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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch1:3149497..3151377- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_001230-T1 ID=KJC3_001230-T1|Name=KJC3_001230-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1881bp|location=Sequence derived from alignment at ch1:3149497..3151377- (Aspergillus niger KJC3) CAATGCTGTCTCCCGCCTGAACTGTAAATCTTCACATTGTCTACTCACAG
ACTGGACGACGCGAACAAGCAAGCAAACACAATGGCTCCTTGGATCCTCG
GCGAGAAGTTCAACACCGTTTACCCCCACAAGGGCTCTATCAAAGCTCTC
TGGGAAACGAAGTGGAAGTTTGCAGTAAGTTTTCACTGGTGGTCGGCATC
ACCACCCCTTGCTCAGTGGTTGGCCAACCGCTCAGCCAGGTCTTATCTAA
CGTAGCATGCAGTGTGAAAAATCAGTCTATCCGTTTCACGACGGTGCCAT
CGAAGACTTTCGACCTATCTTCCAAAAGCTTATCGATGTAGGTTATCATA
ATCTTGCCATGTGCGCCTTACGAGCGCAAGGGTAAAATACTCACTTCTAG
ATAGGAAAATATCAACGATGCCTACACCGATGCCTACACGCAGGCTTTCT
TCCCGGTTGCTGAGGCACTCGAAAATAAGGCGTCAGCTGCTTTGAACAAC
AACAATGTGGAGATGGCATCTGACTTGCTCCGAAGAGCTGCTGTGGTCTA
CCGTATCTCCCGCTTCCCATATGTCGACCCGACCAGAGAAGACATCAAAA
AAGAGGCCTTCAACCGCCAGAAGAAGGTCTATCTGAAGGCAGCATCCTTC
TGGAAGCCCACCATCCAGGAGGTCATCATCCCGCACAAGCATAAGTCGGC
CACCGACGGAGCCTATGTTCCCCTTTTTGTTCGTGTCCCGGAACATGCGA
CGGCGGAGAACCCCGTCCCAGTTGTAGTTCTAATGACTGGTCTGGATGGA
TACCGTCCCGACAACAGTCAGCGTACGCATGAGATCATCAACCGGGGTTG
GGCAACAGTTATCTGTGAGATCCCCGGTACCGCGGACTCGCCTGCCGATC
CCAGCGACCCCGAATCGGCGGACCGTCAGTGGACTACCGTTCTCGACTAC
ATGGCGACTCGTCCGGAGTTCGACATGTCCCGGGTTGCTGCCTGGGGTCT
AAGTGCTGGTGGGTTCTACGCCATCCGGGCTGCACATACCCACCGTGATC
GCTTCGTGGGAACTCTCGCCCACGGACCGGGCTGCCATTACTTCCTGGAC
CCCGAGTGGTTGAGCCGTGTTGATGACCACGAGTACCCATTCCTGTAAGT
ACTGTGACCACGTGTGTCATTGCTAACGACACTAATGGGACATTTTGTAG
GCTCACCCCTGCCTGGGCCAAGAAGTACGGCTACTCCAACCCGGAGGATT
TCAAGAAGCATGGCCAGAAGAAGTTCTCTCTTCTAGAGACGGGCATCTTG
GATCAGCCTAGCTGCAGACTGTTGCTGCTCAACGTAAGACCGATACAGCC
GCGATCTTCTGTATGATACTGACCCATGCTATGCAGGGTGTGGATGATGG
CGTCACCCCCATCGAAGACTGCTTGATGCTCTTCAATCACGGAAGCCCCA
AAGAGGGAAGGTCAGTCAGCTCCCTCCAATTCCGCATTTGCCTAGTCCTT
AACCATGATCGCCCCTTAGATTCTTCCATGGACTACCCCACATGGGATAC
CCTCACAGTCTGGTCCCGTCGTACAAGTGGTTCGAGGATGTTCTGCGCTC
GCCCCAAGAGCCTCTCAAGAACTGAAAAGGATGGTTATTATCGGTGCGCC
GTACATATATAAATAGATATTTATGTGAACGGCCAATTTCAACAGAATGA
TCGACAATGATGAAAGTGATGACTGCAATGAGATGAGAACATGGGATATC
TCTTACTTGGTCCGCACAATCTTAACATATCACTTTAGTGCTAAGCCAGA
TTTTGACTGACTCTCTGCCTGTCTGCGTAATTGCAATGTCTTGACCGGAA
TTTTTTTATTGTTTCCTTGAACATCCCATAG back to topCoding sequence (CDS) from alignment at ch1:3149497..3151377- >KJC3_001230-T1 ID=KJC3_001230-T1|Name=KJC3_001230-T1|organism=Aspergillus niger KJC3|type=CDS|length=7326bp|location=Sequence derived from alignment at ch1:3149497..3151377- (Aspergillus niger KJC3) ATTCTTCCATGGACTACCCCACATGGGATACCCTCACAGTCTGGTCCCGT CGTACAAGTGGTTCGAGGATGTTCTGCGCTCGCCCCAAGAGCCTCTCAAG AACTGAGGTGTGGATGATGGCGTCACCCCCATCGAAGACTGCTTGATGCT CTTCAATCACGGAAGCCCCAAAGAGGGAAGGCTCACCCCTGCCTGGGCCA AGAAGTACGGCTACTCCAACCCGGAGGATTTCAAGAAGCATGGCCAGAAG AAGTTCTCTCTTCTAGAGACGGGCATCTTGGATCAGCCTAGCTGCAGACT GTTGCTGCTCAACGAAAATATCAACGATGCCTACACCGATGCCTACACGC AGGCTTTCTTCCCGGTTGCTGAGGCACTCGAAAATAAGGCGTCAGCTGCT TTGAACAACAACAATGTGGAGATGGCATCTGACTTGCTCCGAAGAGCTGC TGTGGTCTACCGTATCTCCCGCTTCCCATATGTCGACCCGACCAGAGAAG ACATCAAAAAAGAGGCCTTCAACCGCCAGAAGAAGGTCTATCTGAAGGCA GCATCCTTCTGGAAGCCCACCATCCAGGAGGTCATCATCCCGCACAAGCA TAAGTCGGCCACCGACGGAGCCTATGTTCCCCTTTTTGTTCGTGTCCCGG AACATGCGACGGCGGAGAACCCCGTCCCAGTTGTAGTTCTAATGACTGGT CTGGATGGATACCGTCCCGACAACAGTCAGCGTACGCATGAGATCATCAA CCGGGGTTGGGCAACAGTTATCTGTGAGATCCCCGGTACCGCGGACTCGC CTGCCGATCCCAGCGACCCCGAATCGGCGGACCGTCAGTGGACTACCGTT CTCGACTACATGGCGACTCGTCCGGAGTTCGACATGTCCCGGGTTGCTGC CTGGGGTCTAAGTGCTGGTGGGTTCTACGCCATCCGGGCTGCACATACCC ACCGTGATCGCTTCGTGGGAACTCTCGCCCACGGACCGGGCTGCCATTAC TTCCTGGACCCCGAGTGGTTGAGCCGTGTTGATGACCACGAGTACCCATT CCTTGTGAAAAATCAGTCTATCCGTTTCACGACGGTGCCATCGAAGACTT TCGACCTATCTTCCAAAAGCTTATCGATATGGCTCCTTGGATCCTCGGCG AGAAGTTCAACACCGTTTACCCCCACAAGGGCTCTATCAAAGCTCTCTGG GAAACGAAGTGGAAGTTTGCAATTCTTCCATGGACTACCCCACATGGGAT ACCCTCACAGTCTGGTCCCGTCGTACAAGTGGTTCGAGGATGTTCTGCGC TCGCCCCAAGAGCCTCTCAAGAACTGAGGTGTGGATGATGGCGTCACCCC CATCGAAGACTGCTTGATGCTCTTCAATCACGGAAGCCCCAAAGAGGGAA GGCTCACCCCTGCCTGGGCCAAGAAGTACGGCTACTCCAACCCGGAGGAT TTCAAGAAGCATGGCCAGAAGAAGTTCTCTCTTCTAGAGACGGGCATCTT GGATCAGCCTAGCTGCAGACTGTTGCTGCTCAACGAAAATATCAACGATG CCTACACCGATGCCTACACGCAGGCTTTCTTCCCGGTTGCTGAGGCACTC GAAAATAAGGCGTCAGCTGCTTTGAACAACAACAATGTGGAGATGGCATC TGACTTGCTCCGAAGAGCTGCTGTGGTCTACCGTATCTCCCGCTTCCCAT ATGTCGACCCGACCAGAGAAGACATCAAAAAAGAGGCCTTCAACCGCCAG AAGAAGGTCTATCTGAAGGCAGCATCCTTCTGGAAGCCCACCATCCAGGA GGTCATCATCCCGCACAAGCATAAGTCGGCCACCGACGGAGCCTATGTTC CCCTTTTTGTTCGTGTCCCGGAACATGCGACGGCGGAGAACCCCGTCCCA GTTGTAGTTCTAATGACTGGTCTGGATGGATACCGTCCCGACAACAGTCA GCGTACGCATGAGATCATCAACCGGGGTTGGGCAACAGTTATCTGTGAGA TCCCCGGTACCGCGGACTCGCCTGCCGATCCCAGCGACCCCGAATCGGCG GACCGTCAGTGGACTACCGTTCTCGACTACATGGCGACTCGTCCGGAGTT CGACATGTCCCGGGTTGCTGCCTGGGGTCTAAGTGCTGGTGGGTTCTACG CCATCCGGGCTGCACATACCCACCGTGATCGCTTCGTGGGAACTCTCGCC CACGGACCGGGCTGCCATTACTTCCTGGACCCCGAGTGGTTGAGCCGTGT TGATGACCACGAGTACCCATTCCTTGTGAAAAATCAGTCTATCCGTTTCA CGACGGTGCCATCGAAGACTTTCGACCTATCTTCCAAAAGCTTATCGATA TGGCTCCTTGGATCCTCGGCGAGAAGTTCAACACCGTTTACCCCCACAAG GGCTCTATCAAAGCTCTCTGGGAAACGAAGTGGAAGTTTGCAATTCTTCC ATGGACTACCCCACATGGGATACCCTCACAGTCTGGTCCCGTCGTACAAG TGGTTCGAGGATGTTCTGCGCTCGCCCCAAGAGCCTCTCAAGAACTGAGG TGTGGATGATGGCGTCACCCCCATCGAAGACTGCTTGATGCTCTTCAATC ACGGAAGCCCCAAAGAGGGAAGGCTCACCCCTGCCTGGGCCAAGAAGTAC GGCTACTCCAACCCGGAGGATTTCAAGAAGCATGGCCAGAAGAAGTTCTC TCTTCTAGAGACGGGCATCTTGGATCAGCCTAGCTGCAGACTGTTGCTGC TCAACGAAAATATCAACGATGCCTACACCGATGCCTACACGCAGGCTTTC TTCCCGGTTGCTGAGGCACTCGAAAATAAGGCGTCAGCTGCTTTGAACAA CAACAATGTGGAGATGGCATCTGACTTGCTCCGAAGAGCTGCTGTGGTCT ACCGTATCTCCCGCTTCCCATATGTCGACCCGACCAGAGAAGACATCAAA AAAGAGGCCTTCAACCGCCAGAAGAAGGTCTATCTGAAGGCAGCATCCTT CTGGAAGCCCACCATCCAGGAGGTCATCATCCCGCACAAGCATAAGTCGG CCACCGACGGAGCCTATGTTCCCCTTTTTGTTCGTGTCCCGGAACATGCG ACGGCGGAGAACCCCGTCCCAGTTGTAGTTCTAATGACTGGTCTGGATGG ATACCGTCCCGACAACAGTCAGCGTACGCATGAGATCATCAACCGGGGTT GGGCAACAGTTATCTGTGAGATCCCCGGTACCGCGGACTCGCCTGCCGAT CCCAGCGACCCCGAATCGGCGGACCGTCAGTGGACTACCGTTCTCGACTA CATGGCGACTCGTCCGGAGTTCGACATGTCCCGGGTTGCTGCCTGGGGTC TAAGTGCTGGTGGGTTCTACGCCATCCGGGCTGCACATACCCACCGTGAT CGCTTCGTGGGAACTCTCGCCCACGGACCGGGCTGCCATTACTTCCTGGA CCCCGAGTGGTTGAGCCGTGTTGATGACCACGAGTACCCATTCCTTGTGA AAAATCAGTCTATCCGTTTCACGACGGTGCCATCGAAGACTTTCGACCTA TCTTCCAAAAGCTTATCGATATGGCTCCTTGGATCCTCGGCGAGAAGTTC AACACCGTTTACCCCCACAAGGGCTCTATCAAAGCTCTCTGGGAAACGAA GTGGAAGTTTGCAATTCTTCCATGGACTACCCCACATGGGATACCCTCAC AGTCTGGTCCCGTCGTACAAGTGGTTCGAGGATGTTCTGCGCTCGCCCCA AGAGCCTCTCAAGAACTGAGGTGTGGATGATGGCGTCACCCCCATCGAAG ACTGCTTGATGCTCTTCAATCACGGAAGCCCCAAAGAGGGAAGGCTCACC CCTGCCTGGGCCAAGAAGTACGGCTACTCCAACCCGGAGGATTTCAAGAA GCATGGCCAGAAGAAGTTCTCTCTTCTAGAGACGGGCATCTTGGATCAGC CTAGCTGCAGACTGTTGCTGCTCAACGAAAATATCAACGATGCCTACACC GATGCCTACACGCAGGCTTTCTTCCCGGTTGCTGAGGCACTCGAAAATAA GGCGTCAGCTGCTTTGAACAACAACAATGTGGAGATGGCATCTGACTTGC TCCGAAGAGCTGCTGTGGTCTACCGTATCTCCCGCTTCCCATATGTCGAC CCGACCAGAGAAGACATCAAAAAAGAGGCCTTCAACCGCCAGAAGAAGGT CTATCTGAAGGCAGCATCCTTCTGGAAGCCCACCATCCAGGAGGTCATCA TCCCGCACAAGCATAAGTCGGCCACCGACGGAGCCTATGTTCCCCTTTTT GTTCGTGTCCCGGAACATGCGACGGCGGAGAACCCCGTCCCAGTTGTAGT TCTAATGACTGGTCTGGATGGATACCGTCCCGACAACAGTCAGCGTACGC ATGAGATCATCAACCGGGGTTGGGCAACAGTTATCTGTGAGATCCCCGGT ACCGCGGACTCGCCTGCCGATCCCAGCGACCCCGAATCGGCGGACCGTCA GTGGACTACCGTTCTCGACTACATGGCGACTCGTCCGGAGTTCGACATGT CCCGGGTTGCTGCCTGGGGTCTAAGTGCTGGTGGGTTCTACGCCATCCGG GCTGCACATACCCACCGTGATCGCTTCGTGGGAACTCTCGCCCACGGACC GGGCTGCCATTACTTCCTGGACCCCGAGTGGTTGAGCCGTGTTGATGACC ACGAGTACCCATTCCTTGTGAAAAATCAGTCTATCCGTTTCACGACGGTG CCATCGAAGACTTTCGACCTATCTTCCAAAAGCTTATCGATATGGCTCCT TGGATCCTCGGCGAGAAGTTCAACACCGTTTACCCCCACAAGGGCTCTAT CAAAGCTCTCTGGGAAACGAAGTGGAAGTTTGCAATTCTTCCATGGACTA CCCCACATGGGATACCCTCACAGTCTGGTCCCGTCGTACAAGTGGTTCGA GGATGTTCTGCGCTCGCCCCAAGAGCCTCTCAAGAACTGAGGTGTGGATG ATGGCGTCACCCCCATCGAAGACTGCTTGATGCTCTTCAATCACGGAAGC CCCAAAGAGGGAAGGCTCACCCCTGCCTGGGCCAAGAAGTACGGCTACTC CAACCCGGAGGATTTCAAGAAGCATGGCCAGAAGAAGTTCTCTCTTCTAG AGACGGGCATCTTGGATCAGCCTAGCTGCAGACTGTTGCTGCTCAACGAA AATATCAACGATGCCTACACCGATGCCTACACGCAGGCTTTCTTCCCGGT TGCTGAGGCACTCGAAAATAAGGCGTCAGCTGCTTTGAACAACAACAATG TGGAGATGGCATCTGACTTGCTCCGAAGAGCTGCTGTGGTCTACCGTATC TCCCGCTTCCCATATGTCGACCCGACCAGAGAAGACATCAAAAAAGAGGC CTTCAACCGCCAGAAGAAGGTCTATCTGAAGGCAGCATCCTTCTGGAAGC CCACCATCCAGGAGGTCATCATCCCGCACAAGCATAAGTCGGCCACCGAC GGAGCCTATGTTCCCCTTTTTGTTCGTGTCCCGGAACATGCGACGGCGGA GAACCCCGTCCCAGTTGTAGTTCTAATGACTGGTCTGGATGGATACCGTC CCGACAACAGTCAGCGTACGCATGAGATCATCAACCGGGGTTGGGCAACA GTTATCTGTGAGATCCCCGGTACCGCGGACTCGCCTGCCGATCCCAGCGA CCCCGAATCGGCGGACCGTCAGTGGACTACCGTTCTCGACTACATGGCGA CTCGTCCGGAGTTCGACATGTCCCGGGTTGCTGCCTGGGGTCTAAGTGCT GGTGGGTTCTACGCCATCCGGGCTGCACATACCCACCGTGATCGCTTCGT GGGAACTCTCGCCCACGGACCGGGCTGCCATTACTTCCTGGACCCCGAGT GGTTGAGCCGTGTTGATGACCACGAGTACCCATTCCTTGTGAAAAATCAG TCTATCCGTTTCACGACGGTGCCATCGAAGACTTTCGACCTATCTTCCAA AAGCTTATCGATATGGCTCCTTGGATCCTCGGCGAGAAGTTCAACACCGT TTACCCCCACAAGGGCTCTATCAAAGCTCTCTGGGAAACGAAGTGGAAGT TTGCAATTCTTCCATGGACTACCCCACATGGGATACCCTCACAGTCTGGT CCCGTCGTACAAGTGGTTCGAGGATGTTCTGCGCTCGCCCCAAGAGCCTC TCAAGAACTGAGGTGTGGATGATGGCGTCACCCCCATCGAAGACTGCTTG ATGCTCTTCAATCACGGAAGCCCCAAAGAGGGAAGGCTCACCCCTGCCTG GGCCAAGAAGTACGGCTACTCCAACCCGGAGGATTTCAAGAAGCATGGCC AGAAGAAGTTCTCTCTTCTAGAGACGGGCATCTTGGATCAGCCTAGCTGC AGACTGTTGCTGCTCAACGAAAATATCAACGATGCCTACACCGATGCCTA CACGCAGGCTTTCTTCCCGGTTGCTGAGGCACTCGAAAATAAGGCGTCAG CTGCTTTGAACAACAACAATGTGGAGATGGCATCTGACTTGCTCCGAAGA GCTGCTGTGGTCTACCGTATCTCCCGCTTCCCATATGTCGACCCGACCAG AGAAGACATCAAAAAAGAGGCCTTCAACCGCCAGAAGAAGGTCTATCTGA AGGCAGCATCCTTCTGGAAGCCCACCATCCAGGAGGTCATCATCCCGCAC AAGCATAAGTCGGCCACCGACGGAGCCTATGTTCCCCTTTTTGTTCGTGT CCCGGAACATGCGACGGCGGAGAACCCCGTCCCAGTTGTAGTTCTAATGA CTGGTCTGGATGGATACCGTCCCGACAACAGTCAGCGTACGCATGAGATC ATCAACCGGGGTTGGGCAACAGTTATCTGTGAGATCCCCGGTACCGCGGA CTCGCCTGCCGATCCCAGCGACCCCGAATCGGCGGACCGTCAGTGGACTA CCGTTCTCGACTACATGGCGACTCGTCCGGAGTTCGACATGTCCCGGGTT GCTGCCTGGGGTCTAAGTGCTGGTGGGTTCTACGCCATCCGGGCTGCACA TACCCACCGTGATCGCTTCGTGGGAACTCTCGCCCACGGACCGGGCTGCC ATTACTTCCTGGACCCCGAGTGGTTGAGCCGTGTTGATGACCACGAGTAC CCATTCCTTGTGAAAAATCAGTCTATCCGTTTCACGACGGTGCCATCGAA GACTTTCGACCTATCTTCCAAAAGCTTATCGATATGGCTCCTTGGATCCT CGGCGAGAAGTTCAACACCGTTTACCCCCACAAGGGCTCTATCAAAGCTC TCTGGGAAACGAAGTGGAAGTTTGCA back 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Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type |
KJC3_001230-T1.utr3p1 | KJC3_001230-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type |
KJC3_001230-T1.utr5p1 | KJC3_001230-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
Property Name | Value |
DBxref | InterPro:IPR010520 |
DBxref | InterPro:IPR029058 |
DBxref | PFAM:PF00326 |
DBxref | PFAM:PF06500 |
Product | Heptaketide hydrolyase ayg1 |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
ch1 | supercontig | ch1:3149497..3151377 - |
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