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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch1:3066586..3068291- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_001197-T1 ID=KJC3_001197-T1|Name=KJC3_001197-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1706bp|location=Sequence derived from alignment at ch1:3066586..3068291- (Aspergillus niger KJC3) CTTCTCGATCGATCTTCTGGATTATTCTTCTGCATGCCGAGCCCGTAGGT
ACTGGGCTGTTTTGTGCTGGATGGGTCTCACTATTGAGGCTGCTTGATCT
ACCCCGTTGCTTCCGCACCACCCTGACAATGCTCGATTTCATGGATTACA
TCCAACTCGCCTTCGCCGAGGCGACGAATTGGAACCGCGACAATTCATAC
TCGTCGCTGACAGCCACTGCGCAGTGTATGTAGCCCGTACCTTCTTTACT
CTCAACCTCCATCCAAACTCTACTAATCACAAGCACAGCCCTCCTCGACT
TCTCCACTCCCGAACGTCTGCGCGTCCATCTCTCCTCCCTATCCACTCCG
CACTTCGCAACAAGTTACACCCTCGGCACCGTCGGCCTCATCGATGGCTC
AGTCTCCTACCTCTTTAGCACTGTCCCTCTCGATAAATTCCCCAGCCGAA
GTGCCCTGATCCCCCTCCGCAAGCTCTCCCCGGGCTACCGTCAAGTGCAA
GCACCCATCGCACCCATCGCAGAAACAATCCTCATCAACGATGACCTCAA
CGATGCCTCCGCATACACCACCATCGGCAAGAAGGCGACCCTCTTCCACG
CAACCCTACATCTCCCACCCCCGACAACCCTAAACGCCCTCTTCCTACGC
CGTATCTCCCCAACCATGCAACTCTCCCTAGCAGTCTGCTCAACCCGAGG
CCCGCCGCTCTCCAAATCCGCCCCGCAAGCCTCTCTCCTCGCCCAACTCT
CCCACAACACGGGCAAATACAACAACGAGTACCTCTTCAGCACGGATAAT
GCCCTCTTCGGCTGGCGTGGACTGTGGAACTTCGGCCCGGATCCCCGCGA
CCCTGTTGCTTCGGGCTCTTCTCCCAGGTTATCGTTGCTCTCTGCTGGCG
CGGAGGCTTACTATTCTCCTGTTTCGTCGCTGATTGGCATGTCAACGGGA
CTGAGATTTAGCACGTTGCCTGCTGCTACAGATGTTCCTTTATCAAACTC
ATCACCAACGGCTAGTACCAGCAGTGCTAATGCCAACACCCCCATCTCTA
CCTTCCCCTACACCCTCACTCTTACTTTGACACCGTTAACGGGGTCCCTC
TCAACTACGTACTCCCTCCGCGCATCCCCGAACCTAGCATTTAGCTCCCG
CTTCGGGTTTAACGTCTATAGCTGGGAAAGTGAGATGGTAGCGGGGTGCG
AACTCTGGCGGAAGAGTAAGTCCCGCTATCGTGATGATGGTGATGGTGTG
GAATGGGCGCGACGGAAGATACGCGAGAGCTTGTTTCCTCATCCGCATCC
TCATCTATCTACCTCCACGCCTAATGATATTAAAGATCTAGCGGGCCATG
CATTAGAGAAGAGTGGGAAAGGAGAAGAGGAGGAGAACGAATCCGTGTTG
AAAATTAGGGTGGATCAGTCGTGGAATGTGCGGTTGTTGTGGGAAGGTCG
GGTCAAGGAGTTGTTGGTGAGTGCTGGGGTGGGGTTGGGGCCGAGTTCGT
TTTCCTCGTCGTATGTTTCTGATGGGGGTGGAGAGTCCGGGGGGCTGAGG
AAGTCGTACTGGAGGGGAGTGGGGATCTCGGTGTCGTATTCGTCGTGATC
CTTGTGTATATTATTGACCTATATGATTGGCTCTATGAGAGGAGAGAGAG
AGAGCGGGGGAATATGTAGATACTATGATACGTGCTATGATAATACTGCA
ACTTAC back to topCoding sequence (CDS) from alignment at ch1:3066586..3068291- >KJC3_001197-T1 ID=KJC3_001197-T1|Name=KJC3_001197-T1|organism=Aspergillus niger KJC3|type=CDS|length=2814bp|location=Sequence derived from alignment at ch1:3066586..3068291- (Aspergillus niger KJC3) CCCTCCTCGACTTCTCCACTCCCGAACGTCTGCGCGTCCATCTCTCCTCC CTATCCACTCCGCACTTCGCAACAAGTTACACCCTCGGCACCGTCGGCCT CATCGATGGCTCAGTCTCCTACCTCTTTAGCACTGTCCCTCTCGATAAAT TCCCCAGCCGAAGTGCCCTGATCCCCCTCCGCAAGCTCTCCCCGGGCTAC CGTCAAGTGCAAGCACCCATCGCACCCATCGCAGAAACAATCCTCATCAA CGATGACCTCAACGATGCCTCCGCATACACCACCATCGGCAAGAAGGCGA CCCTCTTCCACGCAACCCTACATCTCCCACCCCCGACAACCCTAAACGCC CTCTTCCTACGCCGTATCTCCCCAACCATGCAACTCTCCCTAGCAGTCTG CTCAACCCGAGGCCCGCCGCTCTCCAAATCCGCCCCGCAAGCCTCTCTCC TCGCCCAACTCTCCCACAACACGGGCAAATACAACAACGAGTACCTCTTC AGCACGGATAATGCCCTCTTCGGCTGGCGTGGACTGTGGAACTTCGGCCC GGATCCCCGCGACCCTGTTGCTTCGGGCTCTTCTCCCAGGTTATCGTTGC TCTCTGCTGGCGCGGAGGCTTACTATTCTCCTGTTTCGTCGCTGATTGGC ATGTCAACGGGACTGAGATTTAGCACGTTGCCTGCTGCTACAGATGTTCC TTTATCAAACTCATCACCAACGGCTAGTACCAGCAGTGCTAATGCCAACA CCCCCATCTCTACCTTCCCCTACACCCTCACTCTTACTTTGACACCGTTA ACGGGGTCCCTCTCAACTACGTACTCCCTCCGCGCATCCCCGAACCTAGC ATTTAGCTCCCGCTTCGGGTTTAACGTCTATAGCTGGGAAAGTGAGATGG TAGCGGGGTGCGAACTCTGGCGGAAGAGTAAGTCCCGCTATCGTGATGAT GGTGATGGTGTGGAATGGGCGCGACGGAAGATACGCGAGAGCTTGTTTCC TCATCCGCATCCTCATCTATCTACCTCCACGCCTAATGATATTAAAGATC TAGCGGGCCATGCATTAGAGAAGAGTGGGAAAGGAGAAGAGGAGGAGAAC GAATCCGTGTTGAAAATTAGGGTGGATCAGTCGTGGAATGTGCGGTTGTT GTGGGAAGGTCGGGTCAAGGAGTTGTTGGTGAGTGCTGGGGTGGGGTTGG GGCCGAGTTCGTTTTCCTCGTCGTATGTTTCTGATGGGGGTGGAGAGTCC GGGGGGCTGAGGAAGTCGTACTGGAGGGGAGTGGGGATCTCGGTGTCGTA TTCGTCGTGAATGCTCGATTTCATGGATTACATCCAACTCGCCTTCGCCG AGGCGACGAATTGGAACCGCGACAATTCATACTCGTCGCTGACAGCCACT GCGCAGTCCCTCCTCGACTTCTCCACTCCCGAACGTCTGCGCGTCCATCT CTCCTCCCTATCCACTCCGCACTTCGCAACAAGTTACACCCTCGGCACCG TCGGCCTCATCGATGGCTCAGTCTCCTACCTCTTTAGCACTGTCCCTCTC GATAAATTCCCCAGCCGAAGTGCCCTGATCCCCCTCCGCAAGCTCTCCCC GGGCTACCGTCAAGTGCAAGCACCCATCGCACCCATCGCAGAAACAATCC TCATCAACGATGACCTCAACGATGCCTCCGCATACACCACCATCGGCAAG AAGGCGACCCTCTTCCACGCAACCCTACATCTCCCACCCCCGACAACCCT AAACGCCCTCTTCCTACGCCGTATCTCCCCAACCATGCAACTCTCCCTAG CAGTCTGCTCAACCCGAGGCCCGCCGCTCTCCAAATCCGCCCCGCAAGCC TCTCTCCTCGCCCAACTCTCCCACAACACGGGCAAATACAACAACGAGTA CCTCTTCAGCACGGATAATGCCCTCTTCGGCTGGCGTGGACTGTGGAACT TCGGCCCGGATCCCCGCGACCCTGTTGCTTCGGGCTCTTCTCCCAGGTTA TCGTTGCTCTCTGCTGGCGCGGAGGCTTACTATTCTCCTGTTTCGTCGCT GATTGGCATGTCAACGGGACTGAGATTTAGCACGTTGCCTGCTGCTACAG ATGTTCCTTTATCAAACTCATCACCAACGGCTAGTACCAGCAGTGCTAAT GCCAACACCCCCATCTCTACCTTCCCCTACACCCTCACTCTTACTTTGAC ACCGTTAACGGGGTCCCTCTCAACTACGTACTCCCTCCGCGCATCCCCGA ACCTAGCATTTAGCTCCCGCTTCGGGTTTAACGTCTATAGCTGGGAAAGT GAGATGGTAGCGGGGTGCGAACTCTGGCGGAAGAGTAAGTCCCGCTATCG TGATGATGGTGATGGTGTGGAATGGGCGCGACGGAAGATACGCGAGAGCT TGTTTCCTCATCCGCATCCTCATCTATCTACCTCCACGCCTAATGATATT AAAGATCTAGCGGGCCATGCATTAGAGAAGAGTGGGAAAGGAGAAGAGGA GGAGAACGAATCCGTGTTGAAAATTAGGGTGGATCAGTCGTGGAATGTGC GGTTGTTGTGGGAAGGTCGGGTCAAGGAGTTGTTGGTGAGTGCTGGGGTG GGGTTGGGGCCGAGTTCGTTTTCCTCGTCGTATGTTTCTGATGGGGGTGG AGAGTCCGGGGGGCTGAGGAAGTCGTACTGGAGGGGAGTGGGGATCTCGG TGTCGTATTCGTCGTGAATGCTCGATTTCATGGATTACATCCAACTCGCC TTCGCCGAGGCGACGAATTGGAACCGCGACAATTCATACTCGTCGCTGAC AGCCACTGCGCAGT back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
Term | Definition |
GO:0032865 | ERMES complex |
Vocabulary: Biological Process
Term | Definition |
GO:0007005 | mitochondrion organization |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type |
KJC3_001197-T1.utr3p1 | KJC3_001197-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type |
KJC3_001197-T1.utr5p1 | KJC3_001197-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
Property Name | Value |
Note | antiSMASH:Cluster_1.14 |
Note | antiSMASH:Cluster_1.13 |
Note | BUSCO:EOG09262TUR |
DBxref | InterPro:IPR027539 |
DBxref | PFAM:PF12519 |
Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
ch1 | supercontig | ch1:3066586..3068291 - |
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