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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch1:3072162..3072825+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_001200-T1 ID=KJC3_001200-T1|Name=KJC3_001200-T1|organism=Aspergillus niger KJC3|type=mRNA|length=664bp|location=Sequence derived from alignment at ch1:3072162..3072825+ (Aspergillus niger KJC3)
CGCCTCCGCTGTGAACATACAATCCAAGATAGCCGCAATGCCTCTACAAG
GAATCCGGACGGTGACGGCCGCTAGAGTATGTGTTTTTTTGGCATCTCAT
CCGCCTGTGCTCCCCAGACTAACTTGATCATCCAGAACGGTGTCGGTGCC
TTTATCCTACAATGCAAGCGGTTGGATTTCCACTACTGTGACTGGGCTGG
TAGCTCCCGGGGGATGGTGTATGTTATCGACTGTCCTGAATGATTATCAT
TGAGTCGGGGATGCTAATACTTGTCTTGTGATAGTGCGTACCTCAAGCAC
CACCTCCCTGCCTTCGCGAAAGCAAACCCTCAGATCGAAATCCGGGTATC
GCCGCGGCCACACAAGCACCCTGTAATCAAGGGACACTACATCAACGGAC
GGGAGAAGGCGGTTTGCGTGCGGAATCTCGAGCCTGAGCAAATAGGCAAG
AAGGCCGATCTGCTGAAGCAGGCCAGCGGAGAGAAGTTGAAGCGCACCAA
GAAGCCCGTCACGAGTATCAACGAGAGTGTCAGAGGCATCTGGTCCCCGT
ACCACGGTGGATACAAGTCGGTGTAAAGATGGGAGATTGTGCGATCATAC
GGTGGTGTTCATTTCTGGGTCAAATATCATTTTCCTATTCGATGTATTAT
GGGTTACTTTATCT back to topCoding sequence (CDS) from alignment at ch1:3072162..3072825+ >KJC3_001200-T1 ID=KJC3_001200-T1|Name=KJC3_001200-T1|organism=Aspergillus niger KJC3|type=CDS|length=1242bp|location=Sequence derived from alignment at ch1:3072162..3072825+ (Aspergillus niger KJC3)
ATGCCTCTACAAGGAATCCGGACGGTGACGGCCGCTAGAAACGGTGTCGG
TGCCTTTATCCTACAATGCAAGCGGTTGGATTTCCACTACTGTGACTGGG
CTGGTAGCTCCCGGGGGATGGTTGCGTACCTCAAGCACCACCTCCCTGCC
TTCGCGAAAGCAAACCCTCAGATCGAAATCCGGGTATCGCCGCGGCCACA
CAAGCACCCTGTAATCAAGGGACACTACATCAACGGACGGGAGAAGGCGG
TTTGCGTGCGGAATCTCGAGCCTGAGCAAATAGGCAAGAAGGCCGATCTG
CTGAAGCAGGCCAGCGGAGAGAAGTTGAAGCGCACCAAGAAGCCCGTCAC
GAGTATCAACGAGAGTGTCAGAGGCATCTGGTCCCCGTACCACGGTGGAT
ACAAGTCGGTGTAAATGCCTCTACAAGGAATCCGGACGGTGACGGCCGCT
AGAAACGGTGTCGGTGCCTTTATCCTACAATGCAAGCGGTTGGATTTCCA
CTACTGTGACTGGGCTGGTAGCTCCCGGGGGATGGTTGCGTACCTCAAGC
ACCACCTCCCTGCCTTCGCGAAAGCAAACCCTCAGATCGAAATCCGGGTA
TCGCCGCGGCCACACAAGCACCCTGTAATCAAGGGACACTACATCAACGG
ACGGGAGAAGGCGGTTTGCGTGCGGAATCTCGAGCCTGAGCAAATAGGCA
AGAAGGCCGATCTGCTGAAGCAGGCCAGCGGAGAGAAGTTGAAGCGCACC
AAGAAGCCCGTCACGAGTATCAACGAGAGTGTCAGAGGCATCTGGTCCCC
GTACCACGGTGGATACAAGTCGGTGTAAATGCCTCTACAAGGAATCCGGA
CGGTGACGGCCGCTAGAAACGGTGTCGGTGCCTTTATCCTACAATGCAAG
CGGTTGGATTTCCACTACTGTGACTGGGCTGGTAGCTCCCGGGGGATGGT
TGCGTACCTCAAGCACCACCTCCCTGCCTTCGCGAAAGCAAACCCTCAGA
TCGAAATCCGGGTATCGCCGCGGCCACACAAGCACCCTGTAATCAAGGGA
CACTACATCAACGGACGGGAGAAGGCGGTTTGCGTGCGGAATCTCGAGCC
TGAGCAAATAGGCAAGAAGGCCGATCTGCTGAAGCAGGCCAGCGGAGAGA
AGTTGAAGCGCACCAAGAAGCCCGTCACGAGTATCAACGAGAGTGTCAGA
GGCATCTGGTCCCCGTACCACGGTGGATACAAGTCGGTGTAA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_001200-T1.utr5p1 | KJC3_001200-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_001200-T1.utr3p1 | KJC3_001200-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG092656JA |
| DBxref | InterPro:IPR036249 |
| DBxref | InterPro:IPR007741 |
| DBxref | PFAM:PF05047 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch1 | supercontig | ch1:3072162..3072825 + |
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