You are here

KJC3_001197-T1, KJC3_001197-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_001197-T1
Unique NameKJC3_001197-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch1:3066586..3068291-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_001197-T1 ID=KJC3_001197-T1|Name=KJC3_001197-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1706bp|location=Sequence derived from alignment at ch1:3066586..3068291- (Aspergillus niger KJC3)
CTTCTCGATCGATCTTCTGGATTATTCTTCTGCATGCCGAGCCCGTAGGT ACTGGGCTGTTTTGTGCTGGATGGGTCTCACTATTGAGGCTGCTTGATCT ACCCCGTTGCTTCCGCACCACCCTGACAATGCTCGATTTCATGGATTACA TCCAACTCGCCTTCGCCGAGGCGACGAATTGGAACCGCGACAATTCATAC TCGTCGCTGACAGCCACTGCGCAGTGTATGTAGCCCGTACCTTCTTTACT CTCAACCTCCATCCAAACTCTACTAATCACAAGCACAGCCCTCCTCGACT TCTCCACTCCCGAACGTCTGCGCGTCCATCTCTCCTCCCTATCCACTCCG CACTTCGCAACAAGTTACACCCTCGGCACCGTCGGCCTCATCGATGGCTC AGTCTCCTACCTCTTTAGCACTGTCCCTCTCGATAAATTCCCCAGCCGAA GTGCCCTGATCCCCCTCCGCAAGCTCTCCCCGGGCTACCGTCAAGTGCAA GCACCCATCGCACCCATCGCAGAAACAATCCTCATCAACGATGACCTCAA CGATGCCTCCGCATACACCACCATCGGCAAGAAGGCGACCCTCTTCCACG CAACCCTACATCTCCCACCCCCGACAACCCTAAACGCCCTCTTCCTACGC CGTATCTCCCCAACCATGCAACTCTCCCTAGCAGTCTGCTCAACCCGAGG CCCGCCGCTCTCCAAATCCGCCCCGCAAGCCTCTCTCCTCGCCCAACTCT CCCACAACACGGGCAAATACAACAACGAGTACCTCTTCAGCACGGATAAT GCCCTCTTCGGCTGGCGTGGACTGTGGAACTTCGGCCCGGATCCCCGCGA CCCTGTTGCTTCGGGCTCTTCTCCCAGGTTATCGTTGCTCTCTGCTGGCG CGGAGGCTTACTATTCTCCTGTTTCGTCGCTGATTGGCATGTCAACGGGA CTGAGATTTAGCACGTTGCCTGCTGCTACAGATGTTCCTTTATCAAACTC ATCACCAACGGCTAGTACCAGCAGTGCTAATGCCAACACCCCCATCTCTA CCTTCCCCTACACCCTCACTCTTACTTTGACACCGTTAACGGGGTCCCTC TCAACTACGTACTCCCTCCGCGCATCCCCGAACCTAGCATTTAGCTCCCG CTTCGGGTTTAACGTCTATAGCTGGGAAAGTGAGATGGTAGCGGGGTGCG AACTCTGGCGGAAGAGTAAGTCCCGCTATCGTGATGATGGTGATGGTGTG GAATGGGCGCGACGGAAGATACGCGAGAGCTTGTTTCCTCATCCGCATCC TCATCTATCTACCTCCACGCCTAATGATATTAAAGATCTAGCGGGCCATG CATTAGAGAAGAGTGGGAAAGGAGAAGAGGAGGAGAACGAATCCGTGTTG AAAATTAGGGTGGATCAGTCGTGGAATGTGCGGTTGTTGTGGGAAGGTCG GGTCAAGGAGTTGTTGGTGAGTGCTGGGGTGGGGTTGGGGCCGAGTTCGT TTTCCTCGTCGTATGTTTCTGATGGGGGTGGAGAGTCCGGGGGGCTGAGG AAGTCGTACTGGAGGGGAGTGGGGATCTCGGTGTCGTATTCGTCGTGATC CTTGTGTATATTATTGACCTATATGATTGGCTCTATGAGAGGAGAGAGAG AGAGCGGGGGAATATGTAGATACTATGATACGTGCTATGATAATACTGCA ACTTAC
back to top

Coding sequence (CDS) from alignment at ch1:3066586..3068291-

>KJC3_001197-T1 ID=KJC3_001197-T1|Name=KJC3_001197-T1|organism=Aspergillus niger KJC3|type=CDS|length=2814bp|location=Sequence derived from alignment at ch1:3066586..3068291- (Aspergillus niger KJC3)
CCCTCCTCGACTTCTCCACTCCCGAACGTCTGCGCGTCCATCTCTCCTCC
CTATCCACTCCGCACTTCGCAACAAGTTACACCCTCGGCACCGTCGGCCT
CATCGATGGCTCAGTCTCCTACCTCTTTAGCACTGTCCCTCTCGATAAAT
TCCCCAGCCGAAGTGCCCTGATCCCCCTCCGCAAGCTCTCCCCGGGCTAC
CGTCAAGTGCAAGCACCCATCGCACCCATCGCAGAAACAATCCTCATCAA
CGATGACCTCAACGATGCCTCCGCATACACCACCATCGGCAAGAAGGCGA
CCCTCTTCCACGCAACCCTACATCTCCCACCCCCGACAACCCTAAACGCC
CTCTTCCTACGCCGTATCTCCCCAACCATGCAACTCTCCCTAGCAGTCTG
CTCAACCCGAGGCCCGCCGCTCTCCAAATCCGCCCCGCAAGCCTCTCTCC
TCGCCCAACTCTCCCACAACACGGGCAAATACAACAACGAGTACCTCTTC
AGCACGGATAATGCCCTCTTCGGCTGGCGTGGACTGTGGAACTTCGGCCC
GGATCCCCGCGACCCTGTTGCTTCGGGCTCTTCTCCCAGGTTATCGTTGC
TCTCTGCTGGCGCGGAGGCTTACTATTCTCCTGTTTCGTCGCTGATTGGC
ATGTCAACGGGACTGAGATTTAGCACGTTGCCTGCTGCTACAGATGTTCC
TTTATCAAACTCATCACCAACGGCTAGTACCAGCAGTGCTAATGCCAACA
CCCCCATCTCTACCTTCCCCTACACCCTCACTCTTACTTTGACACCGTTA
ACGGGGTCCCTCTCAACTACGTACTCCCTCCGCGCATCCCCGAACCTAGC
ATTTAGCTCCCGCTTCGGGTTTAACGTCTATAGCTGGGAAAGTGAGATGG
TAGCGGGGTGCGAACTCTGGCGGAAGAGTAAGTCCCGCTATCGTGATGAT
GGTGATGGTGTGGAATGGGCGCGACGGAAGATACGCGAGAGCTTGTTTCC
TCATCCGCATCCTCATCTATCTACCTCCACGCCTAATGATATTAAAGATC
TAGCGGGCCATGCATTAGAGAAGAGTGGGAAAGGAGAAGAGGAGGAGAAC
GAATCCGTGTTGAAAATTAGGGTGGATCAGTCGTGGAATGTGCGGTTGTT
GTGGGAAGGTCGGGTCAAGGAGTTGTTGGTGAGTGCTGGGGTGGGGTTGG
GGCCGAGTTCGTTTTCCTCGTCGTATGTTTCTGATGGGGGTGGAGAGTCC
GGGGGGCTGAGGAAGTCGTACTGGAGGGGAGTGGGGATCTCGGTGTCGTA
TTCGTCGTGAATGCTCGATTTCATGGATTACATCCAACTCGCCTTCGCCG
AGGCGACGAATTGGAACCGCGACAATTCATACTCGTCGCTGACAGCCACT
GCGCAGTCCCTCCTCGACTTCTCCACTCCCGAACGTCTGCGCGTCCATCT
CTCCTCCCTATCCACTCCGCACTTCGCAACAAGTTACACCCTCGGCACCG
TCGGCCTCATCGATGGCTCAGTCTCCTACCTCTTTAGCACTGTCCCTCTC
GATAAATTCCCCAGCCGAAGTGCCCTGATCCCCCTCCGCAAGCTCTCCCC
GGGCTACCGTCAAGTGCAAGCACCCATCGCACCCATCGCAGAAACAATCC
TCATCAACGATGACCTCAACGATGCCTCCGCATACACCACCATCGGCAAG
AAGGCGACCCTCTTCCACGCAACCCTACATCTCCCACCCCCGACAACCCT
AAACGCCCTCTTCCTACGCCGTATCTCCCCAACCATGCAACTCTCCCTAG
CAGTCTGCTCAACCCGAGGCCCGCCGCTCTCCAAATCCGCCCCGCAAGCC
TCTCTCCTCGCCCAACTCTCCCACAACACGGGCAAATACAACAACGAGTA
CCTCTTCAGCACGGATAATGCCCTCTTCGGCTGGCGTGGACTGTGGAACT
TCGGCCCGGATCCCCGCGACCCTGTTGCTTCGGGCTCTTCTCCCAGGTTA
TCGTTGCTCTCTGCTGGCGCGGAGGCTTACTATTCTCCTGTTTCGTCGCT
GATTGGCATGTCAACGGGACTGAGATTTAGCACGTTGCCTGCTGCTACAG
ATGTTCCTTTATCAAACTCATCACCAACGGCTAGTACCAGCAGTGCTAAT
GCCAACACCCCCATCTCTACCTTCCCCTACACCCTCACTCTTACTTTGAC
ACCGTTAACGGGGTCCCTCTCAACTACGTACTCCCTCCGCGCATCCCCGA
ACCTAGCATTTAGCTCCCGCTTCGGGTTTAACGTCTATAGCTGGGAAAGT
GAGATGGTAGCGGGGTGCGAACTCTGGCGGAAGAGTAAGTCCCGCTATCG
TGATGATGGTGATGGTGTGGAATGGGCGCGACGGAAGATACGCGAGAGCT
TGTTTCCTCATCCGCATCCTCATCTATCTACCTCCACGCCTAATGATATT
AAAGATCTAGCGGGCCATGCATTAGAGAAGAGTGGGAAAGGAGAAGAGGA
GGAGAACGAATCCGTGTTGAAAATTAGGGTGGATCAGTCGTGGAATGTGC
GGTTGTTGTGGGAAGGTCGGGTCAAGGAGTTGTTGGTGAGTGCTGGGGTG
GGGTTGGGGCCGAGTTCGTTTTCCTCGTCGTATGTTTCTGATGGGGGTGG
AGAGTCCGGGGGGCTGAGGAAGTCGTACTGGAGGGGAGTGGGGATCTCGG
TGTCGTATTCGTCGTGAATGCTCGATTTCATGGATTACATCCAACTCGCC
TTCGCCGAGGCGACGAATTGGAACCGCGACAATTCATACTCGTCGCTGAC
AGCCACTGCGCAGT
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0032865ERMES complex
Vocabulary: Biological Process
TermDefinition
GO:0007005mitochondrion organization
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_001197KJC3_001197Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001197-T1KJC3_001197-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001197-T1.cdsKJC3_001197-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001197-T1.utr3p1KJC3_001197-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001197-T1.exon2KJC3_001197-T1.exon2Aspergillus niger KJC3exon
KJC3_001197-T1.exon1KJC3_001197-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001197-T1.utr5p1KJC3_001197-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
NoteantiSMASH:Cluster_1.14
NoteantiSMASH:Cluster_1.13
NoteBUSCO:EOG09262TUR
DBxrefInterPro:IPR027539
DBxrefPFAM:PF12519
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch1supercontigch1:3066586..3068291 -