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KJC3_001205-T1, KJC3_001205-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_001205-T1
Unique NameKJC3_001205-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch1:3082690..3083445-

Legend: CDSpolypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_001205-T1 ID=KJC3_001205-T1|Name=KJC3_001205-T1|organism=Aspergillus niger KJC3|type=mRNA|length=756bp|location=Sequence derived from alignment at ch1:3082690..3083445- (Aspergillus niger KJC3)
ATGGCCACTGCACTACCCACTTTGGCCATCCCAGGCCAGCGCCTAGGCTC
AATTGCCTCGTATGCCGCCGGTCCTGGTACACATGTGCAGAACGCAACCA
TCTATGCCTCGATCGCAGGCCCCGTGGTCGTCGATCAAGCGCAACCCAGC
TCCAAAGCAAAGCTCATCTTGAGCGTCTCCCGAACAGGCCCCAAGAAGGC
TGCTGCACCGGCACCCAGCACCAAGGCGTCCGCCAACCCCGCCAACACTG
GAAAGCCGAAGCTGAGATACAACACCCTCCCTGCCGTCGACTCGGTCGTG
TTGGCGCGCGTAACTCGCGTTCAGAAGCGACAAGCCACCGTATCTATTCT
AGTCGTGCTCGACGAATCCGCTAGCTCCCAGCCGCTCAACCCCTCACAGA
CTGCGTCGGACAATGACAACATCGAAGCTATCCTTTCGTCCGCGGCTAAT
CCGGAGAACCACAGCAACTCGGATGAACTTCGCTTCCAGGCTCTGATCCG
CAAGGAGGACGTGCGTGCTGTTGAGAAAGACCGCGTTGTCATGGATGAGA
TGTTCCGTGTTGGGGATATCGTTCGCGGAACGGTTATCTCCCTTGGTGAT
CAAAGCTTCTACTATCTTACCACGGCTAGGAATGATCTGGGTGTCGTTAT
GGCCCGCAGTGAGTCGGGTAATATGATGTTCCCGGTTAGCTGGAAGGAAA
TGAGAGATCCTGTTACTGGGGTTGCGGAGTTGAGGAAGGTAGCTAGGCCG
TTTTGA
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Coding sequence (CDS) from alignment at ch1:3082690..3083445-

>KJC3_001205-T1 ID=KJC3_001205-T1|Name=KJC3_001205-T1|organism=Aspergillus niger KJC3|type=CDS|length=756bp|location=Sequence derived from alignment at ch1:3082690..3083445- (Aspergillus niger KJC3)
ATGGCCACTGCACTACCCACTTTGGCCATCCCAGGCCAGCGCCTAGGCTC
AATTGCCTCGTATGCCGCCGGTCCTGGTACACATGTGCAGAACGCAACCA
TCTATGCCTCGATCGCAGGCCCCGTGGTCGTCGATCAAGCGCAACCCAGC
TCCAAAGCAAAGCTCATCTTGAGCGTCTCCCGAACAGGCCCCAAGAAGGC
TGCTGCACCGGCACCCAGCACCAAGGCGTCCGCCAACCCCGCCAACACTG
GAAAGCCGAAGCTGAGATACAACACCCTCCCTGCCGTCGACTCGGTCGTG
TTGGCGCGCGTAACTCGCGTTCAGAAGCGACAAGCCACCGTATCTATTCT
AGTCGTGCTCGACGAATCCGCTAGCTCCCAGCCGCTCAACCCCTCACAGA
CTGCGTCGGACAATGACAACATCGAAGCTATCCTTTCGTCCGCGGCTAAT
CCGGAGAACCACAGCAACTCGGATGAACTTCGCTTCCAGGCTCTGATCCG
CAAGGAGGACGTGCGTGCTGTTGAGAAAGACCGCGTTGTCATGGATGAGA
TGTTCCGTGTTGGGGATATCGTTCGCGGAACGGTTATCTCCCTTGGTGAT
CAAAGCTTCTACTATCTTACCACGGCTAGGAATGATCTGGGTGTCGTTAT
GGCCCGCAGTGAGTCGGGTAATATGATGTTCCCGGTTAGCTGGAAGGAAA
TGAGAGATCCTGTTACTGGGGTTGCGGAGTTGAGGAAGGTAGCTAGGCCG
TTTTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0000178exosome (RNase complex)
Vocabulary: Molecular Function
TermDefinition
GO:0003723RNA binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_001205KJC3_001205Aspergillus niger KJC3gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001205-T1.cdsKJC3_001205-T1.cdsAspergillus niger KJC3CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001205-T1.exon1KJC3_001205-T1.exon1Aspergillus niger KJC3exon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001205-T1KJC3_001205-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
NoteBUSCO:EOG092653O3
DBxrefInterPro:IPR012340
DBxrefInterPro:IPR025721
DBxrefInterPro:IPR019495
DBxrefPFAM:PF10447
DBxrefPFAM:PF14382
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch1supercontigch1:3082690..3083445 -
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