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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch1:3228821..3231554- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_001256-T2 ID=KJC3_001256-T2|Name=KJC3_001256-T2|organism=Aspergillus niger KJC3|type=mRNA|length=2734bp|location=Sequence derived from alignment at ch1:3228821..3231554- (Aspergillus niger KJC3)
CAACCCCCGTCAAGGCCAACAACGAGCCGGTCAAGCTTGTGAATTAAGGG
GATCCATTCTGCCAGGGTTGACTAGGCTCCATGACAGTTTGCCGGAGCCC
GCGGCATCACAGGCTTTTCACAGACGCTGCTTCCCAGCCCACTTTCCAGC
GTTCTCCTTTATGCCGAATACCCTATTGTGGTTTGGCTCGGACACGGCGA
TCACTAATCCCTCACTCGGATCCTTGGCGAGTGGTTCTGCAGCACCATGA
CAGATAGTGCGTGGTCGCCACAGCCTATATGCAGCCAGGATCTAATGCAT
AGGTAGTGCGAGGAGCTATTGGAACGAGCGCCCGGGGAGGAAGCAATAAT
CGGCGATGGTTATTACTCCTGGTTATCTCCATTGTTCGTTCGAGATATTT
CCGACGCCCTGCAGCCATGTCTCCGCGGCTAGCCCGGAGGGGAGGAGGGA
TTTGAGAATCAATTATCCAATAGTAATTATGAAAAAATATTGGCATTGCA
GATGGACACCCCCGTCGAACCCCAGTTTCGGCGTCGAAATGAGACACTCT
TAGCTACTGGGATCCGCCTACGGGTGTCAATTTTTCAGAACCATGGTCCA
CGGACGCCGCCGCCGCAACACCACCGAGTGTATTTGGCACGATACTACAT
ATCTAGACTAGACCACGATCGCGTGCGACGCCCCAGTGGCAAGCAGCCAC
GCCGATCCAATGCAAGGTGCATCTTTGCTTCTCCCTGTCCATCATCTCCC
AAAACAGGTAGACGTTATGACCTCTGGGGCCTATCACGATCGATCCGCTC
GGATACTCCATGGTCGCCTCCCAGTCCGACTGCATCGGGGAGTTGCTGTA
TCCCTTTAAGGTTTTTCTATCTACACCTGGGCGGGACGATCGTGACCCAG
TGCCATTGAAGTCATTTCTCGGATTGTTACTCCCAGCTTCCGACCCAAAG
TTGAGAGCCTCTCTAGGCGACTTCATGGGCCTATCATAGACGGCGCAGCG
CCAGCTTGACCCCGGGCGACGACACTGTGCGCATTGACAGACCAAGCGCC
TCTAACTTGAACCTATTTATAAATGTTTGTGGACTCCCCACGGTCGTCGG
GGTCAGTGTCTTGCTCCATGTTGTTTCTTCCTGCTTGAAGAGGCTGCATT
GACCACTGGCACGCACGCCATGACTGTCAGTCATCCCAAAGATGTTTTGA
ACACCATCAATTTCGTCACACAATGTTTGTGTATACCGATCATTACTATC
TTCGTTCTCTTGCGTTTCTCTATCCGTATTTACTACAAACAGTTCGTAGG
CGTGGAAGACTGTATGTCTGCTTGACTTCTCTTCTAGAAAACACTGCTAA
CTCTCCCAGGGTCATGTCTTACAGCATGGGTGCGTTTGAGACTGCAGGTC
CCTTCATAGGGCGATTCACTGACTATTGCAGGTTCTGTTTATGGGATACT
GTGGCATTGCTATTGCCGGTATGTATCGTTCTTACCTCTCCAGCAGCTCC
AACTAACTTGACTCTAGTGGGTCACTATGGCGGGGGTTACCACATCGATG
ATGTCTCTGAAGCACACCAGGTTCTCTTTCGCAAGGTATGAAAGCTCAGT
TACCAGAGGGGAGATAAGTTGCATTAGCTAATTGAGGATCAATCCAGTTC
TGTTATATCGCCACCGTTCTTTACTGCCCCATGGCACTCTTCGTCAAGAT
CGCACTCCTTTCTATCCTCATCCGCATCTTCAATCCTTACCGTTCCAAAA
TTTACTTCATCTACGGCCTTCTTGGCTGTCTCTGCATATACTACATTGTC
GCCGAGATCGTCAAGATTCGCATGTGCGACCCGGTTCCGGCATACTGGAC
GCAGGATCCAAAGGCACGTTGTCTCAATCAACGGGCCGCCCTGATCGCCG
ACTCTGTCATCAGTGTGGTGACCGACTTTATCATCTTGATTTTACCTCTT
CCCCTCACCTGGTCGCTGCAGATGTCCCGGAATAAGAAGTTGCGGGTCAT
CGGCATGTTGTCGGCGGGTGGTCTGGCCACGGCCTTCAGTTTGTACCGGT
TGGTTCTGGTCTTGCGTGACGGTAGTTCCAGGGACCAGACTATTGTCTTT
ATGATCGTGATTCTGTCAGGGTAAGTTGTTGTTTGGGAATAATCAACGTC
ACAGACTAACCCCCCAACTAGAAACGCCGAAGGAGGCGTGGCCATGATCT
GCGCTTGTCTGCCCACGGTCAACATCCTCATCAACAAACTCCGCAAGAAG
GAGTACAGCTCTCAACGCTATTACGAACCGGAGTCCTCTGTCAACCTTAG
CAAACTCAAAGGAAGCAACAAGCGATTCTCCCTCGGTAATTCCCGTCGCG
CCGATGGCACCGAGTCCGCCTCCGACCAGTCACATCTGATTACATTTGCA
GGGACGGTCGATATGGCAGGTGGTAATGACGCTGGAGGCATTCACAAGAC
GGTGGACGTGTCACAGACGATAGAGATGGTGGCCGATGGTGATAGTCATG
AAAGCCACCATCATGGCAGTTTTCACTAATGATTGTATACCCTGGGTGGG
CGGCTTTGTGTTTTTCTGGCTGTATGGTGTTCGGTTAATGACTTCGCCCG
AACTATGGTTTAGCGATAGACTACACTCTTTAATATTTCCTTTTCTAATG
AATTTCTATTCATGCAAAAATGACTGCCTGTGAATGCTTCCCGCCTTTAT
CGCCAACAACGAAAGAACTAATATAGATGCCGAG back to topCoding sequence (CDS) from alignment at ch1:3228821..3231554- >KJC3_001256-T2 ID=KJC3_001256-T2|Name=KJC3_001256-T2|organism=Aspergillus niger KJC3|type=CDS|length=3708bp|location=Sequence derived from alignment at ch1:3228821..3231554- (Aspergillus niger KJC3)
AAACGCCGAAGGAGGCGTGGCCATGATCTGCGCTTGTCTGCCCACGGTCA
ACATCCTCATCAACAAACTCCGCAAGAAGGAGTACAGCTCTCAACGCTAT
TACGAACCGGAGTCCTCTGTCAACCTTAGCAAACTCAAAGGAAGCAACAA
GCGATTCTCCCTCGGTAATTCCCGTCGCGCCGATGGCACCGAGTCCGCCT
CCGACCAGTCACATCTGATTACATTTGCAGGGACGGTCGATATGGCAGGT
GGTAATGACGCTGGAGGCATTCACAAGACGGTGGACGTGTCACAGACGAT
AGAGATGGTGGCCGATGGTGATAGTCATGAAAGCCACCATCATGGCAGTT
TTCACTAATTCTGTTATATCGCCACCGTTCTTTACTGCCCCATGGCACTC
TTCGTCAAGATCGCACTCCTTTCTATCCTCATCCGCATCTTCAATCCTTA
CCGTTCCAAAATTTACTTCATCTACGGCCTTCTTGGCTGTCTCTGCATAT
ACTACATTGTCGCCGAGATCGTCAAGATTCGCATGTGCGACCCGGTTCCG
GCATACTGGACGCAGGATCCAAAGGCACGTTGTCTCAATCAACGGGCCGC
CCTGATCGCCGACTCTGTCATCAGTGTGGTGACCGACTTTATCATCTTGA
TTTTACCTCTTCCCCTCACCTGGTCGCTGCAGATGTCCCGGAATAAGAAG
TTGCGGGTCATCGGCATGTTGTCGGCGGGTGGTCTGGCCACGGCCTTCAG
TTTGTACCGGTTGGTTCTGGTCTTGCGTGACGGTAGTTCCAGGGACCAGA
CTATTGTCTTTATGATCGTGATTCTGTCAGGTGGGTCACTATGGCGGGGG
TTACCACATCGATGATGTCTCTGAAGCACACCAGGTTCTCTTTCGCAAGA
TGGGATACTGTGGCATTGCTATTGCCGAAACGCCGAAGGAGGCGTGGCCA
TGATCTGCGCTTGTCTGCCCACGGTCAACATCCTCATCAACAAACTCCGC
AAGAAGGAGTACAGCTCTCAACGCTATTACGAACCGGAGTCCTCTGTCAA
CCTTAGCAAACTCAAAGGAAGCAACAAGCGATTCTCCCTCGGTAATTCCC
GTCGCGCCGATGGCACCGAGTCCGCCTCCGACCAGTCACATCTGATTACA
TTTGCAGGGACGGTCGATATGGCAGGTGGTAATGACGCTGGAGGCATTCA
CAAGACGGTGGACGTGTCACAGACGATAGAGATGGTGGCCGATGGTGATA
GTCATGAAAGCCACCATCATGGCAGTTTTCACTAATTCTGTTATATCGCC
ACCGTTCTTTACTGCCCCATGGCACTCTTCGTCAAGATCGCACTCCTTTC
TATCCTCATCCGCATCTTCAATCCTTACCGTTCCAAAATTTACTTCATCT
ACGGCCTTCTTGGCTGTCTCTGCATATACTACATTGTCGCCGAGATCGTC
AAGATTCGCATGTGCGACCCGGTTCCGGCATACTGGACGCAGGATCCAAA
GGCACGTTGTCTCAATCAACGGGCCGCCCTGATCGCCGACTCTGTCATCA
GTGTGGTGACCGACTTTATCATCTTGATTTTACCTCTTCCCCTCACCTGG
TCGCTGCAGATGTCCCGGAATAAGAAGTTGCGGGTCATCGGCATGTTGTC
GGCGGGTGGTCTGGCCACGGCCTTCAGTTTGTACCGGTTGGTTCTGGTCT
TGCGTGACGGTAGTTCCAGGGACCAGACTATTGTCTTTATGATCGTGATT
CTGTCAGGTGGGTCACTATGGCGGGGGTTACCACATCGATGATGTCTCTG
AAGCACACCAGGTTCTCTTTCGCAAGATGGGATACTGTGGCATTGCTATT
GCCGAAACGCCGAAGGAGGCGTGGCCATGATCTGCGCTTGTCTGCCCACG
GTCAACATCCTCATCAACAAACTCCGCAAGAAGGAGTACAGCTCTCAACG
CTATTACGAACCGGAGTCCTCTGTCAACCTTAGCAAACTCAAAGGAAGCA
ACAAGCGATTCTCCCTCGGTAATTCCCGTCGCGCCGATGGCACCGAGTCC
GCCTCCGACCAGTCACATCTGATTACATTTGCAGGGACGGTCGATATGGC
AGGTGGTAATGACGCTGGAGGCATTCACAAGACGGTGGACGTGTCACAGA
CGATAGAGATGGTGGCCGATGGTGATAGTCATGAAAGCCACCATCATGGC
AGTTTTCACTAATTCTGTTATATCGCCACCGTTCTTTACTGCCCCATGGC
ACTCTTCGTCAAGATCGCACTCCTTTCTATCCTCATCCGCATCTTCAATC
CTTACCGTTCCAAAATTTACTTCATCTACGGCCTTCTTGGCTGTCTCTGC
ATATACTACATTGTCGCCGAGATCGTCAAGATTCGCATGTGCGACCCGGT
TCCGGCATACTGGACGCAGGATCCAAAGGCACGTTGTCTCAATCAACGGG
CCGCCCTGATCGCCGACTCTGTCATCAGTGTGGTGACCGACTTTATCATC
TTGATTTTACCTCTTCCCCTCACCTGGTCGCTGCAGATGTCCCGGAATAA
GAAGTTGCGGGTCATCGGCATGTTGTCGGCGGGTGGTCTGGCCACGGCCT
TCAGTTTGTACCGGTTGGTTCTGGTCTTGCGTGACGGTAGTTCCAGGGAC
CAGACTATTGTCTTTATGATCGTGATTCTGTCAGGTGGGTCACTATGGCG
GGGGTTACCACATCGATGATGTCTCTGAAGCACACCAGGTTCTCTTTCGC
AAGATGGGATACTGTGGCATTGCTATTGCCGAAACGCCGAAGGAGGCGTG
GCCATGATCTGCGCTTGTCTGCCCACGGTCAACATCCTCATCAACAAACT
CCGCAAGAAGGAGTACAGCTCTCAACGCTATTACGAACCGGAGTCCTCTG
TCAACCTTAGCAAACTCAAAGGAAGCAACAAGCGATTCTCCCTCGGTAAT
TCCCGTCGCGCCGATGGCACCGAGTCCGCCTCCGACCAGTCACATCTGAT
TACATTTGCAGGGACGGTCGATATGGCAGGTGGTAATGACGCTGGAGGCA
TTCACAAGACGGTGGACGTGTCACAGACGATAGAGATGGTGGCCGATGGT
GATAGTCATGAAAGCCACCATCATGGCAGTTTTCACTAATTCTGTTATAT
CGCCACCGTTCTTTACTGCCCCATGGCACTCTTCGTCAAGATCGCACTCC
TTTCTATCCTCATCCGCATCTTCAATCCTTACCGTTCCAAAATTTACTTC
ATCTACGGCCTTCTTGGCTGTCTCTGCATATACTACATTGTCGCCGAGAT
CGTCAAGATTCGCATGTGCGACCCGGTTCCGGCATACTGGACGCAGGATC
CAAAGGCACGTTGTCTCAATCAACGGGCCGCCCTGATCGCCGACTCTGTC
ATCAGTGTGGTGACCGACTTTATCATCTTGATTTTACCTCTTCCCCTCAC
CTGGTCGCTGCAGATGTCCCGGAATAAGAAGTTGCGGGTCATCGGCATGT
TGTCGGCGGGTGGTCTGGCCACGGCCTTCAGTTTGTACCGGTTGGTTCTG
GTCTTGCGTGACGGTAGTTCCAGGGACCAGACTATTGTCTTTATGATCGT
GATTCTGTCAGGTGGGTCACTATGGCGGGGGTTACCACATCGATGATGTC
TCTGAAGCACACCAGGTTCTCTTTCGCAAGATGGGATACTGTGGCATTGC
TATTGCCG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_001256-T2.utr3p1 | KJC3_001256-T2.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
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| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch1 | supercontig | ch1:3228821..3231554 - |
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