTGGCACTTGGAC
TCTGTCGGACAGGAACAGACTGTAAGGCGTGCGTCAGCTTGAAAGATGCC
TTGCACCCCCGCTAACAAGAGATAAAGCATTGAGACAAGCTCTCCGAGCC
CTAGGGTACAATGATACCTATCACGGATACGCAGCAGTCCTGGAGAACCC
CCGAGATTGTGAGATGTGGCATGCTGCGCTGAGCGCCAAGTATGAGGGGA
AGGGACGACCATTTGGTCGAGAAGAATTCGATCAGATATTGGGGCATTGT
CAGGTACGGACGGTCCCTTTCCCTTTCAACCAGTGATTACCAGATGAGAG
AGAGAAAGAGAGAGTCATATATACTAACAGTCAGATAAATTGATCACTAC
CATAGGCTGTATCCGACTTCCCCGCAGCCTGTTTCGCGGACGAATTAATC
CAAGCCTACCCCGAGGCCAAAGTAATCCTGACAGTCCGAGACGTCGACGA
TTGGCATCGGTGAGTTTCAATACCCCCCTTTTTTTCTTTCATCCCAGTCA
TGCAACACACTCTTCTCATGCCAAATCTACAGATCCGTCAGTAAATCATT
CACGCCCCTCCTCACACACCCTCTTCTCCCCCTCTCCACCATCCTCGAGA
CCCTCCTCCTCTCCCGAACACGCTGGATCCGCCCAACCTGGCAAAAGATA
TGGAAATACTACTTCAACGACGACTTCGACGCCAACGGCCGTAAAGCCTT
CGAGGCGCATAATAGTCATGTGAAAGATATTGTGCCAGCTGAGAACTTGC
TCGTCTATAATGTCAAGGATGGGTGGGAGCCGCTGTGTGAGTTTCTGGGG
AAGACGGTTCCCTTGGATGGGAAGGGTGATGTGGTGCCTTTTCCGAGGGG
GAATGATCCGGGGATCTTTCGAAATAGGTTTCGGGATGCTATTTGGTATA
ACTTTTTGGAGTTGGGGGAGAGGGTGCTTAAGGTTGTTGTTGTTCTGTAT
TTTGGATATTTGTGGGTGGGGGGGATCTGGGGATGGGTTCATGCTAATAT
GTCGAGCTTGGTTTGA back to topCoding sequence (CDS) from alignment at ch1:3022976..3024091- >KJC3_001184-T1 ID=KJC3_001184-T1|Name=KJC3_001184-T1|organism=Aspergillus niger KJC3|type=CDS|length=3540bp|location=Sequence derived from alignment at ch1:3022976..3024091- (Aspergillus niger KJC3)
ATCCGTCAGTAAATCATTCACGCCCCTCCTCACACACCCTCTTCTCCCCC
TCTCCACCATCCTCGAGACCCTCCTCCTCTCCCGAACACGCTGGATCCGC
CCAACCTGGCAAAAGATATGGAAATACTACTTCAACGACGACTTCGACGC
CAACGGCCGTAAAGCCTTCGAGGCGCATAATAGTCATGTGAAAGATATTG
TGCCAGCTGAGAACTTGCTCGTCTATAATGTCAAGGATGGGTGGGAGCCG
CTGTGTGAGTTTCTGGGGAAGACGGTTCCCTTGGATGGGAAGGGTGATGT
GGTGCCTTTTCCGAGGGGGAATGATCCGGGGATCTTTCGAAATAGGTTTC
GGGATGCTATTTGGTATAACTTTTTGGAGTTGGGGGAGAGGGTGCTTAAG
GTTGTTGTTGTTCTGTATTTTGGATATTTGTGGGTGGGGGGGATCTGGGG
ATGGGTTCATGCTAATATGTCGAGCTTGGTTTGAGCTGTATCCGACTTCC
CCGCAGCCTGTTTCGCGGACGAATTAATCCAAGCCTACCCCGAGGCCAAA
GTAATCCTGACAGTCCGAGACGTCGACGATTGGCATCGCATTGAGACAAG
CTCTCCGAGCCCTAGGGTACAATGATACCTATCACGGATACGCAGCAGTC
CTGGAGAACCCCCGAGATTGTGAGATGTGGCATGCTGCGCTGAGCGCCAA
GTATGAGGGGAAGGGACGACCATTTGGTCGAGAAGAATTCGATCAGATAT
TGGGGCATTGTCAGATGACGACCTACCAATTCCACGACGTCACCAAATCC
GTCACCGACATCGACAGACGCAAATGTCGTCGTGAAGTACCGATGCAAGT
CCTGGCACTTGGACTCTGTCGGACAGGAACAGACTATCCGTCAGTAAATC
ATTCACGCCCCTCCTCACACACCCTCTTCTCCCCCTCTCCACCATCCTCG
AGACCCTCCTCCTCTCCCGAACACGCTGGATCCGCCCAACCTGGCAAAAG
ATATGGAAATACTACTTCAACGACGACTTCGACGCCAACGGCCGTAAAGC
CTTCGAGGCGCATAATAGTCATGTGAAAGATATTGTGCCAGCTGAGAACT
TGCTCGTCTATAATGTCAAGGATGGGTGGGAGCCGCTGTGTGAGTTTCTG
GGGAAGACGGTTCCCTTGGATGGGAAGGGTGATGTGGTGCCTTTTCCGAG
GGGGAATGATCCGGGGATCTTTCGAAATAGGTTTCGGGATGCTATTTGGT
ATAACTTTTTGGAGTTGGGGGAGAGGGTGCTTAAGGTTGTTGTTGTTCTG
TATTTTGGATATTTGTGGGTGGGGGGGATCTGGGGATGGGTTCATGCTAA
TATGTCGAGCTTGGTTTGAGCTGTATCCGACTTCCCCGCAGCCTGTTTCG
CGGACGAATTAATCCAAGCCTACCCCGAGGCCAAAGTAATCCTGACAGTC
CGAGACGTCGACGATTGGCATCGCATTGAGACAAGCTCTCCGAGCCCTAG
GGTACAATGATACCTATCACGGATACGCAGCAGTCCTGGAGAACCCCCGA
GATTGTGAGATGTGGCATGCTGCGCTGAGCGCCAAGTATGAGGGGAAGGG
ACGACCATTTGGTCGAGAAGAATTCGATCAGATATTGGGGCATTGTCAGA
TGACGACCTACCAATTCCACGACGTCACCAAATCCGTCACCGACATCGAC
AGACGCAAATGTCGTCGTGAAGTACCGATGCAAGTCCTGGCACTTGGACT
CTGTCGGACAGGAACAGACTATCCGTCAGTAAATCATTCACGCCCCTCCT
CACACACCCTCTTCTCCCCCTCTCCACCATCCTCGAGACCCTCCTCCTCT
CCCGAACACGCTGGATCCGCCCAACCTGGCAAAAGATATGGAAATACTAC
TTCAACGACGACTTCGACGCCAACGGCCGTAAAGCCTTCGAGGCGCATAA
TAGTCATGTGAAAGATATTGTGCCAGCTGAGAACTTGCTCGTCTATAATG
TCAAGGATGGGTGGGAGCCGCTGTGTGAGTTTCTGGGGAAGACGGTTCCC
TTGGATGGGAAGGGTGATGTGGTGCCTTTTCCGAGGGGGAATGATCCGGG
GATCTTTCGAAATAGGTTTCGGGATGCTATTTGGTATAACTTTTTGGAGT
TGGGGGAGAGGGTGCTTAAGGTTGTTGTTGTTCTGTATTTTGGATATTTG
TGGGTGGGGGGGATCTGGGGATGGGTTCATGCTAATATGTCGAGCTTGGT
TTGAGCTGTATCCGACTTCCCCGCAGCCTGTTTCGCGGACGAATTAATCC
AAGCCTACCCCGAGGCCAAAGTAATCCTGACAGTCCGAGACGTCGACGAT
TGGCATCGCATTGAGACAAGCTCTCCGAGCCCTAGGGTACAATGATACCT
ATCACGGATACGCAGCAGTCCTGGAGAACCCCCGAGATTGTGAGATGTGG
CATGCTGCGCTGAGCGCCAAGTATGAGGGGAAGGGACGACCATTTGGTCG
AGAAGAATTCGATCAGATATTGGGGCATTGTCAGATGACGACCTACCAAT
TCCACGACGTCACCAAATCCGTCACCGACATCGACAGACGCAAATGTCGT
CGTGAAGTACCGATGCAAGTCCTGGCACTTGGACTCTGTCGGACAGGAAC
AGACTATCCGTCAGTAAATCATTCACGCCCCTCCTCACACACCCTCTTCT
CCCCCTCTCCACCATCCTCGAGACCCTCCTCCTCTCCCGAACACGCTGGA
TCCGCCCAACCTGGCAAAAGATATGGAAATACTACTTCAACGACGACTTC
GACGCCAACGGCCGTAAAGCCTTCGAGGCGCATAATAGTCATGTGAAAGA
TATTGTGCCAGCTGAGAACTTGCTCGTCTATAATGTCAAGGATGGGTGGG
AGCCGCTGTGTGAGTTTCTGGGGAAGACGGTTCCCTTGGATGGGAAGGGT
GATGTGGTGCCTTTTCCGAGGGGGAATGATCCGGGGATCTTTCGAAATAG
GTTTCGGGATGCTATTTGGTATAACTTTTTGGAGTTGGGGGAGAGGGTGC
TTAAGGTTGTTGTTGTTCTGTATTTTGGATATTTGTGGGTGGGGGGGATC
TGGGGATGGGTTCATGCTAATATGTCGAGCTTGGTTTGAGCTGTATCCGA
CTTCCCCGCAGCCTGTTTCGCGGACGAATTAATCCAAGCCTACCCCGAGG
CCAAAGTAATCCTGACAGTCCGAGACGTCGACGATTGGCATCGCATTGAG
ACAAGCTCTCCGAGCCCTAGGGTACAATGATACCTATCACGGATACGCAG
CAGTCCTGGAGAACCCCCGAGATTGTGAGATGTGGCATGCTGCGCTGAGC
GCCAAGTATGAGGGGAAGGGACGACCATTTGGTCGAGAAGAATTCGATCA
GATATTGGGGCATTGTCAGATGACGACCTACCAATTCCACGACGTCACCA
AATCCGTCACCGACATCGACAGACGCAAATGTCGTCGTGAAGTACCGATG
CAAGTCCTGGCACTTGGACTCTGTCGGACAGGAACAGACT back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR027417 |
| DBxref | InterPro:IPR040632 |
| DBxref | PFAM:PF17784 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch1 | supercontig | ch1:3022976..3024091 - |
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