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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch1:3185729..3188151- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_001244-T1 ID=KJC3_001244-T1|Name=KJC3_001244-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2423bp|location=Sequence derived from alignment at ch1:3185729..3188151- (Aspergillus niger KJC3) CGACCGCCAAGAACACGACCTTTTCTGCGATAACGCCGGATGAGCATGAC
TTAGCCTACCGCGATCTGCTGCTCTCCTTTTCTCCCCCTGATAGCAAGTG
GCCCCCCGAACAGCACGGGCTTCCTCTCCAACCACTCTAGTGCTCAATGA
TCTTATCAGCCCGTTGTGGGTGTTGAGACTGCTATCTGTCGGGAACCTTA
TGGGGGGTTGGTTGTCGCAAACATACCATCACGCTAAATTGAATCGGCTG
CCTTGACCTGAACAACTACGACAGCATGGTCAATGGGAAGAATGGCCAGC
CGGACGCTGGGCTGAGAAGCCTCGATCATTGTATGTGGTGCCGATGTGGA
ATAGCAATTGTCTTCAGAGGACTAACCGCGACTGCTCGTCAATTGGTATC
AGATCGAAACCAGCTTCCTTATTGGCGTTACTGGCCACGACAGAAGCTCC
TCCCGCTGATTCGGTATGAGACACCGTATCTGGCTTGGGTCCAGGAGCGG
GTTCGTACTCCGGCCCTGGACTCCTACTTTGCCTTCACGGCCAACCTGGG
CACCCATACCTTTTTCATGGTTTTCCTGCCGATCTTGTTCTGGTGCGGGT
ATACGAGCTTGGGGCGCGGGTAGGTGCCCATGACGAGCCCTTAAACAGAG
GGAAAACTATTATCTGGCCTGCAATCGAGCTGACGACTCATTTTCTCAGA
ATGGTGCATCTTTTGGCTTCCGGCGTGTTTTTCAGTGGTTTCATCAAGGA
CTTGCTATGCCTACCGCGACCTCTATCCCCTCCTCTCCAACGGATAACGA
TGTCCGGCTCTGCGGCGTTGGAATACGGATTTCCTTCGACTCATTCCACC
AATGCGGTCTCGGTCGCGGCGTACGCTCTCGCACTATTGAACTCTTCCGA
ATCCACCCTGAGCCCCCAGGTAAACATCGCTCTCCAAGCCATAACATACC
TCTACGTCTGTTCCATTGTTCTGGGTCGTCTGTACTGTGGTATGCATGGC
TTCTTCGATGTTGTCATTGGATGTTTGCTCGGGTTCCTCCTCGCCTTCCT
ACAGTATACGCTTGGACCGACCATTGATGAGTATGTCCTTTCTGCTACCG
GAAGGGGGGCTACACTAGTGATTCTCTTGATTTTGGGGTTGGTTCGTATA
CACCCAGAGCCTGCCGATGACTGCCCGTGCTTCGACGATAGTGTGGCCTT
TGCAGGAGTCATGCTTGGAGCACAAGTGGCTTATTGGCATATAGCCAGGT
TAAGCCTAGTGTGGGATGAACCTGTGCCGGCCACTGTTCCATTTGAATTT
CGGCAAGTAGGACTGGTCAAGACGTCTCTCCGCCTCGTCATTGGTGTTCT
TATGCTCTTCACGTGGCGAGCCGTCACCAAACCTCTTTTGCTCCGGGCTT
TGCCTCCCGTCTTCCGGGGCCTGGAAAAGCTGGGCCTCATACTTCCCCGG
AGATTCTTTAGGAATGCCTCGTAAGTCTACTTGCGCGCCCTTGAACAGAA
AAAGAAGACGAAGAGTGTCTGCCAAAATAGAGCACAGCTAACGTAACGAG
CAAAACAGGCAATACACGAAAGTCCCATCCCAGCTCCGGGACCACGAAGT
GCTGCCGGGCTTTTCGGAGATACCTTCAATTATAACCACGATACGGCATC
CCCGACGACGCGCTATTTCAATCGGTCCGCAGTCAGAAGCTGATGCGTAT
GAGACACTGGCCTATCGCGAGAAACGGAGACGGGAAAGTCTTTCAACAGC
CAACCAAGCATCTCCAGTGCCGGAAGAAGGTGGACCGGTTTCGGAGTCCG
AGCCACGGAAACTGTCGCGAAAGCCGTCTAAGTTACACGAGTATGAGAAT
ATGATGGGCACAGGTGCCCCTGCTGTGGCGAGTTCTGTCGATGTTAGCTC
ACAAGAAGCTTCTTCGACCGTGCCCTTTCCTCCGTTTGAGTCGGAAATTG
AAGCCGACGAGAAGGAAGTGTTTTCGCAGATCAAACAGCCCCGGGTGCGC
TATGATGTAGAGGTTGTAACGAAACTTGTTGTATATTCCGGTAGGTCAAC
CCCTGTGCGTCGAGTTATAAAGTTGCGGATGCTGACTGTGTTTGACTAGG
CATTGCCTGGATTGTGATGGAGGGAGCGCCTTGGTTCTTCGATCGGATAG
GGCTGGCGCCATAGTAGCTTAGTAGTCGCTGGGTGGGTCCGACGGCCATC
ACCCATTTCGAATTCTGTAAACCTTTTGCTATATTCTCTACGGTTCAGCG
GGCTGGACTAACCAAAGTCCTTGGTGTATAACATAGCTGCCGTTCTTGTA
CATACACCGTTGATGATCTCTTTTCTATTTGTTCTTAAAAGGTGGGATAT
TTAGCCATTAGTGGAGGCGAATGAGAGTTGATACTAGTAGTAGTATTTCT
AGTAGGGAGTCTAAAATTTTAAG back to topCoding sequence (CDS) from alignment at ch1:3185729..3188151- >KJC3_001244-T1 ID=KJC3_001244-T1|Name=KJC3_001244-T1|organism=Aspergillus niger KJC3|type=CDS|length=7950bp|location=Sequence derived from alignment at ch1:3185729..3188151- (Aspergillus niger KJC3) GCATTGCCTGGATTGTGATGGAGGGAGCGCCTTGGTTCTTCGATCGGATA GGGCTGGCGCCATAGGCAATACACGAAAGTCCCATCCCAGCTCCGGGACC ACGAAGTGCTGCCGGGCTTTTCGGAGATACCTTCAATTATAACCACGATA CGGCATCCCCGACGACGCGCTATTTCAATCGGTCCGCAGTCAGAAGCTGA TGCGTATGAGACACTGGCCTATCGCGAGAAACGGAGACGGGAAAGTCTTT CAACAGCCAACCAAGCATCTCCAGTGCCGGAAGAAGGTGGACCGGTTTCG GAGTCCGAGCCACGGAAACTGTCGCGAAAGCCGTCTAAGTTACACGAGTA TGAGAATATGATGGGCACAGGTGCCCCTGCTGTGGCGAGTTCTGTCGATG TTAGCTCACAAGAAGCTTCTTCGACCGTGCCCTTTCCTCCGTTTGAGTCG GAAATTGAAGCCGACGAGAAGGAAGTGTTTTCGCAGATCAAACAGCCCCG GGTGCGCTATGATGTAGAGGTTGTAACGAAACTTGTTGTATATTCCGAAT GGTGCATCTTTTGGCTTCCGGCGTGTTTTTCAGTGGTTTCATCAAGGACT TGCTATGCCTACCGCGACCTCTATCCCCTCCTCTCCAACGGATAACGATG TCCGGCTCTGCGGCGTTGGAATACGGATTTCCTTCGACTCATTCCACCAA TGCGGTCTCGGTCGCGGCGTACGCTCTCGCACTATTGAACTCTTCCGAAT CCACCCTGAGCCCCCAGGTAAACATCGCTCTCCAAGCCATAACATACCTC TACGTCTGTTCCATTGTTCTGGGTCGTCTGTACTGTGGTATGCATGGCTT CTTCGATGTTGTCATTGGATGTTTGCTCGGGTTCCTCCTCGCCTTCCTAC AGTATACGCTTGGACCGACCATTGATGAGTATGTCCTTTCTGCTACCGGA AGGGGGGCTACACTAGTGATTCTCTTGATTTTGGGGTTGGTTCGTATACA CCCAGAGCCTGCCGATGACTGCCCGTGCTTCGACGATAGTGTGGCCTTTG CAGGAGTCATGCTTGGAGCACAAGTGGCTTATTGGCATATAGCCAGGTTA AGCCTAGTGTGGGATGAACCTGTGCCGGCCACTGTTCCATTTGAATTTCG GCAAGTAGGACTGGTCAAGACGTCTCTCCGCCTCGTCATTGGTGTTCTTA TGCTCTTCACGTGGCGAGCCGTCACCAAACCTCTTTTGCTCCGGGCTTTG CCTCCCGTCTTCCGGGGCCTGGAAAAGCTGGGCCTCATACTTCCCCGGAG ATTCTTTAGGAATGCCTCATCGAAACCAGCTTCCTTATTGGCGTTACTGG CCACGACAGAAGCTCCTCCCGCTGATTCGGTATGAGACACCGTATCTGGC TTGGGTCCAGGAGCGGGTTCGTACTCCGGCCCTGGACTCCTACTTTGCCT TCACGGCCAACCTGGGCACCCATACCTTTTTCATGGTTTTCCTGCCGATC TTGTTCTGGTGCGGGTATACGAGCTTGGGGCGCGGATGGTCAATGGGAAG AATGGCCAGCCGGACGCTGGGCTGAGAAGCCTCGATCATTGCATTGCCTG GATTGTGATGGAGGGAGCGCCTTGGTTCTTCGATCGGATAGGGCTGGCGC CATAGGCAATACACGAAAGTCCCATCCCAGCTCCGGGACCACGAAGTGCT GCCGGGCTTTTCGGAGATACCTTCAATTATAACCACGATACGGCATCCCC GACGACGCGCTATTTCAATCGGTCCGCAGTCAGAAGCTGATGCGTATGAG ACACTGGCCTATCGCGAGAAACGGAGACGGGAAAGTCTTTCAACAGCCAA CCAAGCATCTCCAGTGCCGGAAGAAGGTGGACCGGTTTCGGAGTCCGAGC CACGGAAACTGTCGCGAAAGCCGTCTAAGTTACACGAGTATGAGAATATG ATGGGCACAGGTGCCCCTGCTGTGGCGAGTTCTGTCGATGTTAGCTCACA AGAAGCTTCTTCGACCGTGCCCTTTCCTCCGTTTGAGTCGGAAATTGAAG CCGACGAGAAGGAAGTGTTTTCGCAGATCAAACAGCCCCGGGTGCGCTAT GATGTAGAGGTTGTAACGAAACTTGTTGTATATTCCGAATGGTGCATCTT TTGGCTTCCGGCGTGTTTTTCAGTGGTTTCATCAAGGACTTGCTATGCCT ACCGCGACCTCTATCCCCTCCTCTCCAACGGATAACGATGTCCGGCTCTG CGGCGTTGGAATACGGATTTCCTTCGACTCATTCCACCAATGCGGTCTCG GTCGCGGCGTACGCTCTCGCACTATTGAACTCTTCCGAATCCACCCTGAG CCCCCAGGTAAACATCGCTCTCCAAGCCATAACATACCTCTACGTCTGTT CCATTGTTCTGGGTCGTCTGTACTGTGGTATGCATGGCTTCTTCGATGTT GTCATTGGATGTTTGCTCGGGTTCCTCCTCGCCTTCCTACAGTATACGCT TGGACCGACCATTGATGAGTATGTCCTTTCTGCTACCGGAAGGGGGGCTA CACTAGTGATTCTCTTGATTTTGGGGTTGGTTCGTATACACCCAGAGCCT GCCGATGACTGCCCGTGCTTCGACGATAGTGTGGCCTTTGCAGGAGTCAT GCTTGGAGCACAAGTGGCTTATTGGCATATAGCCAGGTTAAGCCTAGTGT GGGATGAACCTGTGCCGGCCACTGTTCCATTTGAATTTCGGCAAGTAGGA CTGGTCAAGACGTCTCTCCGCCTCGTCATTGGTGTTCTTATGCTCTTCAC GTGGCGAGCCGTCACCAAACCTCTTTTGCTCCGGGCTTTGCCTCCCGTCT TCCGGGGCCTGGAAAAGCTGGGCCTCATACTTCCCCGGAGATTCTTTAGG AATGCCTCATCGAAACCAGCTTCCTTATTGGCGTTACTGGCCACGACAGA AGCTCCTCCCGCTGATTCGGTATGAGACACCGTATCTGGCTTGGGTCCAG GAGCGGGTTCGTACTCCGGCCCTGGACTCCTACTTTGCCTTCACGGCCAA CCTGGGCACCCATACCTTTTTCATGGTTTTCCTGCCGATCTTGTTCTGGT GCGGGTATACGAGCTTGGGGCGCGGATGGTCAATGGGAAGAATGGCCAGC CGGACGCTGGGCTGAGAAGCCTCGATCATTGCATTGCCTGGATTGTGATG GAGGGAGCGCCTTGGTTCTTCGATCGGATAGGGCTGGCGCCATAGGCAAT ACACGAAAGTCCCATCCCAGCTCCGGGACCACGAAGTGCTGCCGGGCTTT TCGGAGATACCTTCAATTATAACCACGATACGGCATCCCCGACGACGCGC TATTTCAATCGGTCCGCAGTCAGAAGCTGATGCGTATGAGACACTGGCCT ATCGCGAGAAACGGAGACGGGAAAGTCTTTCAACAGCCAACCAAGCATCT CCAGTGCCGGAAGAAGGTGGACCGGTTTCGGAGTCCGAGCCACGGAAACT GTCGCGAAAGCCGTCTAAGTTACACGAGTATGAGAATATGATGGGCACAG GTGCCCCTGCTGTGGCGAGTTCTGTCGATGTTAGCTCACAAGAAGCTTCT TCGACCGTGCCCTTTCCTCCGTTTGAGTCGGAAATTGAAGCCGACGAGAA GGAAGTGTTTTCGCAGATCAAACAGCCCCGGGTGCGCTATGATGTAGAGG TTGTAACGAAACTTGTTGTATATTCCGAATGGTGCATCTTTTGGCTTCCG GCGTGTTTTTCAGTGGTTTCATCAAGGACTTGCTATGCCTACCGCGACCT CTATCCCCTCCTCTCCAACGGATAACGATGTCCGGCTCTGCGGCGTTGGA ATACGGATTTCCTTCGACTCATTCCACCAATGCGGTCTCGGTCGCGGCGT ACGCTCTCGCACTATTGAACTCTTCCGAATCCACCCTGAGCCCCCAGGTA AACATCGCTCTCCAAGCCATAACATACCTCTACGTCTGTTCCATTGTTCT GGGTCGTCTGTACTGTGGTATGCATGGCTTCTTCGATGTTGTCATTGGAT GTTTGCTCGGGTTCCTCCTCGCCTTCCTACAGTATACGCTTGGACCGACC ATTGATGAGTATGTCCTTTCTGCTACCGGAAGGGGGGCTACACTAGTGAT TCTCTTGATTTTGGGGTTGGTTCGTATACACCCAGAGCCTGCCGATGACT GCCCGTGCTTCGACGATAGTGTGGCCTTTGCAGGAGTCATGCTTGGAGCA CAAGTGGCTTATTGGCATATAGCCAGGTTAAGCCTAGTGTGGGATGAACC TGTGCCGGCCACTGTTCCATTTGAATTTCGGCAAGTAGGACTGGTCAAGA CGTCTCTCCGCCTCGTCATTGGTGTTCTTATGCTCTTCACGTGGCGAGCC GTCACCAAACCTCTTTTGCTCCGGGCTTTGCCTCCCGTCTTCCGGGGCCT GGAAAAGCTGGGCCTCATACTTCCCCGGAGATTCTTTAGGAATGCCTCAT CGAAACCAGCTTCCTTATTGGCGTTACTGGCCACGACAGAAGCTCCTCCC GCTGATTCGGTATGAGACACCGTATCTGGCTTGGGTCCAGGAGCGGGTTC GTACTCCGGCCCTGGACTCCTACTTTGCCTTCACGGCCAACCTGGGCACC CATACCTTTTTCATGGTTTTCCTGCCGATCTTGTTCTGGTGCGGGTATAC GAGCTTGGGGCGCGGATGGTCAATGGGAAGAATGGCCAGCCGGACGCTGG GCTGAGAAGCCTCGATCATTGCATTGCCTGGATTGTGATGGAGGGAGCGC CTTGGTTCTTCGATCGGATAGGGCTGGCGCCATAGGCAATACACGAAAGT CCCATCCCAGCTCCGGGACCACGAAGTGCTGCCGGGCTTTTCGGAGATAC CTTCAATTATAACCACGATACGGCATCCCCGACGACGCGCTATTTCAATC GGTCCGCAGTCAGAAGCTGATGCGTATGAGACACTGGCCTATCGCGAGAA ACGGAGACGGGAAAGTCTTTCAACAGCCAACCAAGCATCTCCAGTGCCGG AAGAAGGTGGACCGGTTTCGGAGTCCGAGCCACGGAAACTGTCGCGAAAG CCGTCTAAGTTACACGAGTATGAGAATATGATGGGCACAGGTGCCCCTGC TGTGGCGAGTTCTGTCGATGTTAGCTCACAAGAAGCTTCTTCGACCGTGC CCTTTCCTCCGTTTGAGTCGGAAATTGAAGCCGACGAGAAGGAAGTGTTT TCGCAGATCAAACAGCCCCGGGTGCGCTATGATGTAGAGGTTGTAACGAA ACTTGTTGTATATTCCGAATGGTGCATCTTTTGGCTTCCGGCGTGTTTTT CAGTGGTTTCATCAAGGACTTGCTATGCCTACCGCGACCTCTATCCCCTC CTCTCCAACGGATAACGATGTCCGGCTCTGCGGCGTTGGAATACGGATTT CCTTCGACTCATTCCACCAATGCGGTCTCGGTCGCGGCGTACGCTCTCGC ACTATTGAACTCTTCCGAATCCACCCTGAGCCCCCAGGTAAACATCGCTC TCCAAGCCATAACATACCTCTACGTCTGTTCCATTGTTCTGGGTCGTCTG TACTGTGGTATGCATGGCTTCTTCGATGTTGTCATTGGATGTTTGCTCGG GTTCCTCCTCGCCTTCCTACAGTATACGCTTGGACCGACCATTGATGAGT ATGTCCTTTCTGCTACCGGAAGGGGGGCTACACTAGTGATTCTCTTGATT TTGGGGTTGGTTCGTATACACCCAGAGCCTGCCGATGACTGCCCGTGCTT CGACGATAGTGTGGCCTTTGCAGGAGTCATGCTTGGAGCACAAGTGGCTT ATTGGCATATAGCCAGGTTAAGCCTAGTGTGGGATGAACCTGTGCCGGCC ACTGTTCCATTTGAATTTCGGCAAGTAGGACTGGTCAAGACGTCTCTCCG CCTCGTCATTGGTGTTCTTATGCTCTTCACGTGGCGAGCCGTCACCAAAC CTCTTTTGCTCCGGGCTTTGCCTCCCGTCTTCCGGGGCCTGGAAAAGCTG GGCCTCATACTTCCCCGGAGATTCTTTAGGAATGCCTCATCGAAACCAGC TTCCTTATTGGCGTTACTGGCCACGACAGAAGCTCCTCCCGCTGATTCGG TATGAGACACCGTATCTGGCTTGGGTCCAGGAGCGGGTTCGTACTCCGGC CCTGGACTCCTACTTTGCCTTCACGGCCAACCTGGGCACCCATACCTTTT TCATGGTTTTCCTGCCGATCTTGTTCTGGTGCGGGTATACGAGCTTGGGG CGCGGATGGTCAATGGGAAGAATGGCCAGCCGGACGCTGGGCTGAGAAGC CTCGATCATTGCATTGCCTGGATTGTGATGGAGGGAGCGCCTTGGTTCTT CGATCGGATAGGGCTGGCGCCATAGGCAATACACGAAAGTCCCATCCCAG CTCCGGGACCACGAAGTGCTGCCGGGCTTTTCGGAGATACCTTCAATTAT AACCACGATACGGCATCCCCGACGACGCGCTATTTCAATCGGTCCGCAGT CAGAAGCTGATGCGTATGAGACACTGGCCTATCGCGAGAAACGGAGACGG GAAAGTCTTTCAACAGCCAACCAAGCATCTCCAGTGCCGGAAGAAGGTGG ACCGGTTTCGGAGTCCGAGCCACGGAAACTGTCGCGAAAGCCGTCTAAGT TACACGAGTATGAGAATATGATGGGCACAGGTGCCCCTGCTGTGGCGAGT TCTGTCGATGTTAGCTCACAAGAAGCTTCTTCGACCGTGCCCTTTCCTCC GTTTGAGTCGGAAATTGAAGCCGACGAGAAGGAAGTGTTTTCGCAGATCA AACAGCCCCGGGTGCGCTATGATGTAGAGGTTGTAACGAAACTTGTTGTA TATTCCGAATGGTGCATCTTTTGGCTTCCGGCGTGTTTTTCAGTGGTTTC ATCAAGGACTTGCTATGCCTACCGCGACCTCTATCCCCTCCTCTCCAACG GATAACGATGTCCGGCTCTGCGGCGTTGGAATACGGATTTCCTTCGACTC ATTCCACCAATGCGGTCTCGGTCGCGGCGTACGCTCTCGCACTATTGAAC TCTTCCGAATCCACCCTGAGCCCCCAGGTAAACATCGCTCTCCAAGCCAT AACATACCTCTACGTCTGTTCCATTGTTCTGGGTCGTCTGTACTGTGGTA TGCATGGCTTCTTCGATGTTGTCATTGGATGTTTGCTCGGGTTCCTCCTC GCCTTCCTACAGTATACGCTTGGACCGACCATTGATGAGTATGTCCTTTC TGCTACCGGAAGGGGGGCTACACTAGTGATTCTCTTGATTTTGGGGTTGG TTCGTATACACCCAGAGCCTGCCGATGACTGCCCGTGCTTCGACGATAGT GTGGCCTTTGCAGGAGTCATGCTTGGAGCACAAGTGGCTTATTGGCATAT AGCCAGGTTAAGCCTAGTGTGGGATGAACCTGTGCCGGCCACTGTTCCAT TTGAATTTCGGCAAGTAGGACTGGTCAAGACGTCTCTCCGCCTCGTCATT GGTGTTCTTATGCTCTTCACGTGGCGAGCCGTCACCAAACCTCTTTTGCT CCGGGCTTTGCCTCCCGTCTTCCGGGGCCTGGAAAAGCTGGGCCTCATAC TTCCCCGGAGATTCTTTAGGAATGCCTCATCGAAACCAGCTTCCTTATTG GCGTTACTGGCCACGACAGAAGCTCCTCCCGCTGATTCGGTATGAGACAC CGTATCTGGCTTGGGTCCAGGAGCGGGTTCGTACTCCGGCCCTGGACTCC TACTTTGCCTTCACGGCCAACCTGGGCACCCATACCTTTTTCATGGTTTT CCTGCCGATCTTGTTCTGGTGCGGGTATACGAGCTTGGGGCGCGGATGGT CAATGGGAAGAATGGCCAGCCGGACGCTGGGCTGAGAAGCCTCGATCATT back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
| KJC3_001244-T1.utr3p1 | KJC3_001244-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
| KJC3_001244-T1.utr5p1 | KJC3_001244-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
| DBxref | InterPro:IPR036938 |
| DBxref | InterPro:IPR000326 |
| DBxref | PFAM:PF01569 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
| ch1 | supercontig | ch1:3185729..3188151 - |
|