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KJC3_001220-T1, KJC3_001220-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_001220-T1
Unique NameKJC3_001220-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch1:3126689..3128474+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_001220-T1 ID=KJC3_001220-T1|Name=KJC3_001220-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1786bp|location=Sequence derived from alignment at ch1:3126689..3128474+ (Aspergillus niger KJC3)
GGGGCATCAGAGAATCTATATTGGTAAACAGATTAATATATTGAGATGCT
GCACAGGCACTGATCCACGAAGGTGGAGCATGTCTAGTAATAGTAAGATC
TCACTTCTCAACTGTAGTATGGAGCTTCAACGCGATATGCAGCTCCGTGC
ACATGTGGATCTGTCCCGATATCTATCATCTGCTTTGAGAATAGTAGCAA
TGCGCTAGAGTAGAGCCTCAAGCATGACTAGTGCAGGTGCTAGTTCGTTC
ATATCTATTGGTATAAATTAGTGGATTATGTTTGGTTTATCCTCTGTGCG
GACTGTCCTCGTCAAAGGCCTTGAAGTGGTCAGTCCTGTCATGAATCTGA
TTTCAACATCCCTTCCTATCATAATTACACTGTCTGCCCGACACTGCCAG
CATGTTGATTGCTGTATGACTGGCATGGTTGATTTCGAGCATATGCGCTG
TAATGCCAGGTACCGCACTCAGGAGCTTTGATGCAGGCCACATAGTAGGT
TACTTGCCTTAGCATCCCATTGGTTTGAGATCTCCGGGCTGCTGTAGCGT
ACGACTGGTGTGACTGGCATGGCTGGTAGTCAGTTCCTGCTAAGGCAACT
ATCTTGAAGCAGAATGGTAATCTTCGAGCATGCCGATCCATGTTTTGAGA
CTCGATATTTGCTTTGACGCAGCCTAATTTCACTATCCGTTCATAGTGGT
ATTAGTGTTTGAGCAGGCAGCTTTTCAGCTGTCCAGTATTCCAAAATCCT
TCAATATTGACCGCGGTGTTATCGGAGTTATGGGCATTCCTGATGGAACG
GAGTTAAGGCTCGATATTTCCGAACGGCGCAGTATATAGTGTTGAAGATG
GCTGTAGTTGCAACCACTCATAGAGCACCCTCAGCCTGCAGAAACATCTA
TTAGTCTGTACTTCACTATGGCTGCTGAGCAAAAGCTGGTCCTAATCACT
GGTACTTCCCCCACCTTAACAATTAGCTTCATCTAACAACTCCAGGGGCA
AACCAGGGCATCGGGTTTGAGACAGCCAAGAACCTAATTCTCTCCGACAA
TTACCATGTCATCTTAGGCTCGCGAGACCCAGCCAAGGGTGAAGAAGCCG
CCAAAACCTTGGAGGCCGTTCCCGGTATCAAAGGCAGCGTCTCGTCGATT
CAGATCGACGTGACAGACGACCAGTCTGTGGATAATGCTGCTGCCCAGAT
AAAAGCTCAGTATGGACGGCTTGATATCCTGGTCAACAATGCTGCGATGA
GCTCGATGAAGCATCCGCCAAGTCGGGAGGCAATGCGCCAGATTCTGGAT
GTAAATGTGGTCGGAGCACTCAGCACGACAGAAGCATTTCTCGACCTGCT
TCGAAACTCCTCTGAGAAGCGTCTCGTATTTGTCTCTTCGAGCACAGGCT
CCATTAGTCGTGCGGCAGACCCCTCATCTCCCTTCCACATAGCCAGTGCC
ACTGAGTATCGAGCCAGCAAGGCTGCACTGAATATGATGATGGTCTTGTA
CATGTGCCGTCTCAAGGATGAAGGTTTCAAAGTGTTTGGAGCAGATCCAG
GGTTGTGTGCCACGAACCTCACCGGTGATCCTGAATCTCTTCGACGACGA
AATGCTGCAGAGCCATCTGATGGAGGGGAGAGGGTGGCGACGGTGGTGAA
AGGGGAGCGAGATGCGGATGTTGGAAAGGTGTTGGGAGTATATGGAGTAT
CTCCATTCTGAATGTCCTGATAGAATTTGATTGTACCACCAGTCCGCTTA
TCTCAGTCTGTATACCACTGTAATCGAGTATGTTGT
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Coding sequence (CDS) from alignment at ch1:3126689..3128474+

>KJC3_001220-T1 ID=KJC3_001220-T1|Name=KJC3_001220-T1|organism=Aspergillus niger KJC3|type=CDS|length=1500bp|location=Sequence derived from alignment at ch1:3126689..3128474+ (Aspergillus niger KJC3)
ATGGCTGCTGAGCAAAAGCTGGTCCTAATCACTGGGGCAAACCAGGGCAT
CGGGTTTGAGACAGCCAAGAACCTAATTCTCTCCGACAATTACCATGTCA
TCTTAGGCTCGCGAGACCCAGCCAAGGGTGAAGAAGCCGCCAAAACCTTG
GAGGCCGTTCCCGGTATCAAAGGCAGCGTCTCGTCGATTCAGATCGACGT
GACAGACGACCAGTCTGTGGATAATGCTGCTGCCCAGATAAAAGCTCAGT
ATGGACGGCTTGATATCCTGGTCAACAATGCTGCGATGAGCTCGATGAAG
CATCCGCCAAGTCGGGAGGCAATGCGCCAGATTCTGGATGTAAATGTGGT
CGGAGCACTCAGCACGACAGAAGCATTTCTCGACCTGCTTCGAAACTCCT
CTGAGAAGCGTCTCGTATTTGTCTCTTCGAGCACAGGCTCCATTAGTCGT
GCGGCAGACCCCTCATCTCCCTTCCACATAGCCAGTGCCACTGAGTATCG
AGCCAGCAAGGCTGCACTGAATATGATGATGGTCTTGTACATGTGCCGTC
TCAAGGATGAAGGTTTCAAAGTGTTTGGAGCAGATCCAGGGTTGTGTGCC
ACGAACCTCACCGGTGATCCTGAATCTCTTCGACGACGAAATGCTGCAGA
GCCATCTGATGGAGGGGAGAGGGTGGCGACGGTGGTGAAAGGGGAGCGAG
ATGCGGATGTTGGAAAGGTGTTGGGAGTATATGGAGTATCTCCATTCTGA
ATGGCTGCTGAGCAAAAGCTGGTCCTAATCACTGGGGCAAACCAGGGCAT
CGGGTTTGAGACAGCCAAGAACCTAATTCTCTCCGACAATTACCATGTCA
TCTTAGGCTCGCGAGACCCAGCCAAGGGTGAAGAAGCCGCCAAAACCTTG
GAGGCCGTTCCCGGTATCAAAGGCAGCGTCTCGTCGATTCAGATCGACGT
GACAGACGACCAGTCTGTGGATAATGCTGCTGCCCAGATAAAAGCTCAGT
ATGGACGGCTTGATATCCTGGTCAACAATGCTGCGATGAGCTCGATGAAG
CATCCGCCAAGTCGGGAGGCAATGCGCCAGATTCTGGATGTAAATGTGGT
CGGAGCACTCAGCACGACAGAAGCATTTCTCGACCTGCTTCGAAACTCCT
CTGAGAAGCGTCTCGTATTTGTCTCTTCGAGCACAGGCTCCATTAGTCGT
GCGGCAGACCCCTCATCTCCCTTCCACATAGCCAGTGCCACTGAGTATCG
AGCCAGCAAGGCTGCACTGAATATGATGATGGTCTTGTACATGTGCCGTC
TCAAGGATGAAGGTTTCAAAGTGTTTGGAGCAGATCCAGGGTTGTGTGCC
ACGAACCTCACCGGTGATCCTGAATCTCTTCGACGACGAAATGCTGCAGA
GCCATCTGATGGAGGGGAGAGGGTGGCGACGGTGGTGAAAGGGGAGCGAG
ATGCGGATGTTGGAAAGGTGTTGGGAGTATATGGAGTATCTCCATTCTGA
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_001220KJC3_001220Aspergillus niger KJC3gene


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001220-T1.utr5p1KJC3_001220-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001220-T1.exon1KJC3_001220-T1.exon1Aspergillus niger KJC3exon
KJC3_001220-T1.exon2KJC3_001220-T1.exon2Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001220-T1.cdsKJC3_001220-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001220-T1.utr3p1KJC3_001220-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001220-T1KJC3_001220-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR036291
DBxrefInterPro:IPR002347
DBxrefPFAM:PF08659
DBxrefPFAM:PF01370
DBxrefPFAM:PF13561
DBxrefPFAM:PF00106
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch1supercontigch1:3126689..3128474 +
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