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KJC3_001246-T1, KJC3_001246-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_001246-T1
Unique NameKJC3_001246-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch1:3192126..3192957-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_001246-T1 ID=KJC3_001246-T1|Name=KJC3_001246-T1|organism=Aspergillus niger KJC3|type=mRNA|length=832bp|location=Sequence derived from alignment at ch1:3192126..3192957- (Aspergillus niger KJC3)
CACGCGTGCTATCAAGCAATATCATACAAGGACGAGAAAGACTAAAGTCA
TCAGACGCTAAGCCTTTTAGCAACACCTACCAATTGCCTCTCTTTCTCTT
GTCATTGAAATCTTCCACCCAGTCCAGAACCTAAACTACACGCCCCCATA
CACCCATCGACAATGTCAACAACACCAATTCCCAAAAACAGATCCTCCAG
CCCAACAGTCTTCGAGCAGCAGCGGGCAGAATTGGTTAGGGAGATCGCAG
TGGTAAGTATTTCCCTCGCCTCTCTATTATCTAGACTATGCACTCCTTGC
AAAATACTTCCCAATTTCCATCTAATCAATAATTAAACCTCCAGGGCATG
GAACAAGTCCTTCAAAACATCAACCGGCTGAACCGGAACCTAGAGAGCAT
CATTTCCGTAAGTGCATGACCCAAACAGACGGGTAATCACTCGCCCACCC
CCCACTTATTCTTTCTCCGATCCATTCCGCGCATGTCGATCAGCTCAGAT
CAGATCCGATCAGGTCCCGCCTATTATGTACTAAGCTGATATTATATCTG
CAGGTTGGGAATGAGTTTGGCTCTGTGGAAGCGCTGTGGTCCCAGTTCGA
GAACTTTATGGGTCGGCCTGGGGAGGAGAATGAGGCTGGGGATGGTGGGA
AGCAGAAGGCTGGTGCTAGTGGTAGTGGGGGTGGGCATCATCAGGATGAG
GAGCAGAGTCAGCTCCAGGAGGAGGACCGGTGAACGGTGAAGATGGATAG
ATGGGTCTATGATTTAGTTTTGAGGCTCGGGTTGTTATTGTGGGTACGGA
TTCGATTGGTTGATTGGTGGCGTATGGTAGAG
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Coding sequence (CDS) from alignment at ch1:3192126..3192957-

>KJC3_001246-T1 ID=KJC3_001246-T1|Name=KJC3_001246-T1|organism=Aspergillus niger KJC3|type=CDS|length=999bp|location=Sequence derived from alignment at ch1:3192126..3192957- (Aspergillus niger KJC3)
GTTGGGAATGAGTTTGGCTCTGTGGAAGCGCTGTGGTCCCAGTTCGAGAA
CTTTATGGGTCGGCCTGGGGAGGAGAATGAGGCTGGGGATGGTGGGAAGC
AGAAGGCTGGTGCTAGTGGTAGTGGGGGTGGGCATCATCAGGATGAGGAG
CAGAGTCAGCTCCAGGAGGAGGACCGGTGAGGCATGGAACAAGTCCTTCA
AAACATCAACCGGCTGAACCGGAACCTAGAGAGCATCATTTCCATGTCAA
CAACACCAATTCCCAAAAACAGATCCTCCAGCCCAACAGTCTTCGAGCAG
CAGCGGGCAGAATTGGTTAGGGAGATCGCAGTGGTTGGGAATGAGTTTGG
CTCTGTGGAAGCGCTGTGGTCCCAGTTCGAGAACTTTATGGGTCGGCCTG
GGGAGGAGAATGAGGCTGGGGATGGTGGGAAGCAGAAGGCTGGTGCTAGT
GGTAGTGGGGGTGGGCATCATCAGGATGAGGAGCAGAGTCAGCTCCAGGA
GGAGGACCGGTGAGGCATGGAACAAGTCCTTCAAAACATCAACCGGCTGA
ACCGGAACCTAGAGAGCATCATTTCCATGTCAACAACACCAATTCCCAAA
AACAGATCCTCCAGCCCAACAGTCTTCGAGCAGCAGCGGGCAGAATTGGT
TAGGGAGATCGCAGTGGTTGGGAATGAGTTTGGCTCTGTGGAAGCGCTGT
GGTCCCAGTTCGAGAACTTTATGGGTCGGCCTGGGGAGGAGAATGAGGCT
GGGGATGGTGGGAAGCAGAAGGCTGGTGCTAGTGGTAGTGGGGGTGGGCA
TCATCAGGATGAGGAGCAGAGTCAGCTCCAGGAGGAGGACCGGTGAGGCA
TGGAACAAGTCCTTCAAAACATCAACCGGCTGAACCGGAACCTAGAGAGC
ATCATTTCCATGTCAACAACACCAATTCCCAAAAACAGATCCTCCAGCCC
AACAGTCTTCGAGCAGCAGCGGGCAGAATTGGTTAGGGAGATCGCAGTG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0072686mitotic spindle
GO:0042729DASH complex
Vocabulary: Biological Process
TermDefinition
GO:0007052mitotic spindle organization
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_001246KJC3_001246Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001246-T1KJC3_001246-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001246-T1.cdsKJC3_001246-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001246-T1.utr3p1KJC3_001246-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001246-T1.exon3KJC3_001246-T1.exon3Aspergillus niger KJC3exon
KJC3_001246-T1.exon2KJC3_001246-T1.exon2Aspergillus niger KJC3exon
KJC3_001246-T1.exon1KJC3_001246-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001246-T1.utr5p1KJC3_001246-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR013958
DBxrefPFAM:PF08649
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch1supercontigch1:3192126..3192957 -
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