You are here

Home

KJC3_001232-T1, KJC3_001232-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_001232-T1
Unique NameKJC3_001232-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch1:3154918..3156354-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_001232-T1 ID=KJC3_001232-T1|Name=KJC3_001232-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1437bp|location=Sequence derived from alignment at ch1:3154918..3156354- (Aspergillus niger KJC3)
ACCGGTTCCAGAAACGCTTATCATCCCCTCAATCTCCGCCAACACTATCA
TCACACCACTTGCATACACACATACACACAATCCAACCAGTCTGCAAAGA
CAATCACAATCACAGCATAATGGCCGAAAAAGAAACCATTGTCGTAATAG
GGTACGTCGTATCCCAATGCCACCCCCTCAACCACAACAACAGCACCACT
AACCACCCCCACCCATTCCAACCAAACAGAGCCGGCATAATCGGCCTCAC
AACAGCCCTCTACATCCAACAACGCCTCTCCCCATCCCAACGCGTCCTCA
TTGCAGCCCGAGATTTTCCTCACAGCACATCCCTAAACTACGCCTCACCC
TGGGCAGGCGCCCACTACCGTCCCGTCCCTGGCTCCAACGCCCAACACAC
CCGAGAAGAAACACAAGCCCGCCGCACCTATGCACACTTCAAGACACTCG
CGGCTCAGGAGCCGGGCGCAGGTGTTCAGTCCACTACTGGCATTGAATAC
CTCGAGAACCCGCCGGCGGAGTACCTCAACGAGAAGAACATCCAGGCTGC
GTATGGGCATTTGGATGGGTTTGAGTACTTACAGCCCGGGCAGATGCCGG
GGGATGTGAAATGGGCTGTGAAGTATAAGACGTTTGTGGTGAATTCTCCC
GTGTATTGTGCGTGGTTGTTGAGGGAGTTTGTGTTGAGGGGTGGGGAGGT
GAAAGAGTACACGTTCGTAGATTTGAGGGAGGGGTTTTATCTCGCGGAGA
GGGTGAGGGCTGTGGTTAATTGTTCTGGGTTGGGGTTTGGGGATGAAAAG
AGTTATATTATTCGGGGTGAGTGGTTGTTTTCTCTTGGAGGATCTTGATG
TTGCTGACTCACTATTCAGGGCAAACGTGTCTGGTGAGGAATCCTTGCTC
GGCTACTATCACTCGACAGAATAGCGATGGCTCGTGGTCCTTCTGTATTC
CACGCCCATTGGGTGGTGGGACAATTATTGGGGGCACGAAGCAGCCGCAT
AATTGGGATCCTAATCCGTCAATGGAAACACGGGCCCAGCTATTGGCGAA
TGCTGCCAAGTGGTTTCCCTTCGAGGAGGGAAGTAAAGAAGAGTTCGATG
TGATTCGTGATATTGTTGGCCGTCGACCAGCACGAGAGGGGGGCATGAGG
ATTGAAGTGGAGAAGATAAATCAAGGTCAGGAAGTGATAGTTCATGCATA
CGGAGCTGGGGGTCGTGGTTTTGAATTGTCCTGGGGTGTGGCAGAGGATG
TTTACGACTTGATGCGACAAAACGGATTAATAAAGGCAAAAGCCTCGCTA
TAGAGTTGCCCACCTGAGAGATCCGCCTGACTACAGAAAGTCGCTCGGCT
ATTGCGCTACAGGAAGTACATGCGGCATACAAATCTATGAGTGAAAACTG
CATGGCAGCTGCAACTTCGGTAGAAGAAAGATGATAC
back to top

Coding sequence (CDS) from alignment at ch1:3154918..3156354-

>KJC3_001232-T1 ID=KJC3_001232-T1|Name=KJC3_001232-T1|organism=Aspergillus niger KJC3|type=CDS|length=3159bp|location=Sequence derived from alignment at ch1:3154918..3156354- (Aspergillus niger KJC3)
GGCAAACGTGTCTGGTGAGGAATCCTTGCTCGGCTACTATCACTCGACAG
AATAGCGATGGCTCGTGGTCCTTCTGTATTCCACGCCCATTGGGTGGTGG
GACAATTATTGGGGGCACGAAGCAGCCGCATAATTGGGATCCTAATCCGT
CAATGGAAACACGGGCCCAGCTATTGGCGAATGCTGCCAAGTGGTTTCCC
TTCGAGGAGGGAAGTAAAGAAGAGTTCGATGTGATTCGTGATATTGTTGG
CCGTCGACCAGCACGAGAGGGGGGCATGAGGATTGAAGTGGAGAAGATAA
ATCAAGGTCAGGAAGTGATAGTTCATGCATACGGAGCTGGGGGTCGTGGT
TTTGAATTGTCCTGGGGTGTGGCAGAGGATGTTTACGACTTGATGCGACA
AAACGGATTAATAAAGGCAAAAGCCTCGCTATAGAGCCGGCATAATCGGC
CTCACAACAGCCCTCTACATCCAACAACGCCTCTCCCCATCCCAACGCGT
CCTCATTGCAGCCCGAGATTTTCCTCACAGCACATCCCTAAACTACGCCT
CACCCTGGGCAGGCGCCCACTACCGTCCCGTCCCTGGCTCCAACGCCCAA
CACACCCGAGAAGAAACACAAGCCCGCCGCACCTATGCACACTTCAAGAC
ACTCGCGGCTCAGGAGCCGGGCGCAGGTGTTCAGTCCACTACTGGCATTG
AATACCTCGAGAACCCGCCGGCGGAGTACCTCAACGAGAAGAACATCCAG
GCTGCGTATGGGCATTTGGATGGGTTTGAGTACTTACAGCCCGGGCAGAT
GCCGGGGGATGTGAAATGGGCTGTGAAGTATAAGACGTTTGTGGTGAATT
CTCCCGTGTATTGTGCGTGGTTGTTGAGGGAGTTTGTGTTGAGGGGTGGG
GAGGTGAAAGAGTACACGTTCGTAGATTTGAGGGAGGGGTTTTATCTCGC
GGAGAGGGTGAGGGCTGTGGTTAATTGTTCTGGGTTGGGGTTTGGGGATG
AAAAGAGTTATATTATTCGGGATGGCCGAAAAAGAAACCATTGTCGTAAT
AGGGGCAAACGTGTCTGGTGAGGAATCCTTGCTCGGCTACTATCACTCGA
CAGAATAGCGATGGCTCGTGGTCCTTCTGTATTCCACGCCCATTGGGTGG
TGGGACAATTATTGGGGGCACGAAGCAGCCGCATAATTGGGATCCTAATC
CGTCAATGGAAACACGGGCCCAGCTATTGGCGAATGCTGCCAAGTGGTTT
CCCTTCGAGGAGGGAAGTAAAGAAGAGTTCGATGTGATTCGTGATATTGT
TGGCCGTCGACCAGCACGAGAGGGGGGCATGAGGATTGAAGTGGAGAAGA
TAAATCAAGGTCAGGAAGTGATAGTTCATGCATACGGAGCTGGGGGTCGT
GGTTTTGAATTGTCCTGGGGTGTGGCAGAGGATGTTTACGACTTGATGCG
ACAAAACGGATTAATAAAGGCAAAAGCCTCGCTATAGAGCCGGCATAATC
GGCCTCACAACAGCCCTCTACATCCAACAACGCCTCTCCCCATCCCAACG
CGTCCTCATTGCAGCCCGAGATTTTCCTCACAGCACATCCCTAAACTACG
CCTCACCCTGGGCAGGCGCCCACTACCGTCCCGTCCCTGGCTCCAACGCC
CAACACACCCGAGAAGAAACACAAGCCCGCCGCACCTATGCACACTTCAA
GACACTCGCGGCTCAGGAGCCGGGCGCAGGTGTTCAGTCCACTACTGGCA
TTGAATACCTCGAGAACCCGCCGGCGGAGTACCTCAACGAGAAGAACATC
CAGGCTGCGTATGGGCATTTGGATGGGTTTGAGTACTTACAGCCCGGGCA
GATGCCGGGGGATGTGAAATGGGCTGTGAAGTATAAGACGTTTGTGGTGA
ATTCTCCCGTGTATTGTGCGTGGTTGTTGAGGGAGTTTGTGTTGAGGGGT
GGGGAGGTGAAAGAGTACACGTTCGTAGATTTGAGGGAGGGGTTTTATCT
CGCGGAGAGGGTGAGGGCTGTGGTTAATTGTTCTGGGTTGGGGTTTGGGG
ATGAAAAGAGTTATATTATTCGGGATGGCCGAAAAAGAAACCATTGTCGT
AATAGGGGCAAACGTGTCTGGTGAGGAATCCTTGCTCGGCTACTATCACT
CGACAGAATAGCGATGGCTCGTGGTCCTTCTGTATTCCACGCCCATTGGG
TGGTGGGACAATTATTGGGGGCACGAAGCAGCCGCATAATTGGGATCCTA
ATCCGTCAATGGAAACACGGGCCCAGCTATTGGCGAATGCTGCCAAGTGG
TTTCCCTTCGAGGAGGGAAGTAAAGAAGAGTTCGATGTGATTCGTGATAT
TGTTGGCCGTCGACCAGCACGAGAGGGGGGCATGAGGATTGAAGTGGAGA
AGATAAATCAAGGTCAGGAAGTGATAGTTCATGCATACGGAGCTGGGGGT
CGTGGTTTTGAATTGTCCTGGGGTGTGGCAGAGGATGTTTACGACTTGAT
GCGACAAAACGGATTAATAAAGGCAAAAGCCTCGCTATAGAGCCGGCATA
ATCGGCCTCACAACAGCCCTCTACATCCAACAACGCCTCTCCCCATCCCA
ACGCGTCCTCATTGCAGCCCGAGATTTTCCTCACAGCACATCCCTAAACT
ACGCCTCACCCTGGGCAGGCGCCCACTACCGTCCCGTCCCTGGCTCCAAC
GCCCAACACACCCGAGAAGAAACACAAGCCCGCCGCACCTATGCACACTT
CAAGACACTCGCGGCTCAGGAGCCGGGCGCAGGTGTTCAGTCCACTACTG
GCATTGAATACCTCGAGAACCCGCCGGCGGAGTACCTCAACGAGAAGAAC
ATCCAGGCTGCGTATGGGCATTTGGATGGGTTTGAGTACTTACAGCCCGG
GCAGATGCCGGGGGATGTGAAATGGGCTGTGAAGTATAAGACGTTTGTGG
TGAATTCTCCCGTGTATTGTGCGTGGTTGTTGAGGGAGTTTGTGTTGAGG
GGTGGGGAGGTGAAAGAGTACACGTTCGTAGATTTGAGGGAGGGGTTTTA
TCTCGCGGAGAGGGTGAGGGCTGTGGTTAATTGTTCTGGGTTGGGGTTTG
GGGATGAAAAGAGTTATATTATTCGGGATGGCCGAAAAAGAAACCATTGT
CGTAATAGG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0055114oxidation-reduction process
GO:0046416D-amino acid metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0016491oxidoreductase activity
GO:0071949FAD binding
GO:0003884D-amino-acid oxidase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_001232KJC3_001232Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001232-T1KJC3_001232-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001232-T1.cdsKJC3_001232-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001232-T1.utr3p1KJC3_001232-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001232-T1.exon3KJC3_001232-T1.exon3Aspergillus niger KJC3exon
KJC3_001232-T1.exon2KJC3_001232-T1.exon2Aspergillus niger KJC3exon
KJC3_001232-T1.exon1KJC3_001232-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001232-T1.utr5p1KJC3_001232-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR006181
DBxrefInterPro:IPR006076
DBxrefInterPro:IPR023209
DBxrefPFAM:PF01266
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch1supercontigch1:3154918..3156354 -
Powered by Drupal