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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch1:3173625..3177011- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_001240-T1 ID=KJC3_001240-T1|Name=KJC3_001240-T1|organism=Aspergillus niger KJC3|type=mRNA|length=3387bp|location=Sequence derived from alignment at ch1:3173625..3177011- (Aspergillus niger KJC3)
CATCGCTTTTCAACCGCCAACAACCGTCATCGAACTCCACCACAACCATC
TCGCTGTCATCTCAAAACTCAGGCAAAATGTTGCTGATACCCGCCTAAAG
CGTTCTATGCGTGCTTTTGTATATCAACCCACGCAGTTATACCATTTCTC
CGTCTCCCCCCTTTCGCCCATCATGACCACAACACTCGAACGCAGCCTCT
CTCGCACGTCGAGCATGTCCATCCCTGTCTCAAGCCCCCGATTATCTCTC
ATCCACGAAAACACGCCTCCAGCCTTAGCAGATCCGTCCCTATCACACAT
CCATGACCGCCTGACTTTTCTGGACTCCCGCCTACTCGAGCTACGCTCCA
GCGTTCTGACTAAAGATGGCTACGTTGACCGACGAAACCGCGAAGACGAA
CACATTCGCCGCGAATTCGAAGCACACCGGTCAATTTCCAGCCGAATCGA
TCTCAATGTCGTGGCGTTGAAGACAGACGTCGACCAGTTAAAGTCAGGGA
TATCCCAACTCAAGTCCAGTATCGGCCAAAGCGGCAATGAGACCGTCTTC
CTTCGCAGTGATGTCGACCGCTTGTCGAAGAACGTGGAACAGATCCAGTC
AGATGTTGAGCACCTGCAGACTGACGTATGCGGATGCCGCGTGGAGATCA
GCAAACTACATGCGACCATCAGCCAACTTCGAACTGATCTGATTACCCTG
CAACATGAGACATCGCGGCATTTGACTTCTGTGTTCAATCGATTCTCTCT
CATCGAAGCTCGGATGAAGCATTCTGAACGAGTCCGTTTCAACTCGTTGG
CCCACACGACACACGCCCCGATCACGCCTGTTCCTGTAGTCGAGGAAGAC
GGGTCCTTGCAATGGCCCGAATACTTCCCTCGCACTGTTTGGAGGTTCTG
GTGTTTGAAGAAGCGAAGCAGGAGTAAGTGCAGAAAGCATGTGCCTCACA
ACAAGAAGCATCTAACATCAATCAGTCAATCGATTGGCGCAACTGGCCGA
GTTCTATCAGCTCGGAGGATACGAGTATTGGGGCCGCATGCATCAAGAGC
AGACGCTCTTTGCCAGTGATAGCGATTCCAGTGATTCCAGTGATTATCCG
TCCAACCTAAGTCGCGCAGAAGCCGTACGCCTATACCCCGAGGCCGCACA
CCAGGCGCTGGCCGCGACCTTGGGGTTGGTATATTATAAGATTCGAAACG
AAGTGGGCGAAGGCCCGAATGCTTCTATTACTCGCCCACCTAAACGCCAG
CAGGAAGAGGCTATTTCGGCTACTTCGAGCAAGGAGAAGCCGGTCAAAAT
GGCACGCCGGCCAACCGTGTCACCTACGACGCTGAAAAGGCTCATCACTG
GACCCTCTGTGGAGTCTAAGTCTTTGACCTCTGAAGAGTCTGATAAGCTT
GGCTGGAATGCCTACTCTGATGTGTCAGACGACACAATGAGCAAGCTTCG
TGGGATCGTATCGGACGAAGTTGGCACATTGCTTCGAGCCTTGGAGAAAG
GCCGAATCCGACTTCGATCCAACAGATCGGAGCGGACGAATTTGTCGCCC
ACTGAGTCTAGAGCCGCCGAGTCGAAAGCTGGCTCTCGCAACAGCAAGGC
TGCACCTGAGGATGAACCAACTCTGCCGAATACGATTCCTACTGAAGTAT
TATCTATTTCCTCTGATCATGCCGAGAAAATCGGAGATCACGAGCTTCCA
GACACCGCGTCTGATGCTTCGAGTCCGCTGACTTGAGCCCCATGGGATAC
ACACTGCAGTTGTGATATCTCTCAATACGTCGATACGTCAGTCACGTCGT
CTAAACCGCCTTGCCGCTGCATAGCAGACGCTCGGGTATTCTTGGAACGC
CGTTCCGCGCCAGGCTTATGTCGCGCCATCGATTGATCGAGGCTGCGGAG
CCTGCTGGAACCTCCGATGAAATATCCTGAAAGGCAGAGACGACAGTTGC
TCGCCAAAAGTGAGCGTTTGACATATATCGACAATCTGTCATATCCTGGC
TATCTAAAGCCGTCACGGACGTTGATACCCGACAAAGCATAAATGGCGTC
CTAAGTTTGATTTTGGTTCATGTGATACCCCATGTTTGGATATTGGATTT
AGCGTACATACTTGGGATTTTGAGTGCACAATTAACCAGTGATTATTGAC
CAAGCATAGCTCGATCCGGGACGAACGGGTCGGGACTTCGAGTAACTACG
TATGCGCATCGAGTTCGCTGACTTCGCCGCTTCAGACTGCCTTGAAGTGC
ATCAGCCGATCATAGATGATTCTTCCTAGTACAGATGCCAAAGTAAAGCA
CGGTTCCACCCGGCTCTCCAGTTGTCGCTATGATATGAACAAGTATTAGG
TACAAGTGAATGATCCCCTCCTCCTTCTCTGTCATGATGCTCCAGCCAAG
TCTAGATGGCCCTACGCTGCTGCCGAAGGCTCGAACAGATCCTTCTGGAG
GACTTCCAGAACCTTGGACTCGTCGACGCCTCGGAGGTCAATGGCACCCG
GAGGCAATTGAGCGTCGTCTGCATCCCCCGTATCATCGCTGCTCTCCTCC
GGCGACTGATGCGTGCGTAGGTACTCTTCCTCTAGGATGTACTTGGCATC
TTCCTGGGCTCGTATAGTATCAGGTGAGTCCGGCAGTACGTAGATAGTAG
GGAACTCCAAGACTATGTGATCACGTAGAGCAGCAGCAAGTGAGATCTTT
GGGGGCAGGGGGGCCAGAACAGGCTGTTTCGTAGCTGTCCGCGGACGATG
AAGATAGAAGTAGAGGTCACGGTGGGGGGTAAGTGGTAGCGAGTCCGATG
TAATTGGTGTCGCATTTGAAGCTTCCGGTTGAGCAGTTGGTGCGTCTGTC
GGCTGTGTAGGTTCTGTAGTCGAGGCTGGCTCGGGGGCTGTAGTCGAGGG
AGCATCCTGTGGTTGTTGCTCCTCCGTCTTCAACTCGGACGTCCCCTCCG
GCTTCTCATCCCCAGTCTGTTTCTGATCCTGCTCATCACTCCCCTCCTCC
TTGGGAACAGGAACCACGCGGTCATAAGAATCCGCAACAGGAGCCGTCTC
CGAACAATTTCTCATCCTCTTCTCCCCATCACTCAGAATCCACTCGACCG
TCCAAACCAAACACTGATTCCTACATACCACCCAGTTAGCGTTCATCCCA
ACCCCACCAAACAATCACCCCAAATCAAGCAAAGAAATAGAGATACACAT
ACCTTCCCAACCACCGACTCCCATTCCCCTTATTCCTACTCATCCCCTTC
GGCGCTCTAACAACCTTAACCCCTCTCTCCTCCGCGCGTCTCAAAAACTC
CATCTCAGCCCTCGTCCCACCACCTGCACCACCATCTCCCCTCTTTCTCT
TCCCCCCAGCACCAGCACCACCCTTCTTCCCCATAGC back to topCoding sequence (CDS) from alignment at ch1:3173625..3177011- >KJC3_001240-T1 ID=KJC3_001240-T1|Name=KJC3_001240-T1|organism=Aspergillus niger KJC3|type=CDS|length=3156bp|location=Sequence derived from alignment at ch1:3173625..3177011- (Aspergillus niger KJC3)
TCAATCGATTGGCGCAACTGGCCGAGTTCTATCAGCTCGGAGGATACGAG
TATTGGGGCCGCATGCATCAAGAGCAGACGCTCTTTGCCAGTGATAGCGA
TTCCAGTGATTCCAGTGATTATCCGTCCAACCTAAGTCGCGCAGAAGCCG
TACGCCTATACCCCGAGGCCGCACACCAGGCGCTGGCCGCGACCTTGGGG
TTGGTATATTATAAGATTCGAAACGAAGTGGGCGAAGGCCCGAATGCTTC
TATTACTCGCCCACCTAAACGCCAGCAGGAAGAGGCTATTTCGGCTACTT
CGAGCAAGGAGAAGCCGGTCAAAATGGCACGCCGGCCAACCGTGTCACCT
ACGACGCTGAAAAGGCTCATCACTGGACCCTCTGTGGAGTCTAAGTCTTT
GACCTCTGAAGAGTCTGATAAGCTTGGCTGGAATGCCTACTCTGATGTGT
CAGACGACACAATGAGCAAGCTTCGTGGGATCGTATCGGACGAAGTTGGC
ACATTGCTTCGAGCCTTGGAGAAAGGCCGAATCCGACTTCGATCCAACAG
ATCGGAGCGGACGAATTTGTCGCCCACTGAGTCTAGAGCCGCCGAGTCGA
AAGCTGGCTCTCGCAACAGCAAGGCTGCACCTGAGGATGAACCAACTCTG
CCGAATACGATTCCTACTGAAGTATTATCTATTTCCTCTGATCATGCCGA
GAAAATCGGAGATCACGAGCTTCCAGACACCGCGTCTGATGCTTCGAGTC
CGCTGACTTGAATGCGTGCTTTTGTATATCAACCCACGCAGTTATACCAT
TTCTCCGTCTCCCCCCTTTCGCCCATCATGACCACAACACTCGAACGCAG
CCTCTCTCGCACGTCGAGCATGTCCATCCCTGTCTCAAGCCCCCGATTAT
CTCTCATCCACGAAAACACGCCTCCAGCCTTAGCAGATCCGTCCCTATCA
CACATCCATGACCGCCTGACTTTTCTGGACTCCCGCCTACTCGAGCTACG
CTCCAGCGTTCTGACTAAAGATGGCTACGTTGACCGACGAAACCGCGAAG
ACGAACACATTCGCCGCGAATTCGAAGCACACCGGTCAATTTCCAGCCGA
ATCGATCTCAATGTCGTGGCGTTGAAGACAGACGTCGACCAGTTAAAGTC
AGGGATATCCCAACTCAAGTCCAGTATCGGCCAAAGCGGCAATGAGACCG
TCTTCCTTCGCAGTGATGTCGACCGCTTGTCGAAGAACGTGGAACAGATC
CAGTCAGATGTTGAGCACCTGCAGACTGACGTATGCGGATGCCGCGTGGA
GATCAGCAAACTACATGCGACCATCAGCCAACTTCGAACTGATCTGATTA
CCCTGCAACATGAGACATCGCGGCATTTGACTTCTGTGTTCAATCGATTC
TCTCTCATCGAAGCTCGGATGAAGCATTCTGAACGAGTCCGTTTCAACTC
GTTGGCCCACACGACACACGCCCCGATCACGCCTGTTCCTGTAGTCGAGG
AAGACGGGTCCTTGCAATGGCCCGAATACTTCCCTCGCACTGTTTGGAGG
TTCTGGTGTTTGAAGAAGCGAAGCAGGATCAATCGATTGGCGCAACTGGC
CGAGTTCTATCAGCTCGGAGGATACGAGTATTGGGGCCGCATGCATCAAG
AGCAGACGCTCTTTGCCAGTGATAGCGATTCCAGTGATTCCAGTGATTAT
CCGTCCAACCTAAGTCGCGCAGAAGCCGTACGCCTATACCCCGAGGCCGC
ACACCAGGCGCTGGCCGCGACCTTGGGGTTGGTATATTATAAGATTCGAA
ACGAAGTGGGCGAAGGCCCGAATGCTTCTATTACTCGCCCACCTAAACGC
CAGCAGGAAGAGGCTATTTCGGCTACTTCGAGCAAGGAGAAGCCGGTCAA
AATGGCACGCCGGCCAACCGTGTCACCTACGACGCTGAAAAGGCTCATCA
CTGGACCCTCTGTGGAGTCTAAGTCTTTGACCTCTGAAGAGTCTGATAAG
CTTGGCTGGAATGCCTACTCTGATGTGTCAGACGACACAATGAGCAAGCT
TCGTGGGATCGTATCGGACGAAGTTGGCACATTGCTTCGAGCCTTGGAGA
AAGGCCGAATCCGACTTCGATCCAACAGATCGGAGCGGACGAATTTGTCG
CCCACTGAGTCTAGAGCCGCCGAGTCGAAAGCTGGCTCTCGCAACAGCAA
GGCTGCACCTGAGGATGAACCAACTCTGCCGAATACGATTCCTACTGAAG
TATTATCTATTTCCTCTGATCATGCCGAGAAAATCGGAGATCACGAGCTT
CCAGACACCGCGTCTGATGCTTCGAGTCCGCTGACTTGAATGCGTGCTTT
TGTATATCAACCCACGCAGTTATACCATTTCTCCGTCTCCCCCCTTTCGC
CCATCATGACCACAACACTCGAACGCAGCCTCTCTCGCACGTCGAGCATG
TCCATCCCTGTCTCAAGCCCCCGATTATCTCTCATCCACGAAAACACGCC
TCCAGCCTTAGCAGATCCGTCCCTATCACACATCCATGACCGCCTGACTT
TTCTGGACTCCCGCCTACTCGAGCTACGCTCCAGCGTTCTGACTAAAGAT
GGCTACGTTGACCGACGAAACCGCGAAGACGAACACATTCGCCGCGAATT
CGAAGCACACCGGTCAATTTCCAGCCGAATCGATCTCAATGTCGTGGCGT
TGAAGACAGACGTCGACCAGTTAAAGTCAGGGATATCCCAACTCAAGTCC
AGTATCGGCCAAAGCGGCAATGAGACCGTCTTCCTTCGCAGTGATGTCGA
CCGCTTGTCGAAGAACGTGGAACAGATCCAGTCAGATGTTGAGCACCTGC
AGACTGACGTATGCGGATGCCGCGTGGAGATCAGCAAACTACATGCGACC
ATCAGCCAACTTCGAACTGATCTGATTACCCTGCAACATGAGACATCGCG
GCATTTGACTTCTGTGTTCAATCGATTCTCTCTCATCGAAGCTCGGATGA
AGCATTCTGAACGAGTCCGTTTCAACTCGTTGGCCCACACGACACACGCC
CCGATCACGCCTGTTCCTGTAGTCGAGGAAGACGGGTCCTTGCAATGGCC
CGAATACTTCCCTCGCACTGTTTGGAGGTTCTGGTGTTTGAAGAAGCGAA
GCAGGA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_001240-T1.utr3p1 | KJC3_001240-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_001240-T1.utr5p1 | KJC3_001240-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
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| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
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| ch1 | supercontig | ch1:3173625..3177011 - |
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