You are here

Home

KJC3_001254-T1, KJC3_001254-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_001254-T1
Unique NameKJC3_001254-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch1:3215717..3218421+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_001254-T1 ID=KJC3_001254-T1|Name=KJC3_001254-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2705bp|location=Sequence derived from alignment at ch1:3215717..3218421+ (Aspergillus niger KJC3)
CCGGGTGAATCTTATTAAATCCATCCCATGCTAATATTACGCAGACTAAG
CTACAAGCTACGGTTTCGGGGGGGTTCCGCAGTCTGCAGGCCGAACGGGG
GATATTCACCCCCCTCGAGTCGGGTCAGATGTACCAAAACAAAAGGATCA
GGATCCTTCCATTTGCTTCCCGATCGGTCGATAGGGCAGCTTGAGCGAGA
CTTGACTAATCTGGCCTATTGCTTCCCCTCAACATTCGCCCCGGATCCGA
GATGGGTGGCCCGGAGGTTGTACTTATCGACGGCGTCCCCTCGGTGCCTT
TCCCTCTTCTCTGATCCTACTATTCATACTGCCTCAATACAGCTATATCT
TATACAGCTTCCTCCCAAACGCCACTCATTTCCATTCTGCTTCTTCTCTG
ATTCATCCTCGAACAACTGAGCTGCTTGCTTTTACTGAGTGCGGCTAGTC
AAGCTATGCCCGCTATGACCATTACACTGAGTGACCAGACACATACTGTG
TCTGAGACCTCATCGACGAACAATGGCATCTCAGGGACAGAATCCAAGAA
GTCAGGCACTCGGAATGGCCATCCCCAGAGCAACTGCCACCAGCTGCCGC
CTCCCCCATCGCAACCCACTGCGGAGGGGGAATACCGGTGCGGAATCTGC
AACAAGACATACAGTCGACGTAGGCTACTCTTTTCTTTATGGTTGCACAG
TGTTGACACATTTTCTCCATGACTACTGGCTCCCTTGATCATTCTCAGAG
AGACGGCCACTTAATGCACACATGTGTGGTTAACAAGATAATAGGTGATC
TGCGGGACCGGCACCGTCGCCGTTGTATTAAGAACATTGGCCAGGAACGC
CAGTCCAAGCGCAAATCCTGCGACGCCTGTGCGCAGAAGAAGCTGCGGTG
TTCCATGACCCGGCCCTCCTGTAGCCGATGTATCCAAAGCCGACGGCCTT
GCGTGTATCCGCAGTCTTCTATTCCTGTTCAAGCTCCCAATCTTGATGAT
GCTCAAGATAATATTGTTACGTCTTCCGGCTCCCTTCACTCAGTTTCGGT
CTGCGCCGGTATAATACCTGGTGGCACGACATGGGCCCTTCCCACATATC
CGTTCGACACCCCGTCTACTGCCGACGAAGTAAATGATGTTTCGGGCTCC
TCCTGGAGTCCCGAAACTCCAACAAATGCCGAACTTGCGTTCCAAACCGT
TAACGAGAGTACTATGTTTCCCATGCAAGATGTCTCGTTGATGAACTCCC
CGCCCTGGCAAGAGGATCTCCATGAACGGCCCGAAACCCTTGGGCTGGAG
GAGTTCTTTTCCGGGTCGCTTGACAGTTGTTCGCCAGCTATGTATATACC
ACCGACGATGGGGTCCTCTCCAGTGACCATGGTACCTCCTACCCCGGCTA
CTCTCCCGGGCGACTCTTATGCTACGGGAGGCGGACTGAGTATGTCATCG
GTATCCCCTGGCTATTTCGATAATTTCTGGCCCGATAACATGGCGTCCAC
CGATGAAGACCACGAAACTTGGCGATTCGGCACGTACACAGATAGCCGGT
CCGGATCGGGGTTCGGCCAAAACTTCCTGCCCAAAACAAGTCATCATAGC
CCGGGTGACATCGGTGATCTCTATCAAGAGCTGTTCAGCTTGTTACGTGA
GTACCCCGGGCTGGCACTGCAGAGACAGTTCTACTCGCCTTTCCTACACC
ACGAGCTACAAGGGTATGCGATGCAATCGTTGGGCCAGCCAATTAGCACT
ATTCTGAGTTCGATATCATCCTATGCTAGTTATCTGGAGGCTTGTGATAC
ATTTGATTTGTCAATGCACGATGGGGAGCGGCTCGCAGCAGCAGAAGGCT
GCGTGGTAGCGCTTCATGCTGTCTGTGTTCAACAGATCCTGAGCATTTTC
GGCGATAACTTCGCCACCACCGGCTTCAGCAAGCTCCCAAATTTTGCAGG
CGATCAAGGGCATACCGAGACTCCTGTTGACATTCTCTTGAGGGTATGTT
TCCCCCCACTCCGATTGCCCTACGCCCCACCCTATGATTTGAGCTGACCT
GAGTGGCCCTAGATGACGCAGCGGGTCTACAAACTTCATGAGGACGTTCT
TCGCACCCCCCATGAAGATGAAACAGATTGGCGCCGATGGAAATTCGCCG
AATCCCTGCGACGTAATATTTTCTTCGCCAATATAATCCGAACATTAGCA
GGACGGGCCCGCCGTTACAACGGGATCAACATTGACCCGCTAGATAGCGC
GATCCTTCTTCAGCTGCCGTTGCCGGCGCCGGAGGAAATGTGGCGAGCAC
GCAGCGAGGGGGAGTGGATGATAGCCCGCGCACAGACGCAGCGGTCGTGG
GCGCGGGGCGTGGATGGCAGCATGCTGCCAGCCCTGCGGACCCTACAACA
GCTGCTGGTGCTGGAAGAGGTTGGCAGTGTAAGTGTTACGTTATTGCTTC
CCATCACACGCATGATTCTGGCGTGTGCCAAGCTCAATGGAGCTTCATAT
GGCTGAGGTGGACCGGTGGGCCCCGCGATAGGGCGATTATGATCGTCACG
GATGAATTTCTTTTTGCATGATTTTCCTGTTTCCAAAATACCCTGTTCTT
CTCACGAAGACTACGATCATCGTGGGATGTATTAGTTTTGTATCCGCTAG
AGAGTAGAGACTAGATCCTGATTGCAAGGCTTTATGATTATGATTCTCAG
TGTTG
back to top

Coding sequence (CDS) from alignment at ch1:3215717..3218421+

>KJC3_001254-T1 ID=KJC3_001254-T1|Name=KJC3_001254-T1|organism=Aspergillus niger KJC3|type=CDS|length=5571bp|location=Sequence derived from alignment at ch1:3215717..3218421+ (Aspergillus niger KJC3)
ATGCCCGCTATGACCATTACACTGAGTGACCAGACACATACTGTGTCTGA
GACCTCATCGACGAACAATGGCATCTCAGGGACAGAATCCAAGAAGTCAG
GCACTCGGAATGGCCATCCCCAGAGCAACTGCCACCAGCTGCCGCCTCCC
CCATCGCAACCCACTGCGGAGGGGGAATACCGGTGCGGAATCTGCAACAA
GACATACAGTCGACGTGATCTGCGGGACCGGCACCGTCGCCGTTGTATTA
AGAACATTGGCCAGGAACGCCAGTCCAAGCGCAAATCCTGCGACGCCTGT
GCGCAGAAGAAGCTGCGGTGTTCCATGACCCGGCCCTCCTGTAGCCGATG
TATCCAAAGCCGACGGCCTTGCGTGTATCCGCAGTCTTCTATTCCTGTTC
AAGCTCCCAATCTTGATGATGCTCAAGATAATATTGTTACGTCTTCCGGC
TCCCTTCACTCAGTTTCGGTCTGCGCCGGTATAATACCTGGTGGCACGAC
ATGGGCCCTTCCCACATATCCGTTCGACACCCCGTCTACTGCCGACGAAG
TAAATGATGTTTCGGGCTCCTCCTGGAGTCCCGAAACTCCAACAAATGCC
GAACTTGCGTTCCAAACCGTTAACGAGAGTACTATGTTTCCCATGCAAGA
TGTCTCGTTGATGAACTCCCCGCCCTGGCAAGAGGATCTCCATGAACGGC
CCGAAACCCTTGGGCTGGAGGAGTTCTTTTCCGGGTCGCTTGACAGTTGT
TCGCCAGCTATGTATATACCACCGACGATGGGGTCCTCTCCAGTGACCAT
GGTACCTCCTACCCCGGCTACTCTCCCGGGCGACTCTTATGCTACGGGAG
GCGGACTGAGTATGTCATCGGTATCCCCTGGCTATTTCGATAATTTCTGG
CCCGATAACATGGCGTCCACCGATGAAGACCACGAAACTTGGCGATTCGG
CACGTACACAGATAGCCGGTCCGGATCGGGGTTCGGCCAAAACTTCCTGC
CCAAAACAAGTCATCATAGCCCGGGTGACATCGGTGATCTCTATCAAGAG
CTGTTCAGCTTGTTACGTGAGTACCCCGGGCTGGCACTGCAGAGACAGTT
CTACTCGCCTTTCCTACACCACGAGCTACAAGGGTATGCGATGCAATCGT
TGGGCCAGCCAATTAGCACTATTCTGAGTTCGATATCATCCTATGCTAGT
TATCTGGAGGCTTGTGATACATTTGATTTGTCAATGCACGATGGGGAGCG
GCTCGCAGCAGCAGAAGGCTGCGTGGTAGCGCTTCATGCTGTCTGTGTTC
AACAGATCCTGAGCATTTTCGGCGATAACTTCGCCACCACCGGCTTCAGC
AAGCTCCCAAATTTTGCAGGCGATCAAGGGCATACCGAGACTCCTGTTGA
CATTCTCTTGAGGATGACGCAGCGGGTCTACAAACTTCATGAGGACGTTC
TTCGCACCCCCCATGAAGATGAAACAGATTGGCGCCGATGGAAATTCGCC
GAATCCCTGCGACGTAATATTTTCTTCGCCAATATAATCCGAACATTAGC
AGGACGGGCCCGCCGTTACAACGGGATCAACATTGACCCGCTAGATAGCG
CGATCCTTCTTCAGCTGCCGTTGCCGGCGCCGGAGGAAATGTGGCGAGCA
CGCAGCGAGGGGGAGTGGATGATAGCCCGCGCACAGACGCAGCGGTCGTG
GGCGCGGGGCGTGGATGGCAGCATGCTGCCAGCCCTGCGGACCCTACAAC
AGCTGCTGGTGCTGGAAGAGGTTGGCAGTGTAAGTGTTACGTTATTGCTT
CCCATCACACGCATGATTCTGGCGTGTGCCAAGCTCAATGGAGCTTCATA
TGGCTGAATGCCCGCTATGACCATTACACTGAGTGACCAGACACATACTG
TGTCTGAGACCTCATCGACGAACAATGGCATCTCAGGGACAGAATCCAAG
AAGTCAGGCACTCGGAATGGCCATCCCCAGAGCAACTGCCACCAGCTGCC
GCCTCCCCCATCGCAACCCACTGCGGAGGGGGAATACCGGTGCGGAATCT
GCAACAAGACATACAGTCGACGTGATCTGCGGGACCGGCACCGTCGCCGT
TGTATTAAGAACATTGGCCAGGAACGCCAGTCCAAGCGCAAATCCTGCGA
CGCCTGTGCGCAGAAGAAGCTGCGGTGTTCCATGACCCGGCCCTCCTGTA
GCCGATGTATCCAAAGCCGACGGCCTTGCGTGTATCCGCAGTCTTCTATT
CCTGTTCAAGCTCCCAATCTTGATGATGCTCAAGATAATATTGTTACGTC
TTCCGGCTCCCTTCACTCAGTTTCGGTCTGCGCCGGTATAATACCTGGTG
GCACGACATGGGCCCTTCCCACATATCCGTTCGACACCCCGTCTACTGCC
GACGAAGTAAATGATGTTTCGGGCTCCTCCTGGAGTCCCGAAACTCCAAC
AAATGCCGAACTTGCGTTCCAAACCGTTAACGAGAGTACTATGTTTCCCA
TGCAAGATGTCTCGTTGATGAACTCCCCGCCCTGGCAAGAGGATCTCCAT
GAACGGCCCGAAACCCTTGGGCTGGAGGAGTTCTTTTCCGGGTCGCTTGA
CAGTTGTTCGCCAGCTATGTATATACCACCGACGATGGGGTCCTCTCCAG
TGACCATGGTACCTCCTACCCCGGCTACTCTCCCGGGCGACTCTTATGCT
ACGGGAGGCGGACTGAGTATGTCATCGGTATCCCCTGGCTATTTCGATAA
TTTCTGGCCCGATAACATGGCGTCCACCGATGAAGACCACGAAACTTGGC
GATTCGGCACGTACACAGATAGCCGGTCCGGATCGGGGTTCGGCCAAAAC
TTCCTGCCCAAAACAAGTCATCATAGCCCGGGTGACATCGGTGATCTCTA
TCAAGAGCTGTTCAGCTTGTTACGTGAGTACCCCGGGCTGGCACTGCAGA
GACAGTTCTACTCGCCTTTCCTACACCACGAGCTACAAGGGTATGCGATG
CAATCGTTGGGCCAGCCAATTAGCACTATTCTGAGTTCGATATCATCCTA
TGCTAGTTATCTGGAGGCTTGTGATACATTTGATTTGTCAATGCACGATG
GGGAGCGGCTCGCAGCAGCAGAAGGCTGCGTGGTAGCGCTTCATGCTGTC
TGTGTTCAACAGATCCTGAGCATTTTCGGCGATAACTTCGCCACCACCGG
CTTCAGCAAGCTCCCAAATTTTGCAGGCGATCAAGGGCATACCGAGACTC
CTGTTGACATTCTCTTGAGGATGACGCAGCGGGTCTACAAACTTCATGAG
GACGTTCTTCGCACCCCCCATGAAGATGAAACAGATTGGCGCCGATGGAA
ATTCGCCGAATCCCTGCGACGTAATATTTTCTTCGCCAATATAATCCGAA
CATTAGCAGGACGGGCCCGCCGTTACAACGGGATCAACATTGACCCGCTA
GATAGCGCGATCCTTCTTCAGCTGCCGTTGCCGGCGCCGGAGGAAATGTG
GCGAGCACGCAGCGAGGGGGAGTGGATGATAGCCCGCGCACAGACGCAGC
GGTCGTGGGCGCGGGGCGTGGATGGCAGCATGCTGCCAGCCCTGCGGACC
CTACAACAGCTGCTGGTGCTGGAAGAGGTTGGCAGTGTAAGTGTTACGTT
ATTGCTTCCCATCACACGCATGATTCTGGCGTGTGCCAAGCTCAATGGAG
CTTCATATGGCTGAATGCCCGCTATGACCATTACACTGAGTGACCAGACA
CATACTGTGTCTGAGACCTCATCGACGAACAATGGCATCTCAGGGACAGA
ATCCAAGAAGTCAGGCACTCGGAATGGCCATCCCCAGAGCAACTGCCACC
AGCTGCCGCCTCCCCCATCGCAACCCACTGCGGAGGGGGAATACCGGTGC
GGAATCTGCAACAAGACATACAGTCGACGTGATCTGCGGGACCGGCACCG
TCGCCGTTGTATTAAGAACATTGGCCAGGAACGCCAGTCCAAGCGCAAAT
CCTGCGACGCCTGTGCGCAGAAGAAGCTGCGGTGTTCCATGACCCGGCCC
TCCTGTAGCCGATGTATCCAAAGCCGACGGCCTTGCGTGTATCCGCAGTC
TTCTATTCCTGTTCAAGCTCCCAATCTTGATGATGCTCAAGATAATATTG
TTACGTCTTCCGGCTCCCTTCACTCAGTTTCGGTCTGCGCCGGTATAATA
CCTGGTGGCACGACATGGGCCCTTCCCACATATCCGTTCGACACCCCGTC
TACTGCCGACGAAGTAAATGATGTTTCGGGCTCCTCCTGGAGTCCCGAAA
CTCCAACAAATGCCGAACTTGCGTTCCAAACCGTTAACGAGAGTACTATG
TTTCCCATGCAAGATGTCTCGTTGATGAACTCCCCGCCCTGGCAAGAGGA
TCTCCATGAACGGCCCGAAACCCTTGGGCTGGAGGAGTTCTTTTCCGGGT
CGCTTGACAGTTGTTCGCCAGCTATGTATATACCACCGACGATGGGGTCC
TCTCCAGTGACCATGGTACCTCCTACCCCGGCTACTCTCCCGGGCGACTC
TTATGCTACGGGAGGCGGACTGAGTATGTCATCGGTATCCCCTGGCTATT
TCGATAATTTCTGGCCCGATAACATGGCGTCCACCGATGAAGACCACGAA
ACTTGGCGATTCGGCACGTACACAGATAGCCGGTCCGGATCGGGGTTCGG
CCAAAACTTCCTGCCCAAAACAAGTCATCATAGCCCGGGTGACATCGGTG
ATCTCTATCAAGAGCTGTTCAGCTTGTTACGTGAGTACCCCGGGCTGGCA
CTGCAGAGACAGTTCTACTCGCCTTTCCTACACCACGAGCTACAAGGGTA
TGCGATGCAATCGTTGGGCCAGCCAATTAGCACTATTCTGAGTTCGATAT
CATCCTATGCTAGTTATCTGGAGGCTTGTGATACATTTGATTTGTCAATG
CACGATGGGGAGCGGCTCGCAGCAGCAGAAGGCTGCGTGGTAGCGCTTCA
TGCTGTCTGTGTTCAACAGATCCTGAGCATTTTCGGCGATAACTTCGCCA
CCACCGGCTTCAGCAAGCTCCCAAATTTTGCAGGCGATCAAGGGCATACC
GAGACTCCTGTTGACATTCTCTTGAGGATGACGCAGCGGGTCTACAAACT
TCATGAGGACGTTCTTCGCACCCCCCATGAAGATGAAACAGATTGGCGCC
GATGGAAATTCGCCGAATCCCTGCGACGTAATATTTTCTTCGCCAATATA
ATCCGAACATTAGCAGGACGGGCCCGCCGTTACAACGGGATCAACATTGA
CCCGCTAGATAGCGCGATCCTTCTTCAGCTGCCGTTGCCGGCGCCGGAGG
AAATGTGGCGAGCACGCAGCGAGGGGGAGTGGATGATAGCCCGCGCACAG
ACGCAGCGGTCGTGGGCGCGGGGCGTGGATGGCAGCATGCTGCCAGCCCT
GCGGACCCTACAACAGCTGCTGGTGCTGGAAGAGGTTGGCAGTGTAAGTG
TTACGTTATTGCTTCCCATCACACGCATGATTCTGGCGTGTGCCAAGCTC
AATGGAGCTTCATATGGCTGA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0042025host cell nucleus
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
Vocabulary: Molecular Function
TermDefinition
GO:0008270zinc ion binding
GO:0000981DNA-binding transcription factor activity, RNA polymerase II-specific
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_001254KJC3_001254Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001254-T1KJC3_001254-T1-proteinAspergillus niger KJC3polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001254-T1.utr5p1KJC3_001254-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001254-T1.exon1KJC3_001254-T1.exon1Aspergillus niger KJC3exon
KJC3_001254-T1.exon2KJC3_001254-T1.exon2Aspergillus niger KJC3exon
KJC3_001254-T1.exon3KJC3_001254-T1.exon3Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001254-T1.cdsKJC3_001254-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001254-T1.utr3p1KJC3_001254-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR013087
DBxrefInterPro:IPR036864
DBxrefInterPro:IPR001138
DBxrefPFAM:PF00172
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch1supercontigch1:3215717..3218421 +
Powered by Drupal