|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at ch1:3147161..3148862+ Legend: five_prime_UTRexonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_001229-T1 ID=KJC3_001229-T1|Name=KJC3_001229-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1702bp|location=Sequence derived from alignment at ch1:3147161..3148862+ (Aspergillus niger KJC3)
CACCATCCCTTTCTTCCCGATCGAACTATCCAGGAACGCCCGCCCATCCT
CTCCCTCCGCGGATCTCACTATTCCCTCCTCATTCCCGAAGTCTCTTATC
CCTCTCCACCATGGCGCACCCCAGTCCCCTCGACAAACTGAATACATAAG
GTTAAGACGATGGCAGCTCAACAGTACCGCCACAGTCCCCTCGTTCCCAG
TGGTCCCATCCCCACGCCGCCATGACCCAGTCCTTCGTCTCCTTCACCGC
CGTCCTGTTGACGGGATTGCTGTCGCATTCCCAGCCTGCCGCGGCGGTGG
GAATCAGCTGCGATCCAAACACCCGTCCATACTCGGCCTGGATGACAGAT
AGCGTCATTGCCCGACGAGATGCCATTCTAGGTGACTTTGCAGCAGGAGA
TGATATCTACCCGAATATCTCTCGGATCGGGCTGTTTGAGTCAACCGTCA
TCCGGTTGAAGGATTACTACGATGCCGATTCTTGCGGCCAGGTGGATTGG
CACAGTTACACGCTGCAGGGCGCGGAAAGCCTTCTTCCGGCAGTGTTGAA
TGTTTCGTTTGATGTGAATGCTCCGCTCACTGTGTTTGCGGCGGGAGATC
CTATGTATCACCAGTAAGTCATTCAATCTCACCACTTAACTGGCTGGCCT
CAGGGACAATCAAACCGACATCTATATTGTTAGATACGATCGCGCGCCAA
ATGAGACCTACAAACAAGCCCTTGATACCCTTCACGATGCCTTTAACGCA
AGAACCCGCGACTCAGAAGGTCGGACAACACCCGCGTCAATACCAACAAC
TCAATCCCATACTCAAAATCCGAAGCATACTAATTATATGAATATCCAGG
CGCCTTCTGGTACTTCAACCCCTACCCCAACTGGGGCGTCCTTGAGGGCC
TCTACCCTCTCGGCTCCTTCATCTCCATGTGGAAAACCTACTTCGAGCCC
ACTAACACCACCCTATCCGACTCCCTAATGCTCAGCCTCGATCTATTCAA
AGACCACTGCCACGACGACTCCAGCGGCCTCCTCTTCCACGGCTACGACT
CCAGCAAGACCGCCTCCTGGGCCGACCCCACCACCGGCGCGAGTTCCTAC
GTCTGGAACCGCGCTCTCGGAAACTGGTTCATGACGCTGGTGGATCTACT
TGAACGATCAGGCAAAAACAGCGCGATTCTCAACGAGACGCAGCGCGACG
ACGTCTACACGAAATACTGGAATGTCGCTAACACGATCATCAACGACGCT
GATGAGGAAACTGGATGCTGGTGGCAGGTTATGTTGCATGGTGGGGAAGA
GGGCAACTATATCGAGTCTAGTGGATCAGCTCAGTTTGTGTATGGATTGT
TGAAAGGTGCCAGATTGGGCTATTTGCAGGGGAAGACACCCAATGGAGTG
GGATATACTGATGCGGCCGATAAGTGCTATAACTATCTGGTGAGCGAGTT
TGTCAAGGAGGAGGCGGATGGCTCGTTGGGGTACAATGGGACTGTTGGGG
ATTGTGGATTGTATGATCCGACCTTTGAGGTATGAATTTCTTCTTCTTCC
ATTCTTTTGTGATTCGGCTGAATGCTAACGCAATTGTATTCTCAAAGTAC
TACACCACCAGACCCATCGAATACAACAACCTCTTCGGCACTTCGTCTTT
CATCCTGGCAAGCTGGGAACATGAGATGTTTGAGACGGGGTATTATGATT
AG back to topCoding sequence (CDS) from alignment at ch1:3147161..3148862+ >KJC3_001229-T1 ID=KJC3_001229-T1|Name=KJC3_001229-T1|organism=Aspergillus niger KJC3|type=CDS|length=5052bp|location=Sequence derived from alignment at ch1:3147161..3148862+ (Aspergillus niger KJC3)
ATGACCCAGTCCTTCGTCTCCTTCACCGCCGTCCTGTTGACGGGATTGCT
GTCGCATTCCCAGCCTGCCGCGGCGGTGGGAATCAGCTGCGATCCAAACA
CCCGTCCATACTCGGCCTGGATGACAGATAGCGTCATTGCCCGACGAGAT
GCCATTCTAGGTGACTTTGCAGCAGGAGATGATATCTACCCGAATATCTC
TCGGATCGGGCTGTTTGAGTCAACCGTCATCCGGTTGAAGGATTACTACG
ATGCCGATTCTTGCGGCCAGGTGGATTGGCACAGTTACACGCTGCAGGGC
GCGGAAAGCCTTCTTCCGGCAGTGTTGAATGTTTCGTTTGATGTGAATGC
TCCGCTCACTGTGTTTGCGGCGGGAGATCCTATGTATCACCAATACGATC
GCGCGCCAAATGAGACCTACAAACAAGCCCTTGATACCCTTCACGATGCC
TTTAACGCAAGAACCCGCGACTCAGAAGGCGCCTTCTGGTACTTCAACCC
CTACCCCAACTGGGGCGTCCTTGAGGGCCTCTACCCTCTCGGCTCCTTCA
TCTCCATGTGGAAAACCTACTTCGAGCCCACTAACACCACCCTATCCGAC
TCCCTAATGCTCAGCCTCGATCTATTCAAAGACCACTGCCACGACGACTC
CAGCGGCCTCCTCTTCCACGGCTACGACTCCAGCAAGACCGCCTCCTGGG
CCGACCCCACCACCGGCGCGAGTTCCTACGTCTGGAACCGCGCTCTCGGA
AACTGGTTCATGACGCTGGTGGATCTACTTGAACGATCAGGCAAAAACAG
CGCGATTCTCAACGAGACGCAGCGCGACGACGTCTACACGAAATACTGGA
ATGTCGCTAACACGATCATCAACGACGCTGATGAGGAAACTGGATGCTGG
TGGCAGGTTATGTTGCATGGTGGGGAAGAGGGCAACTATATCGAGTCTAG
TGGATCAGCTCAGTTTGTGTATGGATTGTTGAAAGGTGCCAGATTGGGCT
ATTTGCAGGGGAAGACACCCAATGGAGTGGGATATACTGATGCGGCCGAT
AAGTGCTATAACTATCTGGTGAGCGAGTTTGTCAAGGAGGAGGCGGATGG
CTCGTTGGGGTACAATGGGACTGTTGGGGATTGTGGATTGTATGATCCGA
CCTTTGAGTACTACACCACCAGACCCATCGAATACAACAACCTCTTCGGC
ACTTCGTCTTTCATCCTGGCAAGCTGGGAACATGAGATGTTTGAGACGGG
GTATTATGATTAGATGACCCAGTCCTTCGTCTCCTTCACCGCCGTCCTGT
TGACGGGATTGCTGTCGCATTCCCAGCCTGCCGCGGCGGTGGGAATCAGC
TGCGATCCAAACACCCGTCCATACTCGGCCTGGATGACAGATAGCGTCAT
TGCCCGACGAGATGCCATTCTAGGTGACTTTGCAGCAGGAGATGATATCT
ACCCGAATATCTCTCGGATCGGGCTGTTTGAGTCAACCGTCATCCGGTTG
AAGGATTACTACGATGCCGATTCTTGCGGCCAGGTGGATTGGCACAGTTA
CACGCTGCAGGGCGCGGAAAGCCTTCTTCCGGCAGTGTTGAATGTTTCGT
TTGATGTGAATGCTCCGCTCACTGTGTTTGCGGCGGGAGATCCTATGTAT
CACCAATACGATCGCGCGCCAAATGAGACCTACAAACAAGCCCTTGATAC
CCTTCACGATGCCTTTAACGCAAGAACCCGCGACTCAGAAGGCGCCTTCT
GGTACTTCAACCCCTACCCCAACTGGGGCGTCCTTGAGGGCCTCTACCCT
CTCGGCTCCTTCATCTCCATGTGGAAAACCTACTTCGAGCCCACTAACAC
CACCCTATCCGACTCCCTAATGCTCAGCCTCGATCTATTCAAAGACCACT
GCCACGACGACTCCAGCGGCCTCCTCTTCCACGGCTACGACTCCAGCAAG
ACCGCCTCCTGGGCCGACCCCACCACCGGCGCGAGTTCCTACGTCTGGAA
CCGCGCTCTCGGAAACTGGTTCATGACGCTGGTGGATCTACTTGAACGAT
CAGGCAAAAACAGCGCGATTCTCAACGAGACGCAGCGCGACGACGTCTAC
ACGAAATACTGGAATGTCGCTAACACGATCATCAACGACGCTGATGAGGA
AACTGGATGCTGGTGGCAGGTTATGTTGCATGGTGGGGAAGAGGGCAACT
ATATCGAGTCTAGTGGATCAGCTCAGTTTGTGTATGGATTGTTGAAAGGT
GCCAGATTGGGCTATTTGCAGGGGAAGACACCCAATGGAGTGGGATATAC
TGATGCGGCCGATAAGTGCTATAACTATCTGGTGAGCGAGTTTGTCAAGG
AGGAGGCGGATGGCTCGTTGGGGTACAATGGGACTGTTGGGGATTGTGGA
TTGTATGATCCGACCTTTGAGTACTACACCACCAGACCCATCGAATACAA
CAACCTCTTCGGCACTTCGTCTTTCATCCTGGCAAGCTGGGAACATGAGA
TGTTTGAGACGGGGTATTATGATTAGATGACCCAGTCCTTCGTCTCCTTC
ACCGCCGTCCTGTTGACGGGATTGCTGTCGCATTCCCAGCCTGCCGCGGC
GGTGGGAATCAGCTGCGATCCAAACACCCGTCCATACTCGGCCTGGATGA
CAGATAGCGTCATTGCCCGACGAGATGCCATTCTAGGTGACTTTGCAGCA
GGAGATGATATCTACCCGAATATCTCTCGGATCGGGCTGTTTGAGTCAAC
CGTCATCCGGTTGAAGGATTACTACGATGCCGATTCTTGCGGCCAGGTGG
ATTGGCACAGTTACACGCTGCAGGGCGCGGAAAGCCTTCTTCCGGCAGTG
TTGAATGTTTCGTTTGATGTGAATGCTCCGCTCACTGTGTTTGCGGCGGG
AGATCCTATGTATCACCAATACGATCGCGCGCCAAATGAGACCTACAAAC
AAGCCCTTGATACCCTTCACGATGCCTTTAACGCAAGAACCCGCGACTCA
GAAGGCGCCTTCTGGTACTTCAACCCCTACCCCAACTGGGGCGTCCTTGA
GGGCCTCTACCCTCTCGGCTCCTTCATCTCCATGTGGAAAACCTACTTCG
AGCCCACTAACACCACCCTATCCGACTCCCTAATGCTCAGCCTCGATCTA
TTCAAAGACCACTGCCACGACGACTCCAGCGGCCTCCTCTTCCACGGCTA
CGACTCCAGCAAGACCGCCTCCTGGGCCGACCCCACCACCGGCGCGAGTT
CCTACGTCTGGAACCGCGCTCTCGGAAACTGGTTCATGACGCTGGTGGAT
CTACTTGAACGATCAGGCAAAAACAGCGCGATTCTCAACGAGACGCAGCG
CGACGACGTCTACACGAAATACTGGAATGTCGCTAACACGATCATCAACG
ACGCTGATGAGGAAACTGGATGCTGGTGGCAGGTTATGTTGCATGGTGGG
GAAGAGGGCAACTATATCGAGTCTAGTGGATCAGCTCAGTTTGTGTATGG
ATTGTTGAAAGGTGCCAGATTGGGCTATTTGCAGGGGAAGACACCCAATG
GAGTGGGATATACTGATGCGGCCGATAAGTGCTATAACTATCTGGTGAGC
GAGTTTGTCAAGGAGGAGGCGGATGGCTCGTTGGGGTACAATGGGACTGT
TGGGGATTGTGGATTGTATGATCCGACCTTTGAGTACTACACCACCAGAC
CCATCGAATACAACAACCTCTTCGGCACTTCGTCTTTCATCCTGGCAAGC
TGGGAACATGAGATGTTTGAGACGGGGTATTATGATTAGATGACCCAGTC
CTTCGTCTCCTTCACCGCCGTCCTGTTGACGGGATTGCTGTCGCATTCCC
AGCCTGCCGCGGCGGTGGGAATCAGCTGCGATCCAAACACCCGTCCATAC
TCGGCCTGGATGACAGATAGCGTCATTGCCCGACGAGATGCCATTCTAGG
TGACTTTGCAGCAGGAGATGATATCTACCCGAATATCTCTCGGATCGGGC
TGTTTGAGTCAACCGTCATCCGGTTGAAGGATTACTACGATGCCGATTCT
TGCGGCCAGGTGGATTGGCACAGTTACACGCTGCAGGGCGCGGAAAGCCT
TCTTCCGGCAGTGTTGAATGTTTCGTTTGATGTGAATGCTCCGCTCACTG
TGTTTGCGGCGGGAGATCCTATGTATCACCAATACGATCGCGCGCCAAAT
GAGACCTACAAACAAGCCCTTGATACCCTTCACGATGCCTTTAACGCAAG
AACCCGCGACTCAGAAGGCGCCTTCTGGTACTTCAACCCCTACCCCAACT
GGGGCGTCCTTGAGGGCCTCTACCCTCTCGGCTCCTTCATCTCCATGTGG
AAAACCTACTTCGAGCCCACTAACACCACCCTATCCGACTCCCTAATGCT
CAGCCTCGATCTATTCAAAGACCACTGCCACGACGACTCCAGCGGCCTCC
TCTTCCACGGCTACGACTCCAGCAAGACCGCCTCCTGGGCCGACCCCACC
ACCGGCGCGAGTTCCTACGTCTGGAACCGCGCTCTCGGAAACTGGTTCAT
GACGCTGGTGGATCTACTTGAACGATCAGGCAAAAACAGCGCGATTCTCA
ACGAGACGCAGCGCGACGACGTCTACACGAAATACTGGAATGTCGCTAAC
ACGATCATCAACGACGCTGATGAGGAAACTGGATGCTGGTGGCAGGTTAT
GTTGCATGGTGGGGAAGAGGGCAACTATATCGAGTCTAGTGGATCAGCTC
AGTTTGTGTATGGATTGTTGAAAGGTGCCAGATTGGGCTATTTGCAGGGG
AAGACACCCAATGGAGTGGGATATACTGATGCGGCCGATAAGTGCTATAA
CTATCTGGTGAGCGAGTTTGTCAAGGAGGAGGCGGATGGCTCGTTGGGGT
ACAATGGGACTGTTGGGGATTGTGGATTGTATGATCCGACCTTTGAGTAC
TACACCACCAGACCCATCGAATACAACAACCTCTTCGGCACTTCGTCTTT
CATCCTGGCAAGCTGGGAACATGAGATGTTTGAGACGGGGTATTATGATT
AG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003824 | catalytic activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_001229-T1.utr5p1 | KJC3_001229-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | SECRETED:SignalP(1-25) |
| Note | CAZy:GH105 |
| DBxref | InterPro:IPR008928 |
| DBxref | InterPro:IPR012341 |
| DBxref | InterPro:IPR010905 |
| DBxref | PFAM:PF07470 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch1 | supercontig | ch1:3147161..3148862 + |
|
