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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch1:3228821..3231554- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_001256-T1 ID=KJC3_001256-T1|Name=KJC3_001256-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2734bp|location=Sequence derived from alignment at ch1:3228821..3231554- (Aspergillus niger KJC3)
CAACCCCCGTCAAGGCCAACAACGAGCCGGTCAAGCTTGTGAATTAAGGG
GATCCATTCTGCCAGGGTTGACTAGGCTCCATGACAGTTTGCCGGAGCCC
GCGGCATCACAGGCTTTTCACAGACGCTGCTTCCCAGCCCACTTTCCAGC
GTTCTCCTTTATGCCGAATACCCTATTGTGGTTTGGCTCGGACACGGCGA
TCACTAATCCCTCACTCGGATCCTTGGCGAGTGGTTCTGCAGCACCATGA
CAGATAGTGCGTGGTCGCCACAGCCTATATGCAGCCAGGATCTAATGCAT
AGGTAGTGCGAGGAGCTATTGGAACGAGCGCCCGGGGAGGAAGCAATAAT
CGGCGATGGTTATTACTCCTGGTTATCTCCATTGTTCGTTCGAGATATTT
CCGACGCCCTGCAGCCATGTCTCCGCGGCTAGCCCGGAGGGGAGGAGGGA
TTTGAGAATCAATTATCCAATAGTAATTATGAAAAAATATTGGCATTGCA
GATGGACACCCCCGTCGAACCCCAGTTTCGGCGTCGAAATGAGACACTCT
TAGCTACTGGGATCCGCCTACGGGTGTCAATTTTTCAGAACCATGGTCCA
CGGACGCCGCCGCCGCAACACCACCGAGTGTATTTGGCACGATACTACAT
ATCTAGACTAGACCACGATCGCGTGCGACGCCCCAGTGGCAAGCAGCCAC
GCCGATCCAATGCAAGGTGCATCTTTGCTTCTCCCTGTCCATCATCTCCC
AAAACAGGTAGACGTTATGACCTCTGGGGCCTATCACGATCGATCCGCTC
GGATACTCCATGGTCGCCTCCCAGTCCGACTGCATCGGGGAGTTGCTGTA
TCCCTTTAAGGTTTTTCTATCTACACCTGGGCGGGACGATCGTGACCCAG
TGCCATTGAAGTCATTTCTCGGATTGTTACTCCCAGCTTCCGACCCAAAG
TTGAGAGCCTCTCTAGGCGACTTCATGGGCCTATCATAGACGGCGCAGCG
CCAGCTTGACCCCGGGCGACGACACTGTGCGCATTGACAGACCAAGCGCC
TCTAACTTGAACCTATTTATAAATGTTTGTGGACTCCCCACGGTCGTCGG
GGTCAGTGTCTTGCTCCATGTTGTTTCTTCCTGCTTGAAGAGGCTGCATT
GACCACTGGCACGCACGCCATGACTGTCAGTCATCCCAAAGATGTTTTGA
ACACCATCAATTTCGTCACACAATGTTTGTGTATACCGATCATTACTATC
TTCGTTCTCTTGCGTTTCTCTATCCGTATTTACTACAAACAGTTCGTAGG
CGTGGAAGACTGTATGTCTGCTTGACTTCTCTTCTAGAAAACACTGCTAA
CTCTCCCAGGGTCATGTCTTACAGCATGGGTGCGTTTGAGACTGCAGGTC
CCTTCATAGGGCGATTCACTGACTATTGCAGGTTCTGTTTATGGGATACT
GTGGCATTGCTATTGCCGGTATGTATCGTTCTTACCTCTCCAGCAGCTCC
AACTAACTTGACTCTAGTGGGTCACTATGGCGGGGGTTACCACATCGATG
ATGTCTCTGAAGCACACCAGGTTCTCTTTCGCAAGGTATGAAAGCTCAGT
TACCAGAGGGGAGATAAGTTGCATTAGCTAATTGAGGATCAATCCAGTTC
TGTTATATCGCCACCGTTCTTTACTGCCCCATGGCACTCTTCGTCAAGAT
CGCACTCCTTTCTATCCTCATCCGCATCTTCAATCCTTACCGTTCCAAAA
TTTACTTCATCTACGGCCTTCTTGGCTGTCTCTGCATATACTACATTGTC
GCCGAGATCGTCAAGATTCGCATGTGCGACCCGGTTCCGGCATACTGGAC
GCAGGATCCAAAGGCACGTTGTCTCAATCAACGGGCCGCCCTGATCGCCG
ACTCTGTCATCAGTGTGGTGACCGACTTTATCATCTTGATTTTACCTCTT
CCCCTCACCTGGTCGCTGCAGATGTCCCGGAATAAGAAGTTGCGGGTCAT
CGGCATGTTGTCGGCGGGTGGTCTGGCCACGGCCTTCAGTTTGTACCGGT
TGGTTCTGGTCTTGCGTGACGGTAGTTCCAGGGACCAGACTATTGTCTTT
ATGATCGTGATTCTGTCAGGGTAAGTTGTTGTTTGGGAATAATCAACGTC
ACAGACTAACCCCCCAACTAGAAACGCCGAAGGAGGCGTGGCCATGATCT
GCGCTTGTCTGCCCACGGTCAACATCCTCATCAACAAACTCCGCAAGAAG
GAGTACAGCTCTCAACGCTATTACGAACCGGAGTCCTCTGTCAACCTTAG
CAAACTCAAAGGAAGCAACAAGCGATTCTCCCTCGGTAATTCCCGTCGCG
CCGATGGCACCGAGTCCGCCTCCGACCAGTCACATCTGATTACATTTGCA
GGGACGGTCGATATGGCAGGTGGTAATGACGCTGGAGGCATTCACAAGAC
GGTGGACGTGTCACAGACGATAGAGATGGTGGCCGATGGTGATAGTCATG
AAAGCCACCATCATGGCAGTTTTCACTAATGATTGTATACCCTGGGTGGG
CGGCTTTGTGTTTTTCTGGCTGTATGGTGTTCGGTTAATGACTTCGCCCG
AACTATGGTTTAGCGATAGACTACACTCTTTAATATTTCCTTTTCTAATG
AATTTCTATTCATGCAAAAATGACTGCCTGTGAATGCTTCCCGCCTTTAT
CGCCAACAACGAAAGAACTAATATAGATGCCGAG back to topCoding sequence (CDS) from alignment at ch1:3228821..3231554- >KJC3_001256-T1 ID=KJC3_001256-T1|Name=KJC3_001256-T1|organism=Aspergillus niger KJC3|type=CDS|length=6588bp|location=Sequence derived from alignment at ch1:3228821..3231554- (Aspergillus niger KJC3)
AAACGCCGAAGGAGGCGTGGCCATGATCTGCGCTTGTCTGCCCACGGTCA
ACATCCTCATCAACAAACTCCGCAAGAAGGAGTACAGCTCTCAACGCTAT
TACGAACCGGAGTCCTCTGTCAACCTTAGCAAACTCAAAGGAAGCAACAA
GCGATTCTCCCTCGGTAATTCCCGTCGCGCCGATGGCACCGAGTCCGCCT
CCGACCAGTCACATCTGATTACATTTGCAGGGACGGTCGATATGGCAGGT
GGTAATGACGCTGGAGGCATTCACAAGACGGTGGACGTGTCACAGACGAT
AGAGATGGTGGCCGATGGTGATAGTCATGAAAGCCACCATCATGGCAGTT
TTCACTAATTCTGTTATATCGCCACCGTTCTTTACTGCCCCATGGCACTC
TTCGTCAAGATCGCACTCCTTTCTATCCTCATCCGCATCTTCAATCCTTA
CCGTTCCAAAATTTACTTCATCTACGGCCTTCTTGGCTGTCTCTGCATAT
ACTACATTGTCGCCGAGATCGTCAAGATTCGCATGTGCGACCCGGTTCCG
GCATACTGGACGCAGGATCCAAAGGCACGTTGTCTCAATCAACGGGCCGC
CCTGATCGCCGACTCTGTCATCAGTGTGGTGACCGACTTTATCATCTTGA
TTTTACCTCTTCCCCTCACCTGGTCGCTGCAGATGTCCCGGAATAAGAAG
TTGCGGGTCATCGGCATGTTGTCGGCGGGTGGTCTGGCCACGGCCTTCAG
TTTGTACCGGTTGGTTCTGGTCTTGCGTGACGGTAGTTCCAGGGACCAGA
CTATTGTCTTTATGATCGTGATTCTGTCAGGTGGGTCACTATGGCGGGGG
TTACCACATCGATGATGTCTCTGAAGCACACCAGGTTCTCTTTCGCAAGG
TTCTGTTTATGGGATACTGTGGCATTGCTATTGCCGGGTCATGTCTTACA
GCATGGATGACTGTCAGTCATCCCAAAGATGTTTTGAACACCATCAATTT
CGTCACACAATGTTTGTGTATACCGATCATTACTATCTTCGTTCTCTTGC
GTTTCTCTATCCGTATTTACTACAAACAGTTCGTAGGCGTGGAAGACTAA
ACGCCGAAGGAGGCGTGGCCATGATCTGCGCTTGTCTGCCCACGGTCAAC
ATCCTCATCAACAAACTCCGCAAGAAGGAGTACAGCTCTCAACGCTATTA
CGAACCGGAGTCCTCTGTCAACCTTAGCAAACTCAAAGGAAGCAACAAGC
GATTCTCCCTCGGTAATTCCCGTCGCGCCGATGGCACCGAGTCCGCCTCC
GACCAGTCACATCTGATTACATTTGCAGGGACGGTCGATATGGCAGGTGG
TAATGACGCTGGAGGCATTCACAAGACGGTGGACGTGTCACAGACGATAG
AGATGGTGGCCGATGGTGATAGTCATGAAAGCCACCATCATGGCAGTTTT
CACTAATTCTGTTATATCGCCACCGTTCTTTACTGCCCCATGGCACTCTT
CGTCAAGATCGCACTCCTTTCTATCCTCATCCGCATCTTCAATCCTTACC
GTTCCAAAATTTACTTCATCTACGGCCTTCTTGGCTGTCTCTGCATATAC
TACATTGTCGCCGAGATCGTCAAGATTCGCATGTGCGACCCGGTTCCGGC
ATACTGGACGCAGGATCCAAAGGCACGTTGTCTCAATCAACGGGCCGCCC
TGATCGCCGACTCTGTCATCAGTGTGGTGACCGACTTTATCATCTTGATT
TTACCTCTTCCCCTCACCTGGTCGCTGCAGATGTCCCGGAATAAGAAGTT
GCGGGTCATCGGCATGTTGTCGGCGGGTGGTCTGGCCACGGCCTTCAGTT
TGTACCGGTTGGTTCTGGTCTTGCGTGACGGTAGTTCCAGGGACCAGACT
ATTGTCTTTATGATCGTGATTCTGTCAGGTGGGTCACTATGGCGGGGGTT
ACCACATCGATGATGTCTCTGAAGCACACCAGGTTCTCTTTCGCAAGGTT
CTGTTTATGGGATACTGTGGCATTGCTATTGCCGGGTCATGTCTTACAGC
ATGGATGACTGTCAGTCATCCCAAAGATGTTTTGAACACCATCAATTTCG
TCACACAATGTTTGTGTATACCGATCATTACTATCTTCGTTCTCTTGCGT
TTCTCTATCCGTATTTACTACAAACAGTTCGTAGGCGTGGAAGACTAAAC
GCCGAAGGAGGCGTGGCCATGATCTGCGCTTGTCTGCCCACGGTCAACAT
CCTCATCAACAAACTCCGCAAGAAGGAGTACAGCTCTCAACGCTATTACG
AACCGGAGTCCTCTGTCAACCTTAGCAAACTCAAAGGAAGCAACAAGCGA
TTCTCCCTCGGTAATTCCCGTCGCGCCGATGGCACCGAGTCCGCCTCCGA
CCAGTCACATCTGATTACATTTGCAGGGACGGTCGATATGGCAGGTGGTA
ATGACGCTGGAGGCATTCACAAGACGGTGGACGTGTCACAGACGATAGAG
ATGGTGGCCGATGGTGATAGTCATGAAAGCCACCATCATGGCAGTTTTCA
CTAATTCTGTTATATCGCCACCGTTCTTTACTGCCCCATGGCACTCTTCG
TCAAGATCGCACTCCTTTCTATCCTCATCCGCATCTTCAATCCTTACCGT
TCCAAAATTTACTTCATCTACGGCCTTCTTGGCTGTCTCTGCATATACTA
CATTGTCGCCGAGATCGTCAAGATTCGCATGTGCGACCCGGTTCCGGCAT
ACTGGACGCAGGATCCAAAGGCACGTTGTCTCAATCAACGGGCCGCCCTG
ATCGCCGACTCTGTCATCAGTGTGGTGACCGACTTTATCATCTTGATTTT
ACCTCTTCCCCTCACCTGGTCGCTGCAGATGTCCCGGAATAAGAAGTTGC
GGGTCATCGGCATGTTGTCGGCGGGTGGTCTGGCCACGGCCTTCAGTTTG
TACCGGTTGGTTCTGGTCTTGCGTGACGGTAGTTCCAGGGACCAGACTAT
TGTCTTTATGATCGTGATTCTGTCAGGTGGGTCACTATGGCGGGGGTTAC
CACATCGATGATGTCTCTGAAGCACACCAGGTTCTCTTTCGCAAGGTTCT
GTTTATGGGATACTGTGGCATTGCTATTGCCGGGTCATGTCTTACAGCAT
GGATGACTGTCAGTCATCCCAAAGATGTTTTGAACACCATCAATTTCGTC
ACACAATGTTTGTGTATACCGATCATTACTATCTTCGTTCTCTTGCGTTT
CTCTATCCGTATTTACTACAAACAGTTCGTAGGCGTGGAAGACTAAACGC
CGAAGGAGGCGTGGCCATGATCTGCGCTTGTCTGCCCACGGTCAACATCC
TCATCAACAAACTCCGCAAGAAGGAGTACAGCTCTCAACGCTATTACGAA
CCGGAGTCCTCTGTCAACCTTAGCAAACTCAAAGGAAGCAACAAGCGATT
CTCCCTCGGTAATTCCCGTCGCGCCGATGGCACCGAGTCCGCCTCCGACC
AGTCACATCTGATTACATTTGCAGGGACGGTCGATATGGCAGGTGGTAAT
GACGCTGGAGGCATTCACAAGACGGTGGACGTGTCACAGACGATAGAGAT
GGTGGCCGATGGTGATAGTCATGAAAGCCACCATCATGGCAGTTTTCACT
AATTCTGTTATATCGCCACCGTTCTTTACTGCCCCATGGCACTCTTCGTC
AAGATCGCACTCCTTTCTATCCTCATCCGCATCTTCAATCCTTACCGTTC
CAAAATTTACTTCATCTACGGCCTTCTTGGCTGTCTCTGCATATACTACA
TTGTCGCCGAGATCGTCAAGATTCGCATGTGCGACCCGGTTCCGGCATAC
TGGACGCAGGATCCAAAGGCACGTTGTCTCAATCAACGGGCCGCCCTGAT
CGCCGACTCTGTCATCAGTGTGGTGACCGACTTTATCATCTTGATTTTAC
CTCTTCCCCTCACCTGGTCGCTGCAGATGTCCCGGAATAAGAAGTTGCGG
GTCATCGGCATGTTGTCGGCGGGTGGTCTGGCCACGGCCTTCAGTTTGTA
CCGGTTGGTTCTGGTCTTGCGTGACGGTAGTTCCAGGGACCAGACTATTG
TCTTTATGATCGTGATTCTGTCAGGTGGGTCACTATGGCGGGGGTTACCA
CATCGATGATGTCTCTGAAGCACACCAGGTTCTCTTTCGCAAGGTTCTGT
TTATGGGATACTGTGGCATTGCTATTGCCGGGTCATGTCTTACAGCATGG
ATGACTGTCAGTCATCCCAAAGATGTTTTGAACACCATCAATTTCGTCAC
ACAATGTTTGTGTATACCGATCATTACTATCTTCGTTCTCTTGCGTTTCT
CTATCCGTATTTACTACAAACAGTTCGTAGGCGTGGAAGACTAAACGCCG
AAGGAGGCGTGGCCATGATCTGCGCTTGTCTGCCCACGGTCAACATCCTC
ATCAACAAACTCCGCAAGAAGGAGTACAGCTCTCAACGCTATTACGAACC
GGAGTCCTCTGTCAACCTTAGCAAACTCAAAGGAAGCAACAAGCGATTCT
CCCTCGGTAATTCCCGTCGCGCCGATGGCACCGAGTCCGCCTCCGACCAG
TCACATCTGATTACATTTGCAGGGACGGTCGATATGGCAGGTGGTAATGA
CGCTGGAGGCATTCACAAGACGGTGGACGTGTCACAGACGATAGAGATGG
TGGCCGATGGTGATAGTCATGAAAGCCACCATCATGGCAGTTTTCACTAA
TTCTGTTATATCGCCACCGTTCTTTACTGCCCCATGGCACTCTTCGTCAA
GATCGCACTCCTTTCTATCCTCATCCGCATCTTCAATCCTTACCGTTCCA
AAATTTACTTCATCTACGGCCTTCTTGGCTGTCTCTGCATATACTACATT
GTCGCCGAGATCGTCAAGATTCGCATGTGCGACCCGGTTCCGGCATACTG
GACGCAGGATCCAAAGGCACGTTGTCTCAATCAACGGGCCGCCCTGATCG
CCGACTCTGTCATCAGTGTGGTGACCGACTTTATCATCTTGATTTTACCT
CTTCCCCTCACCTGGTCGCTGCAGATGTCCCGGAATAAGAAGTTGCGGGT
CATCGGCATGTTGTCGGCGGGTGGTCTGGCCACGGCCTTCAGTTTGTACC
GGTTGGTTCTGGTCTTGCGTGACGGTAGTTCCAGGGACCAGACTATTGTC
TTTATGATCGTGATTCTGTCAGGTGGGTCACTATGGCGGGGGTTACCACA
TCGATGATGTCTCTGAAGCACACCAGGTTCTCTTTCGCAAGGTTCTGTTT
ATGGGATACTGTGGCATTGCTATTGCCGGGTCATGTCTTACAGCATGGAT
GACTGTCAGTCATCCCAAAGATGTTTTGAACACCATCAATTTCGTCACAC
AATGTTTGTGTATACCGATCATTACTATCTTCGTTCTCTTGCGTTTCTCT
ATCCGTATTTACTACAAACAGTTCGTAGGCGTGGAAGACTAAACGCCGAA
GGAGGCGTGGCCATGATCTGCGCTTGTCTGCCCACGGTCAACATCCTCAT
CAACAAACTCCGCAAGAAGGAGTACAGCTCTCAACGCTATTACGAACCGG
AGTCCTCTGTCAACCTTAGCAAACTCAAAGGAAGCAACAAGCGATTCTCC
CTCGGTAATTCCCGTCGCGCCGATGGCACCGAGTCCGCCTCCGACCAGTC
ACATCTGATTACATTTGCAGGGACGGTCGATATGGCAGGTGGTAATGACG
CTGGAGGCATTCACAAGACGGTGGACGTGTCACAGACGATAGAGATGGTG
GCCGATGGTGATAGTCATGAAAGCCACCATCATGGCAGTTTTCACTAATT
CTGTTATATCGCCACCGTTCTTTACTGCCCCATGGCACTCTTCGTCAAGA
TCGCACTCCTTTCTATCCTCATCCGCATCTTCAATCCTTACCGTTCCAAA
ATTTACTTCATCTACGGCCTTCTTGGCTGTCTCTGCATATACTACATTGT
CGCCGAGATCGTCAAGATTCGCATGTGCGACCCGGTTCCGGCATACTGGA
CGCAGGATCCAAAGGCACGTTGTCTCAATCAACGGGCCGCCCTGATCGCC
GACTCTGTCATCAGTGTGGTGACCGACTTTATCATCTTGATTTTACCTCT
TCCCCTCACCTGGTCGCTGCAGATGTCCCGGAATAAGAAGTTGCGGGTCA
TCGGCATGTTGTCGGCGGGTGGTCTGGCCACGGCCTTCAGTTTGTACCGG
TTGGTTCTGGTCTTGCGTGACGGTAGTTCCAGGGACCAGACTATTGTCTT
TATGATCGTGATTCTGTCAGGTGGGTCACTATGGCGGGGGTTACCACATC
GATGATGTCTCTGAAGCACACCAGGTTCTCTTTCGCAAGGTTCTGTTTAT
GGGATACTGTGGCATTGCTATTGCCGGGTCATGTCTTACAGCATGGATGA
CTGTCAGTCATCCCAAAGATGTTTTGAACACCATCAATTTCGTCACACAA
TGTTTGTGTATACCGATCATTACTATCTTCGTTCTCTTGCGTTTCTCTAT
CCGTATTTACTACAAACAGTTCGTAGGCGTGGAAGACT back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_001256-T1.utr3p1 | KJC3_001256-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch1 | supercontig | ch1:3228821..3231554 - |
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