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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch1:3128628..3131570+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_001221-T1 ID=KJC3_001221-T1|Name=KJC3_001221-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2943bp|location=Sequence derived from alignment at ch1:3128628..3131570+ (Aspergillus niger KJC3)
AATTTGCTGAAAAACTGGTGGGTAACCATCCAGACACTTTATGCCACCAC
CACGATTACCCCTCGTTTGCCGGTCGCTCTTTTCACGCCGGTTCTCTCGT
TCGGCCATCATGGAGAGTCGCCAACAGCCTCCCTGGCAGCAACCGCCTGC
TCATCCCGACACTCGTCTGCCGCCCCTCAAAGTATGGAACTCCCTCACCA
GATCCAAGACGCCCTTTGTGCCATTGGACCCCAAAGGCCGGAAAGTTAAG
TGGTACGCTTGCGGTCCGACAGTCTACGACGATGCGCATCTGGGCCACGC
CAGGAACTATGTCAGTACCGATATCCTGCGTCGAATTCTCAGGGATTACT
TCAAGTTCGACGTGGAGTTTGTCATGAACATCACCGATGTCGATGACAAG
GTATGTGTCACTACCCCGCCGGTGACAATAGCTCTCGAGTGTTGACTCTG
GCTCCAAGATCATCCTGCGTGGTAGACAACAGCACCTGTTCAACAAGTAC
ATCGCCGAGCACCCCACCGTTACGCCCGACGTTCTCGAAACCGCCCGCAA
AGCATACAGCGCCTACATCAAGAAGAACCTTCCCCTGGTCGATCCCGATA
CCGAGCCGGAGAACTTTGTCGCAGAAGCCCAGAAGGTCTATGGGGTTGTG
CTTCAGGGAGGGGCTCTGGAGGCAGACAAAAAGCCCGGTGATGCGGAGGT
CAAGATCAAGATGCACATCAAGACCGTGACAGCCACGACGTCGGCGATTG
CGGAAGCCGCTCAGAAGCTCGCGGGCATCGATGCTGCATCCAGCAAGGCT
TTTTACGATGCCGCCCAGGATGTCTTCTGCTTCTATCTTGATGTGACGGA
GGGGTCTACAATTCCTGGCGATGCACATGAGATCTTCACGAAATTGACGA
AGAAGTACGAAGACCACTTCATGAGGGATATGCGGGATCTGAACGTCCTC
GACCCTGATGCTGTGACCAGAGTCACGGAATACGGCCAGCAGATTGCCGA
CTTCGTCGAAAAGATCGTCGCGAACAAGTTTGGCTATGTCACCTCCGATG
GCTCCGTCTACTTCGACATCAAGGCATTCGAAGAAGCTGGAAACCACTAT
GCGCGACTTGAGCCTTGGAACCGCAACAACCAACCTCTGCTAAGGGACGG
TGAGGGTGCGCTGTCGCGGGCAACCGAGAAGAAGTCTTCAGATGATTTTG
CCCTCTGGAAGGCATCTCGTCCGGGAGAGCCCAGCTGGTCAAGCAAGTGG
GGTCAAGGACGGCCAGGCTGGCACATCGAGTGCTCGGCAATGGCATCGAG
CTGCCTTGGTAGTCAGATTGATATCCACTCCGGTGGCATTGACCTTGCAT
TCCCTCATCACGACAACGAGCTTGCGCAGAGTGAAGCCTACTGGTGCGAG
CATAAGCAGCAGTGGGTCAACTACTTCCTGCACATGGGCCATCTGTCCAT
CCAGGGTTCCAAAATGTCGAAATCCTTGAAGAACTTCACTACCGTCAAGG
ACGCTCTCGAGCGCGGTGACTACACTCCTCGCAGCTTGAGAATCGTCTTC
TTGCTTGGTGGATGGCGTGATGGTGTCGAGATCACCGATGATCTCATCAA
GAATGCCTCTTCCTGGGAAGAGAAGCTCAATAACTTCTTCGTCAAGGCGA
AGGACCCCTCCAGCTTCCGTTCTTCCGATGAGGCGCCGACTTCTTCATCC
GAGACCTTATCACAGGCCCTCAAATCTACACAAGAAAAGGTCCATGAATA
CTTCTGTGACTCCTTTGATACCCCCAAGGTCATGGCCGCCATCTCTGAGT
TGGTCACGACGTTCAACGCCCTTGACAGTCAAACCTTGGATCTCAAGGTG
GTTGAATCCATGGGCACATGGGTCACCCAGATTGTCACTATCTTTGGCTT
GAATGGCGCTGCCTCTCCTGACAGCTGTGGCATCGGCTGGGAAGGCACTG
ACATTCCGGAAGCAGCCAAGCGTTTCCTATACCCACTGTCCGCCATGCGT
GACACTCTGCGCCAAGCTGCCATGTCCGGTACTCCCATCACCGCCGAGCA
AGTGAAGGATATCGTCGCCACCTCTGCCACCAAGGAAGCAACTGTGTCCG
ATTCTGACAAGCCCTATTCCCAAGTCCTGGACAATTTCACTTCTCAATTG
GCCTCGCTCAGCTTGGACGATACCAAGCAGGCATCCAAGGACATACTTTC
TCTCTGCGATCGTTTGCGTAACGTCGATCTCTTTAACCTGGGCATTTACT
TGGAAGACCGCGAAAACAAGCCCGCACTCGTCCGTCCTGTCACCAAGGAT
ATGCTGCAGGCCCGCGAGGAACAAGCTCGTAAAGCCTTGCTGAAGCAGCA
AGAGAAAGAGAAGCAAGAGAAGCTTGCCCAGGAACGGCTCGAGAAAGGAA
AGCTTAATCCCGTGGAAATGTTCCGCACCAGCGAATACAGCGCCTGGGAC
GAAGACGGCATTCCCACGAAAGATGCGGCGGGAGAGCCTCTCGCCAAGAG
TAAGAGCAAGAAGCTCCGGAAAGATTGGGAGCGCCAGAAGAAGGCCCACG
AAGCCTGGCTTGCAAGCCAGAATGGAAAATGATAGATTATATGAATCAAT
GAATAATACACCATCCGTCTTGGTTGACCCAGAAGGATCATCATTCTAAA
TCCGACGTGCATAATCATCTGGAAGTCATCCATTCGTCACCTTGATTTAG
GAACTCATCATGAGGTAACCATGCCAGTAGTACTACGCATCGGTTACATA
CAGCCATGTCCCTTTCCTCTAATTCTGCAGTTCTGTATCCCCTGTGTCAT
ATCCATATTCACTGCGCATTCCTAAAATGGCTCTTGACAATGCTAGACGT
GTCTACAGTGAGTACCATTCATGTCATGTACCAGCTTTCGTTCTCACAAT
CGTTGGCAACCAGTGACGCGTAGTGTCACGGCCCAGATTTCCC back to topCoding sequence (CDS) from alignment at ch1:3128628..3131570+ >KJC3_001221-T1 ID=KJC3_001221-T1|Name=KJC3_001221-T1|organism=Aspergillus niger KJC3|type=CDS|length=4968bp|location=Sequence derived from alignment at ch1:3128628..3131570+ (Aspergillus niger KJC3)
ATGCCACCACCACGATTACCCCTCGTTTGCCGGTCGCTCTTTTCACGCCG
GTTCTCTCGTTCGGCCATCATGGAGAGTCGCCAACAGCCTCCCTGGCAGC
AACCGCCTGCTCATCCCGACACTCGTCTGCCGCCCCTCAAAGTATGGAAC
TCCCTCACCAGATCCAAGACGCCCTTTGTGCCATTGGACCCCAAAGGCCG
GAAAGTTAAGTGGTACGCTTGCGGTCCGACAGTCTACGACGATGCGCATC
TGGGCCACGCCAGGAACTATGTCAGTACCGATATCCTGCGTCGAATTCTC
AGGGATTACTTCAAGTTCGACGTGGAGTTTGTCATGAACATCACCGATGT
CGATGACAAGATCATCCTGCGTGGTAGACAACAGCACCTGTTCAACAAGT
ACATCGCCGAGCACCCCACCGTTACGCCCGACGTTCTCGAAACCGCCCGC
AAAGCATACAGCGCCTACATCAAGAAGAACCTTCCCCTGGTCGATCCCGA
TACCGAGCCGGAGAACTTTGTCGCAGAAGCCCAGAAGGTCTATGGGGTTG
TGCTTCAGGGAGGGGCTCTGGAGGCAGACAAAAAGCCCGGTGATGCGGAG
GTCAAGATCAAGATGCACATCAAGACCGTGACAGCCACGACGTCGGCGAT
TGCGGAAGCCGCTCAGAAGCTCGCGGGCATCGATGCTGCATCCAGCAAGG
CTTTTTACGATGCCGCCCAGGATGTCTTCTGCTTCTATCTTGATGTGACG
GAGGGGTCTACAATTCCTGGCGATGCACATGAGATCTTCACGAAATTGAC
GAAGAAGTACGAAGACCACTTCATGAGGGATATGCGGGATCTGAACGTCC
TCGACCCTGATGCTGTGACCAGAGTCACGGAATACGGCCAGCAGATTGCC
GACTTCGTCGAAAAGATCGTCGCGAACAAGTTTGGCTATGTCACCTCCGA
TGGCTCCGTCTACTTCGACATCAAGGCATTCGAAGAAGCTGGAAACCACT
ATGCGCGACTTGAGCCTTGGAACCGCAACAACCAACCTCTGCTAAGGGAC
GGTGAGGGTGCGCTGTCGCGGGCAACCGAGAAGAAGTCTTCAGATGATTT
TGCCCTCTGGAAGGCATCTCGTCCGGGAGAGCCCAGCTGGTCAAGCAAGT
GGGGTCAAGGACGGCCAGGCTGGCACATCGAGTGCTCGGCAATGGCATCG
AGCTGCCTTGGTAGTCAGATTGATATCCACTCCGGTGGCATTGACCTTGC
ATTCCCTCATCACGACAACGAGCTTGCGCAGAGTGAAGCCTACTGGTGCG
AGCATAAGCAGCAGTGGGTCAACTACTTCCTGCACATGGGCCATCTGTCC
ATCCAGGGTTCCAAAATGTCGAAATCCTTGAAGAACTTCACTACCGTCAA
GGACGCTCTCGAGCGCGGTGACTACACTCCTCGCAGCTTGAGAATCGTCT
TCTTGCTTGGTGGATGGCGTGATGGTGTCGAGATCACCGATGATCTCATC
AAGAATGCCTCTTCCTGGGAAGAGAAGCTCAATAACTTCTTCGTCAAGGC
GAAGGACCCCTCCAGCTTCCGTTCTTCCGATGAGGCGCCGACTTCTTCAT
CCGAGACCTTATCACAGGCCCTCAAATCTACACAAGAAAAGGTCCATGAA
TACTTCTGTGACTCCTTTGATACCCCCAAGGTCATGGCCGCCATCTCTGA
GTTGGTCACGACGTTCAACGCCCTTGACAGTCAAACCTTGGATCTCAAGG
TGGTTGAATCCATGGGCACATGGGTCACCCAGATTGTCACTATCTTTGGC
TTGAATGGCGCTGCCTCTCCTGACAGCTGTGGCATCGGCTGGGAAGGCAC
TGACATTCCGGAAGCAGCCAAGCGTTTCCTATACCCACTGTCCGCCATGC
GTGACACTCTGCGCCAAGCTGCCATGTCCGGTACTCCCATCACCGCCGAG
CAAGTGAAGGATATCGTCGCCACCTCTGCCACCAAGGAAGCAACTGTGTC
CGATTCTGACAAGCCCTATTCCCAAGTCCTGGACAATTTCACTTCTCAAT
TGGCCTCGCTCAGCTTGGACGATACCAAGCAGGCATCCAAGGACATACTT
TCTCTCTGCGATCGTTTGCGTAACGTCGATCTCTTTAACCTGGGCATTTA
CTTGGAAGACCGCGAAAACAAGCCCGCACTCGTCCGTCCTGTCACCAAGG
ATATGCTGCAGGCCCGCGAGGAACAAGCTCGTAAAGCCTTGCTGAAGCAG
CAAGAGAAAGAGAAGCAAGAGAAGCTTGCCCAGGAACGGCTCGAGAAAGG
AAAGCTTAATCCCGTGGAAATGTTCCGCACCAGCGAATACAGCGCCTGGG
ACGAAGACGGCATTCCCACGAAAGATGCGGCGGGAGAGCCTCTCGCCAAG
AGTAAGAGCAAGAAGCTCCGGAAAGATTGGGAGCGCCAGAAGAAGGCCCA
CGAAGCCTGGCTTGCAAGCCAGAATGGAAAATGAATGCCACCACCACGAT
TACCCCTCGTTTGCCGGTCGCTCTTTTCACGCCGGTTCTCTCGTTCGGCC
ATCATGGAGAGTCGCCAACAGCCTCCCTGGCAGCAACCGCCTGCTCATCC
CGACACTCGTCTGCCGCCCCTCAAAGTATGGAACTCCCTCACCAGATCCA
AGACGCCCTTTGTGCCATTGGACCCCAAAGGCCGGAAAGTTAAGTGGTAC
GCTTGCGGTCCGACAGTCTACGACGATGCGCATCTGGGCCACGCCAGGAA
CTATGTCAGTACCGATATCCTGCGTCGAATTCTCAGGGATTACTTCAAGT
TCGACGTGGAGTTTGTCATGAACATCACCGATGTCGATGACAAGATCATC
CTGCGTGGTAGACAACAGCACCTGTTCAACAAGTACATCGCCGAGCACCC
CACCGTTACGCCCGACGTTCTCGAAACCGCCCGCAAAGCATACAGCGCCT
ACATCAAGAAGAACCTTCCCCTGGTCGATCCCGATACCGAGCCGGAGAAC
TTTGTCGCAGAAGCCCAGAAGGTCTATGGGGTTGTGCTTCAGGGAGGGGC
TCTGGAGGCAGACAAAAAGCCCGGTGATGCGGAGGTCAAGATCAAGATGC
ACATCAAGACCGTGACAGCCACGACGTCGGCGATTGCGGAAGCCGCTCAG
AAGCTCGCGGGCATCGATGCTGCATCCAGCAAGGCTTTTTACGATGCCGC
CCAGGATGTCTTCTGCTTCTATCTTGATGTGACGGAGGGGTCTACAATTC
CTGGCGATGCACATGAGATCTTCACGAAATTGACGAAGAAGTACGAAGAC
CACTTCATGAGGGATATGCGGGATCTGAACGTCCTCGACCCTGATGCTGT
GACCAGAGTCACGGAATACGGCCAGCAGATTGCCGACTTCGTCGAAAAGA
TCGTCGCGAACAAGTTTGGCTATGTCACCTCCGATGGCTCCGTCTACTTC
GACATCAAGGCATTCGAAGAAGCTGGAAACCACTATGCGCGACTTGAGCC
TTGGAACCGCAACAACCAACCTCTGCTAAGGGACGGTGAGGGTGCGCTGT
CGCGGGCAACCGAGAAGAAGTCTTCAGATGATTTTGCCCTCTGGAAGGCA
TCTCGTCCGGGAGAGCCCAGCTGGTCAAGCAAGTGGGGTCAAGGACGGCC
AGGCTGGCACATCGAGTGCTCGGCAATGGCATCGAGCTGCCTTGGTAGTC
AGATTGATATCCACTCCGGTGGCATTGACCTTGCATTCCCTCATCACGAC
AACGAGCTTGCGCAGAGTGAAGCCTACTGGTGCGAGCATAAGCAGCAGTG
GGTCAACTACTTCCTGCACATGGGCCATCTGTCCATCCAGGGTTCCAAAA
TGTCGAAATCCTTGAAGAACTTCACTACCGTCAAGGACGCTCTCGAGCGC
GGTGACTACACTCCTCGCAGCTTGAGAATCGTCTTCTTGCTTGGTGGATG
GCGTGATGGTGTCGAGATCACCGATGATCTCATCAAGAATGCCTCTTCCT
GGGAAGAGAAGCTCAATAACTTCTTCGTCAAGGCGAAGGACCCCTCCAGC
TTCCGTTCTTCCGATGAGGCGCCGACTTCTTCATCCGAGACCTTATCACA
GGCCCTCAAATCTACACAAGAAAAGGTCCATGAATACTTCTGTGACTCCT
TTGATACCCCCAAGGTCATGGCCGCCATCTCTGAGTTGGTCACGACGTTC
AACGCCCTTGACAGTCAAACCTTGGATCTCAAGGTGGTTGAATCCATGGG
CACATGGGTCACCCAGATTGTCACTATCTTTGGCTTGAATGGCGCTGCCT
CTCCTGACAGCTGTGGCATCGGCTGGGAAGGCACTGACATTCCGGAAGCA
GCCAAGCGTTTCCTATACCCACTGTCCGCCATGCGTGACACTCTGCGCCA
AGCTGCCATGTCCGGTACTCCCATCACCGCCGAGCAAGTGAAGGATATCG
TCGCCACCTCTGCCACCAAGGAAGCAACTGTGTCCGATTCTGACAAGCCC
TATTCCCAAGTCCTGGACAATTTCACTTCTCAATTGGCCTCGCTCAGCTT
GGACGATACCAAGCAGGCATCCAAGGACATACTTTCTCTCTGCGATCGTT
TGCGTAACGTCGATCTCTTTAACCTGGGCATTTACTTGGAAGACCGCGAA
AACAAGCCCGCACTCGTCCGTCCTGTCACCAAGGATATGCTGCAGGCCCG
CGAGGAACAAGCTCGTAAAGCCTTGCTGAAGCAGCAAGAGAAAGAGAAGC
AAGAGAAGCTTGCCCAGGAACGGCTCGAGAAAGGAAAGCTTAATCCCGTG
GAAATGTTCCGCACCAGCGAATACAGCGCCTGGGACGAAGACGGCATTCC
CACGAAAGATGCGGCGGGAGAGCCTCTCGCCAAGAGTAAGAGCAAGAAGC
TCCGGAAAGATTGGGAGCGCCAGAAGAAGGCCCACGAAGCCTGGCTTGCA
AGCCAGAATGGAAAATGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0004812 | aminoacyl-tRNA ligase activity |
| GO:0000166 | nucleotide binding |
| GO:0005524 | ATP binding |
| GO:0004817 | cysteine-tRNA ligase activity |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006418 | tRNA aminoacylation for protein translation |
| GO:0006423 | cysteinyl-tRNA aminoacylation |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_001221-T1.utr5p1 | KJC3_001221-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG092611G7 |
| DBxref | InterPro:IPR009080 |
| DBxref | InterPro:IPR015803 |
| DBxref | InterPro:IPR014729 |
| DBxref | InterPro:IPR032678 |
| DBxref | InterPro:IPR024909 |
| DBxref | PFAM:PF01406 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch1 | supercontig | ch1:3128628..3131570 + |
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