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KJC3_001225-T1, KJC3_001225-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_001225-T1
Unique NameKJC3_001225-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch1:3138480..3141094-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_001225-T1 ID=KJC3_001225-T1|Name=KJC3_001225-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2615bp|location=Sequence derived from alignment at ch1:3138480..3141094- (Aspergillus niger KJC3)
TGCTTATCTTCTCCATCCCTCTTCCGTTTCCCTTCCTTTCATCCTCCATC
CATCCTCTCTATTCCCAACATTTCCATCAACCCACGTTGCAGCTTTTATC
TCCACACGCTGCAATCTACATCTAGCACGACATTTTTGCTACCTGCCCGT
CGTCCAGATTAATTTGCCAGCTTCTGGACACCGTTACCTCCAGAAACAAC
CCCGTTCCAGCGTCGCGATTCTCCGTGGCGCAACACCTGTAACACTCAAC
ACTCTCGTGAAACCTTCATCAACTACCGACACCCAACTCCTCCACGTTCT
ATACTCCGCTTCTCACTATGTCTGCCAAGTTGGACAAGTCTCTCGACGAG
ATCCTCGTCAGCCGTCGCCAGGGCGCTCGCCGTCGCGCTCGCCGCTCGGC
TCCCAACAAGGCTGCCAACGCTCCTGTCCCAGTCGGAGGTGTGAAGAAGA
CCACCAAGGCTGCCAAGGCGCCCGGAAAGGCTGTTCAGAATGGACACCCG
GTCTCTACGGAGAGCAAAATCATGGTCAGCGGCTTGGTGAGTACCCGTTA
TCTCTGCTCTATTGATAAATGAACCGTTACTAACGTTTTTAGCCTTCCGA
TGTGAATGAGGCCAATATCAAGGTATGTTGATCGAAAGGCCTTGGCCTTG
GGTTTCTATCGCCATGTTTTCTTCTCGAAACCTTCGAGGCGCAACGGCTT
TCGCGCGCGTTTCGATCCTTGCCACGTTATCTATATATATTTTATATCAC
CGTCATGGATTCTTGGTCTTCAGCATAGGCAGCAAACTCCATTGAAATCT
TCGCATGCGGTAATTGCACGCTGGCACCCTGCGAGTCCGCCGAAGTTGGA
GTTCTGCCGTAGTCTTGCGAAAGGCGTGTTAGCTCGGGCGGATCTTCCAG
CCATCCGCCTTTGAAGCCACGCAGCAGACTGTGCCACAGATGATTGTTGA
AACATACCATCTTTGAAACCAATCCGATTGGCTACACCCGTACAAAGTCC
CACGTTTCGAGGTGTCGGGCATCAGCGAGCGCATCAGCCTACCAGCAGTG
ACCGACTAGTTCGGCAGGTGATCAACTGTCAAGCATCATGCTACCGGCGG
TCGGTATGGGAAATGTTTCAGTGTCGGGCAGGAAAGACGCATCTTCCCAT
ATCACCTCCGTGAGACAAATCGTGTCTTGTTCTCCCTATCATGGGCTGCT
AGAGAGGTTCTAGGGAAACAGAACCATGGATTTGCCGCACACGTAGTCTT
CGTGTTGTCTGTCCCCGGGCGAAGGTTGCTGGCACACACAGCCCGTAGCT
TTTGAGGCTAGCGCCTTGTCTGGTTGCGAAAAGGTCGATGACGATTGCTG
AGTGGGTTAGTTGGAAGGGGGACACACGATACTGTGAAGGCTTTTGAGGG
AGTTCATCGTTGTGGTTCTTGGGATAAATGCTAGCAGCTCTGTGCTCTAG
ATATGACAGTGTCTCGGTGTTCTGGAATGAACCGCCATGCACTGATTACT
ACTAACCGCCGCTGTGTGCTCGCTGGTGCTCTTTGGTATCGCGTTTGAAG
CCGGTGTCACGCGTTCTTCGATGTTTTGGCTCTTCGGAATTCCTTGCGCC
TTCTGCATTCTGTTGGCTCGACATACTAATTTGGTCTCCTGGTATAGGAA
TACTTCACAAAGTCAGCAGGTCCTGTCAAGCGAGTCATGCTCACCTACAA
CCAAAACGGCACGAGCCGTGGTATCGCCTCGATCGTGTTCAGCAAGCCCG
ATACAGCTGCCAAGGCTGCTAAGGACTTGAATGGACTCCTTGTTGATGGC
AGACCCATGAAGGTGAGCTTTTCACTAACCAATCACTATTCTTACGTATG
GACACTAACAAATACTAGATTGAGGTTGTCGTCGACGCCTCCCACGCTCC
TGAGGTCTCTGCCCCTAAGCCTCTGGGCGAGCGCGTTGCGTAAGTGTCCT
CTTCCATTGTCTTGTACTGGGGAATCATGACTAACCGCGATGAAGACAAA
CCAAGCCCCAACCGAAGCCCGCTACCGCTACCAAGGCTGCTGCTGGTGCC
AAGGGCCGCAAGGGCCGTGCTCGTCGCCCTAACGGCCGTGGTAACCGCCC
TAAGCCCAAGACTGTGGAGGAGCTTGATGCTGAGATGGTTGACTACTTCT
CTACCACTAACGAGAATGCTGGCCCTGCGGAGGGCAATGCCCAAGCAAAC
GGTGCTGCCCCCCAGCAGCCTGCCGCTACCGGCGGCGAAGACCTCGGAAT
GGCGGAGATCTCCGTAAGTTTTGTCAACGAGTTGTTGTGCGAACCAGAGC
TAATAAACTATTTAGTAAATGTCCCATCTTACGTTTGACTCTACACGACC
GCGTGAGTCAATTGTATCGACTGCGAAGGGCCAGGCTTTGACCGGCCACT
CGGCCAATCTTTACGCACTCTGGGTCTGCCGGTTGGATTCGAGTTTCAAG
CTTTCGTTATTTCATCATTGCTCTTCGGATATGTCTTTCTAGTGTGCCCG
GTTCCTTTTTTCTTTTTTCTCTCATAATGTTGTCAGTGCTACTCGGATAT
CGTTGGTGGGATGGGGAAAGCCATGTAACTAATATACTTGCTCAATCAAA
AACGGCAAGCACATG
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Coding sequence (CDS) from alignment at ch1:3138480..3141094-

>KJC3_001225-T1 ID=KJC3_001225-T1|Name=KJC3_001225-T1|organism=Aspergillus niger KJC3|type=CDS|length=4536bp|location=Sequence derived from alignment at ch1:3138480..3141094- (Aspergillus niger KJC3)
TAAACAAACCAAGCCCCAACCGAAGCCCGCTACCGCTACCAAGGCTGCTG
CTGGTGCCAAGGGCCGCAAGGGCCGTGCTCGTCGCCCTAACGGCCGTGGT
AACCGCCCTAAGCCCAAGACTGTGGAGGAGCTTGATGCTGAGATGGTTGA
CTACTTCTCTACCACTAACGAGAATGCTGGCCCTGCGGAGGGCAATGCCC
AAGCAAACGGTGCTGCCCCCCAGCAGCCTGCCGCTACCGGCGGCGAAGAC
CTCGGAATGGCGGAGATCTCCATTGAGGTTGTCGTCGACGCCTCCCACGC
TCCTGAGGTCTCTGCCCCTAAGCCTCTGGGCGAGCGCGTTGCGAATACTT
CACAAAGTCAGCAGGTCCTGTCAAGCGAGTCATGCTCACCTACAACCAAA
ACGGCACGAGCCGTGGTATCGCCTCGATCGTGTTCAGCAAGCCCGATACA
GCTGCCAAGGCTGCTAAGGACTTGAATGGACTCCTTGTTGATGGCAGACC
CATGAAGCCTTCCGATGTGAATGAGGCCAATATCAAGATGTCTGCCAAGT
TGGACAAGTCTCTCGACGAGATCCTCGTCAGCCGTCGCCAGGGCGCTCGC
CGTCGCGCTCGCCGCTCGGCTCCCAACAAGGCTGCCAACGCTCCTGTCCC
AGTCGGAGGTGTGAAGAAGACCACCAAGGCTGCCAAGGCGCCCGGAAAGG
CTGTTCAGAATGGACACCCGGTCTCTACGGAGAGCAAAATCATGGTCAGC
GGCTTGTAAACAAACCAAGCCCCAACCGAAGCCCGCTACCGCTACCAAGG
CTGCTGCTGGTGCCAAGGGCCGCAAGGGCCGTGCTCGTCGCCCTAACGGC
CGTGGTAACCGCCCTAAGCCCAAGACTGTGGAGGAGCTTGATGCTGAGAT
GGTTGACTACTTCTCTACCACTAACGAGAATGCTGGCCCTGCGGAGGGCA
ATGCCCAAGCAAACGGTGCTGCCCCCCAGCAGCCTGCCGCTACCGGCGGC
GAAGACCTCGGAATGGCGGAGATCTCCATTGAGGTTGTCGTCGACGCCTC
CCACGCTCCTGAGGTCTCTGCCCCTAAGCCTCTGGGCGAGCGCGTTGCGA
ATACTTCACAAAGTCAGCAGGTCCTGTCAAGCGAGTCATGCTCACCTACA
ACCAAAACGGCACGAGCCGTGGTATCGCCTCGATCGTGTTCAGCAAGCCC
GATACAGCTGCCAAGGCTGCTAAGGACTTGAATGGACTCCTTGTTGATGG
CAGACCCATGAAGCCTTCCGATGTGAATGAGGCCAATATCAAGATGTCTG
CCAAGTTGGACAAGTCTCTCGACGAGATCCTCGTCAGCCGTCGCCAGGGC
GCTCGCCGTCGCGCTCGCCGCTCGGCTCCCAACAAGGCTGCCAACGCTCC
TGTCCCAGTCGGAGGTGTGAAGAAGACCACCAAGGCTGCCAAGGCGCCCG
GAAAGGCTGTTCAGAATGGACACCCGGTCTCTACGGAGAGCAAAATCATG
GTCAGCGGCTTGTAAACAAACCAAGCCCCAACCGAAGCCCGCTACCGCTA
CCAAGGCTGCTGCTGGTGCCAAGGGCCGCAAGGGCCGTGCTCGTCGCCCT
AACGGCCGTGGTAACCGCCCTAAGCCCAAGACTGTGGAGGAGCTTGATGC
TGAGATGGTTGACTACTTCTCTACCACTAACGAGAATGCTGGCCCTGCGG
AGGGCAATGCCCAAGCAAACGGTGCTGCCCCCCAGCAGCCTGCCGCTACC
GGCGGCGAAGACCTCGGAATGGCGGAGATCTCCATTGAGGTTGTCGTCGA
CGCCTCCCACGCTCCTGAGGTCTCTGCCCCTAAGCCTCTGGGCGAGCGCG
TTGCGAATACTTCACAAAGTCAGCAGGTCCTGTCAAGCGAGTCATGCTCA
CCTACAACCAAAACGGCACGAGCCGTGGTATCGCCTCGATCGTGTTCAGC
AAGCCCGATACAGCTGCCAAGGCTGCTAAGGACTTGAATGGACTCCTTGT
TGATGGCAGACCCATGAAGCCTTCCGATGTGAATGAGGCCAATATCAAGA
TGTCTGCCAAGTTGGACAAGTCTCTCGACGAGATCCTCGTCAGCCGTCGC
CAGGGCGCTCGCCGTCGCGCTCGCCGCTCGGCTCCCAACAAGGCTGCCAA
CGCTCCTGTCCCAGTCGGAGGTGTGAAGAAGACCACCAAGGCTGCCAAGG
CGCCCGGAAAGGCTGTTCAGAATGGACACCCGGTCTCTACGGAGAGCAAA
ATCATGGTCAGCGGCTTGTAAACAAACCAAGCCCCAACCGAAGCCCGCTA
CCGCTACCAAGGCTGCTGCTGGTGCCAAGGGCCGCAAGGGCCGTGCTCGT
CGCCCTAACGGCCGTGGTAACCGCCCTAAGCCCAAGACTGTGGAGGAGCT
TGATGCTGAGATGGTTGACTACTTCTCTACCACTAACGAGAATGCTGGCC
CTGCGGAGGGCAATGCCCAAGCAAACGGTGCTGCCCCCCAGCAGCCTGCC
GCTACCGGCGGCGAAGACCTCGGAATGGCGGAGATCTCCATTGAGGTTGT
CGTCGACGCCTCCCACGCTCCTGAGGTCTCTGCCCCTAAGCCTCTGGGCG
AGCGCGTTGCGAATACTTCACAAAGTCAGCAGGTCCTGTCAAGCGAGTCA
TGCTCACCTACAACCAAAACGGCACGAGCCGTGGTATCGCCTCGATCGTG
TTCAGCAAGCCCGATACAGCTGCCAAGGCTGCTAAGGACTTGAATGGACT
CCTTGTTGATGGCAGACCCATGAAGCCTTCCGATGTGAATGAGGCCAATA
TCAAGATGTCTGCCAAGTTGGACAAGTCTCTCGACGAGATCCTCGTCAGC
CGTCGCCAGGGCGCTCGCCGTCGCGCTCGCCGCTCGGCTCCCAACAAGGC
TGCCAACGCTCCTGTCCCAGTCGGAGGTGTGAAGAAGACCACCAAGGCTG
CCAAGGCGCCCGGAAAGGCTGTTCAGAATGGACACCCGGTCTCTACGGAG
AGCAAAATCATGGTCAGCGGCTTGTAAACAAACCAAGCCCCAACCGAAGC
CCGCTACCGCTACCAAGGCTGCTGCTGGTGCCAAGGGCCGCAAGGGCCGT
GCTCGTCGCCCTAACGGCCGTGGTAACCGCCCTAAGCCCAAGACTGTGGA
GGAGCTTGATGCTGAGATGGTTGACTACTTCTCTACCACTAACGAGAATG
CTGGCCCTGCGGAGGGCAATGCCCAAGCAAACGGTGCTGCCCCCCAGCAG
CCTGCCGCTACCGGCGGCGAAGACCTCGGAATGGCGGAGATCTCCATTGA
GGTTGTCGTCGACGCCTCCCACGCTCCTGAGGTCTCTGCCCCTAAGCCTC
TGGGCGAGCGCGTTGCGAATACTTCACAAAGTCAGCAGGTCCTGTCAAGC
GAGTCATGCTCACCTACAACCAAAACGGCACGAGCCGTGGTATCGCCTCG
ATCGTGTTCAGCAAGCCCGATACAGCTGCCAAGGCTGCTAAGGACTTGAA
TGGACTCCTTGTTGATGGCAGACCCATGAAGCCTTCCGATGTGAATGAGG
CCAATATCAAGATGTCTGCCAAGTTGGACAAGTCTCTCGACGAGATCCTC
GTCAGCCGTCGCCAGGGCGCTCGCCGTCGCGCTCGCCGCTCGGCTCCCAA
CAAGGCTGCCAACGCTCCTGTCCCAGTCGGAGGTGTGAAGAAGACCACCA
AGGCTGCCAAGGCGCCCGGAAAGGCTGTTCAGAATGGACACCCGGTCTCT
ACGGAGAGCAAAATCATGGTCAGCGGCTTGTAAACAAACCAAGCCCCAAC
CGAAGCCCGCTACCGCTACCAAGGCTGCTGCTGGTGCCAAGGGCCGCAAG
GGCCGTGCTCGTCGCCCTAACGGCCGTGGTAACCGCCCTAAGCCCAAGAC
TGTGGAGGAGCTTGATGCTGAGATGGTTGACTACTTCTCTACCACTAACG
AGAATGCTGGCCCTGCGGAGGGCAATGCCCAAGCAAACGGTGCTGCCCCC
CAGCAGCCTGCCGCTACCGGCGGCGAAGACCTCGGAATGGCGGAGATCTC
CATTGAGGTTGTCGTCGACGCCTCCCACGCTCCTGAGGTCTCTGCCCCTA
AGCCTCTGGGCGAGCGCGTTGCGAATACTTCACAAAGTCAGCAGGTCCTG
TCAAGCGAGTCATGCTCACCTACAACCAAAACGGCACGAGCCGTGGTATC
GCCTCGATCGTGTTCAGCAAGCCCGATACAGCTGCCAAGGCTGCTAAGGA
CTTGAATGGACTCCTTGTTGATGGCAGACCCATGAAGCCTTCCGATGTGA
ATGAGGCCAATATCAAGATGTCTGCCAAGTTGGACAAGTCTCTCGACGAG
ATCCTCGTCAGCCGTCGCCAGGGCGCTCGCCGTCGCGCTCGCCGCTCGGC
TCCCAACAAGGCTGCCAACGCTCCTGTCCCAGTCGGAGGTGTGAAGAAGA
CCACCAAGGCTGCCAAGGCGCCCGGAAAGGCTGTTCAGAATGGACACCCG
GTCTCTACGGAGAGCAAAATCATGGTCAGCGGCTTG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_001225KJC3_001225Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001225-T1KJC3_001225-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001225-T1.cdsKJC3_001225-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001225-T1.utr3p1KJC3_001225-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001225-T1.exon6KJC3_001225-T1.exon6Aspergillus niger KJC3exon
KJC3_001225-T1.exon5KJC3_001225-T1.exon5Aspergillus niger KJC3exon
KJC3_001225-T1.exon4KJC3_001225-T1.exon4Aspergillus niger KJC3exon
KJC3_001225-T1.exon3KJC3_001225-T1.exon3Aspergillus niger KJC3exon
KJC3_001225-T1.exon2KJC3_001225-T1.exon2Aspergillus niger KJC3exon
KJC3_001225-T1.exon1KJC3_001225-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001225-T1.utr5p1KJC3_001225-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR035979
DBxrefInterPro:IPR012677
DBxrefInterPro:IPR025715
DBxrefInterPro:IPR000504
DBxrefPFAM:PF00076
DBxrefPFAM:PF13865
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch1supercontigch1:3138480..3141094 -
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