You are here

Home

KJC3_001224-T1, KJC3_001224-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_001224-T1
Unique NameKJC3_001224-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch1:3135751..3138118+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_001224-T1 ID=KJC3_001224-T1|Name=KJC3_001224-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2368bp|location=Sequence derived from alignment at ch1:3135751..3138118+ (Aspergillus niger KJC3)
ATGGCTGCCAAAGAGATGAATGAGAAATCATTCAAATCCCCGCAAGTTAG
CGCGGATATCGAGATTCAACAAGGCGGATTCGACGAAATACAACCGGAAT
TTGACCTTTCTGAACAAGAGAAGGAGCAAAATGACTTTGACTATGAATCA
GAGCATTCGCCTTTCCCAGAAGGTATGCGGCCTTTCATATACACACTGAC
CCCTCTAATGGGTGACACGCCTAGTACGCGCGGTCGTCCCTGAGACGGAC
GACCCAGGTCTGCCCGTCAACACATTCCGCATGTGGGTGCTTGGGTTCAT
CTTCACCATTGTTGGATCGGGAATCAATCAATTCTTCTCGCTTCGATATC
CGTCGGTCCATATTGTGTCATTGGTAGCAGAGCTACTGGCCTATCCGTGT
GGCGTCTTCCTGGCTAAGGTCTTGCCTCTATGGACTATAAGCCTTGGACG
GCTTGGATCGTTCACCCTCAACCCAGATCGCCATTTCAATATCAAAGAGC
ATGCTCTCATAGTCATCATGAGCAACGTATCTTTCGGCTATGGAAGCGCA
GATTCCACCAATATCATCCAGGCGTCGAGCGCCAGGTTCTACAATTTCGG
TCTCTCAGCCGGCTTTTCTGTCCTCGTGGTCCTTTGCGCACAATTGTTGG
GATTTGGAGTCGCTGGCCTGGCTGCACCGTGGCTAGTTGAGCCAGCAAGG
ATCATCTGGCCCCAGGTCCTTTCTAACTGTGCCATGCTGGAGACGCTCCA
TTCACGCGCAAACACCGTCGCCAATGGCTGGAAGATTTCCCGTCTGCGGT
TCTTCCTTTACGTCACTGCAGGTGGTTTCGTGTGGTATTTCTTCCCAGGG
TTGATGTTCACTGCCCTCTCGTACTTTACGTGGATTTGCTGGATCGCTCC
CCGCAATGTTGTCGTAAATCAGTTGTTCGGAATGCAGACTGGCTTAGGAC
TAAGTCCTATCACATTCGATTGGAGTCAGGTTGCCTACAACACGAACCCC
CTGCTGTCACCTTCATGGGCCGCGATCAACGTCTTTGCCGGATTCGCCCT
GTTCTTCTGGATTGTCGTTCCAGGAATCTACTACTCCAACACATGGTTCA
CAGCCTATCTCCCCCTTATGACTGCCGACGTCTATGACCGGACCGGCACG
GTCTACGACACAGCCCGTGTCATCAGCGCCGACAACACCCTGGACGTCGA
TGCCTACAGACAATATTCGCCCCCATACTTACCAGCTACATACGCATTCG
TCTACGGCCTGTCCTTCGCCTCAATCACCGCCGTTCTAACCCACATCGGC
GTCTGGCACGGCAAAGAAGTCTGGGCCGCACTAAAAGGCAAAAACAAGCT
CGACATTCATGCCCGTCTCATGAAATCCTACAAAAAGACCCCATGGTACT
GGTACGCCGCCATCATCGCCATCATCACCGCCATCGCCATCGTCATGGTC
GAGGTCTACCACACCAAGCTCCCCGTCTACGGCGTCTTCCTTGGCCTCAT
CATCCCCGCCATCTACATGGTCCCCTGCGGCATCATCCAAGGCATCACCA
ACGTCGACGCCAACCAACTCAATGTCCTAGCCGAATTCATTGGCGGCTAC
ATGTTCGAAGGCAAGCCCCTGGCCAACATGATCTTCAAGATTCTCAGCAC
CGACGTCGTCGGCCAAGGCGTCTACTTCGCCATGGATATGAAACTAGGCC
ACTACCTCAAAATCCCCCCTCGCACCCTCTTCATGGCCCAAGGCCTCGCC
ACCATCCTCGGCGCCCTTACCCAAGCCGGCGTCACCATCTGGATGCTCGG
CCACATCCAAGATATCTGCTCCTCCGACCAATCCGACGGCTTCACCTGTC
CCAACGGCCGAACCGTCTACTCCTCCTCCGTCATCTGGGGCCTCGTGGGC
CCCCGTCGTCTCTACTCCGTCGGCCGCATCTACTCCTCCCTCCTACACTT
CTTCTGGATCGGCGCCATCGCCCCCCTCATCACCTACTTCCTCTACAAGT
ACACCCGCAAACAATTCTGGAAATACATCAACTGGCCGCTCATCTTCGTC
GGAACATATAATGTTCCCCCCGCCACCGGCATCAATTACTCCAGCTGGGC
CCTCGTGAACTTCGCCTTTAACCACTTCATCAAAAAGCGCTTCTTCGCTT
GGTGGAAGAAATACAACTATATTCTTGCTGCCGCGCTGGACACGGGTCTT
GCGCTTAGTGGTATAGTTATCTTCTTCTGTATTTCGTACCCCGGGGCTGT
GTTTCCCGATTGGTGGGGAAATACGGTCTATGTCAATACGGCGGATGGGG
AGGGCGTCGCATATAAGTCTATGCCTGAGGTCGGGTATTTCGGGCCAGCG
AATGGGACGTGGAGTTGA
back to top

Coding sequence (CDS) from alignment at ch1:3135751..3138118+

>KJC3_001224-T1 ID=KJC3_001224-T1|Name=KJC3_001224-T1|organism=Aspergillus niger KJC3|type=CDS|length=4632bp|location=Sequence derived from alignment at ch1:3135751..3138118+ (Aspergillus niger KJC3)
ATGGCTGCCAAAGAGATGAATGAGAAATCATTCAAATCCCCGCAAGTTAG
CGCGGATATCGAGATTCAACAAGGCGGATTCGACGAAATACAACCGGAAT
TTGACCTTTCTGAACAAGAGAAGGAGCAAAATGACTTTGACTATGAATCA
GAGCATTCGCCTTTCCCAGAAGTACGCGCGGTCGTCCCTGAGACGGACGA
CCCAGGTCTGCCCGTCAACACATTCCGCATGTGGGTGCTTGGGTTCATCT
TCACCATTGTTGGATCGGGAATCAATCAATTCTTCTCGCTTCGATATCCG
TCGGTCCATATTGTGTCATTGGTAGCAGAGCTACTGGCCTATCCGTGTGG
CGTCTTCCTGGCTAAGGTCTTGCCTCTATGGACTATAAGCCTTGGACGGC
TTGGATCGTTCACCCTCAACCCAGATCGCCATTTCAATATCAAAGAGCAT
GCTCTCATAGTCATCATGAGCAACGTATCTTTCGGCTATGGAAGCGCAGA
TTCCACCAATATCATCCAGGCGTCGAGCGCCAGGTTCTACAATTTCGGTC
TCTCAGCCGGCTTTTCTGTCCTCGTGGTCCTTTGCGCACAATTGTTGGGA
TTTGGAGTCGCTGGCCTGGCTGCACCGTGGCTAGTTGAGCCAGCAAGGAT
CATCTGGCCCCAGGTCCTTTCTAACTGTGCCATGCTGGAGACGCTCCATT
CACGCGCAAACACCGTCGCCAATGGCTGGAAGATTTCCCGTCTGCGGTTC
TTCCTTTACGTCACTGCAGGTGGTTTCGTGTGGTATTTCTTCCCAGGGTT
GATGTTCACTGCCCTCTCGTACTTTACGTGGATTTGCTGGATCGCTCCCC
GCAATGTTGTCGTAAATCAGTTGTTCGGAATGCAGACTGGCTTAGGACTA
AGTCCTATCACATTCGATTGGAGTCAGGTTGCCTACAACACGAACCCCCT
GCTGTCACCTTCATGGGCCGCGATCAACGTCTTTGCCGGATTCGCCCTGT
TCTTCTGGATTGTCGTTCCAGGAATCTACTACTCCAACACATGGTTCACA
GCCTATCTCCCCCTTATGACTGCCGACGTCTATGACCGGACCGGCACGGT
CTACGACACAGCCCGTGTCATCAGCGCCGACAACACCCTGGACGTCGATG
CCTACAGACAATATTCGCCCCCATACTTACCAGCTACATACGCATTCGTC
TACGGCCTGTCCTTCGCCTCAATCACCGCCGTTCTAACCCACATCGGCGT
CTGGCACGGCAAAGAAGTCTGGGCCGCACTAAAAGGCAAAAACAAGCTCG
ACATTCATGCCCGTCTCATGAAATCCTACAAAAAGACCCCATGGTACTGG
TACGCCGCCATCATCGCCATCATCACCGCCATCGCCATCGTCATGGTCGA
GGTCTACCACACCAAGCTCCCCGTCTACGGCGTCTTCCTTGGCCTCATCA
TCCCCGCCATCTACATGGTCCCCTGCGGCATCATCCAAGGCATCACCAAC
GTCGACGCCAACCAACTCAATGTCCTAGCCGAATTCATTGGCGGCTACAT
GTTCGAAGGCAAGCCCCTGGCCAACATGATCTTCAAGATTCTCAGCACCG
ACGTCGTCGGCCAAGGCGTCTACTTCGCCATGGATATGAAACTAGGCCAC
TACCTCAAAATCCCCCCTCGCACCCTCTTCATGGCCCAAGGCCTCGCCAC
CATCCTCGGCGCCCTTACCCAAGCCGGCGTCACCATCTGGATGCTCGGCC
ACATCCAAGATATCTGCTCCTCCGACCAATCCGACGGCTTCACCTGTCCC
AACGGCCGAACCGTCTACTCCTCCTCCGTCATCTGGGGCCTCGTGGGCCC
CCGTCGTCTCTACTCCGTCGGCCGCATCTACTCCTCCCTCCTACACTTCT
TCTGGATCGGCGCCATCGCCCCCCTCATCACCTACTTCCTCTACAAGTAC
ACCCGCAAACAATTCTGGAAATACATCAACTGGCCGCTCATCTTCGTCGG
AACATATAATGTTCCCCCCGCCACCGGCATCAATTACTCCAGCTGGGCCC
TCGTGAACTTCGCCTTTAACCACTTCATCAAAAAGCGCTTCTTCGCTTGG
TGGAAGAAATACAACTATATTCTTGCTGCCGCGCTGGACACGGGTCTTGC
GCTTAGTGGTATAGTTATCTTCTTCTGTATTTCGTACCCCGGGGCTGTGT
TTCCCGATTGGTGGGGAAATACGGTCTATGTCAATACGGCGGATGGGGAG
GGCGTCGCATATAAGTCTATGCCTGAGGTCGGGTATTTCGGGCCAGCGAA
TGGGACGTGGAGTTGAATGGCTGCCAAAGAGATGAATGAGAAATCATTCA
AATCCCCGCAAGTTAGCGCGGATATCGAGATTCAACAAGGCGGATTCGAC
GAAATACAACCGGAATTTGACCTTTCTGAACAAGAGAAGGAGCAAAATGA
CTTTGACTATGAATCAGAGCATTCGCCTTTCCCAGAAGTACGCGCGGTCG
TCCCTGAGACGGACGACCCAGGTCTGCCCGTCAACACATTCCGCATGTGG
GTGCTTGGGTTCATCTTCACCATTGTTGGATCGGGAATCAATCAATTCTT
CTCGCTTCGATATCCGTCGGTCCATATTGTGTCATTGGTAGCAGAGCTAC
TGGCCTATCCGTGTGGCGTCTTCCTGGCTAAGGTCTTGCCTCTATGGACT
ATAAGCCTTGGACGGCTTGGATCGTTCACCCTCAACCCAGATCGCCATTT
CAATATCAAAGAGCATGCTCTCATAGTCATCATGAGCAACGTATCTTTCG
GCTATGGAAGCGCAGATTCCACCAATATCATCCAGGCGTCGAGCGCCAGG
TTCTACAATTTCGGTCTCTCAGCCGGCTTTTCTGTCCTCGTGGTCCTTTG
CGCACAATTGTTGGGATTTGGAGTCGCTGGCCTGGCTGCACCGTGGCTAG
TTGAGCCAGCAAGGATCATCTGGCCCCAGGTCCTTTCTAACTGTGCCATG
CTGGAGACGCTCCATTCACGCGCAAACACCGTCGCCAATGGCTGGAAGAT
TTCCCGTCTGCGGTTCTTCCTTTACGTCACTGCAGGTGGTTTCGTGTGGT
ATTTCTTCCCAGGGTTGATGTTCACTGCCCTCTCGTACTTTACGTGGATT
TGCTGGATCGCTCCCCGCAATGTTGTCGTAAATCAGTTGTTCGGAATGCA
GACTGGCTTAGGACTAAGTCCTATCACATTCGATTGGAGTCAGGTTGCCT
ACAACACGAACCCCCTGCTGTCACCTTCATGGGCCGCGATCAACGTCTTT
GCCGGATTCGCCCTGTTCTTCTGGATTGTCGTTCCAGGAATCTACTACTC
CAACACATGGTTCACAGCCTATCTCCCCCTTATGACTGCCGACGTCTATG
ACCGGACCGGCACGGTCTACGACACAGCCCGTGTCATCAGCGCCGACAAC
ACCCTGGACGTCGATGCCTACAGACAATATTCGCCCCCATACTTACCAGC
TACATACGCATTCGTCTACGGCCTGTCCTTCGCCTCAATCACCGCCGTTC
TAACCCACATCGGCGTCTGGCACGGCAAAGAAGTCTGGGCCGCACTAAAA
GGCAAAAACAAGCTCGACATTCATGCCCGTCTCATGAAATCCTACAAAAA
GACCCCATGGTACTGGTACGCCGCCATCATCGCCATCATCACCGCCATCG
CCATCGTCATGGTCGAGGTCTACCACACCAAGCTCCCCGTCTACGGCGTC
TTCCTTGGCCTCATCATCCCCGCCATCTACATGGTCCCCTGCGGCATCAT
CCAAGGCATCACCAACGTCGACGCCAACCAACTCAATGTCCTAGCCGAAT
TCATTGGCGGCTACATGTTCGAAGGCAAGCCCCTGGCCAACATGATCTTC
AAGATTCTCAGCACCGACGTCGTCGGCCAAGGCGTCTACTTCGCCATGGA
TATGAAACTAGGCCACTACCTCAAAATCCCCCCTCGCACCCTCTTCATGG
CCCAAGGCCTCGCCACCATCCTCGGCGCCCTTACCCAAGCCGGCGTCACC
ATCTGGATGCTCGGCCACATCCAAGATATCTGCTCCTCCGACCAATCCGA
CGGCTTCACCTGTCCCAACGGCCGAACCGTCTACTCCTCCTCCGTCATCT
GGGGCCTCGTGGGCCCCCGTCGTCTCTACTCCGTCGGCCGCATCTACTCC
TCCCTCCTACACTTCTTCTGGATCGGCGCCATCGCCCCCCTCATCACCTA
CTTCCTCTACAAGTACACCCGCAAACAATTCTGGAAATACATCAACTGGC
CGCTCATCTTCGTCGGAACATATAATGTTCCCCCCGCCACCGGCATCAAT
TACTCCAGCTGGGCCCTCGTGAACTTCGCCTTTAACCACTTCATCAAAAA
GCGCTTCTTCGCTTGGTGGAAGAAATACAACTATATTCTTGCTGCCGCGC
TGGACACGGGTCTTGCGCTTAGTGGTATAGTTATCTTCTTCTGTATTTCG
TACCCCGGGGCTGTGTTTCCCGATTGGTGGGGAAATACGGTCTATGTCAA
TACGGCGGATGGGGAGGGCGTCGCATATAAGTCTATGCCTGAGGTCGGGT
ATTTCGGGCCAGCGAATGGGACGTGGAGTTGA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_001224KJC3_001224Aspergillus niger KJC3gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001224-T1.exon1KJC3_001224-T1.exon1Aspergillus niger KJC3exon
KJC3_001224-T1.exon2KJC3_001224-T1.exon2Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001224-T1.cdsKJC3_001224-T1.cdsAspergillus niger KJC3CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001224-T1KJC3_001224-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR004648
DBxrefInterPro:IPR004813
DBxrefPFAM:PF03169
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch1supercontigch1:3135751..3138118 +
Powered by Drupal