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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch1:3237000..3239207+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_001260-T1 ID=KJC3_001260-T1|Name=KJC3_001260-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2208bp|location=Sequence derived from alignment at ch1:3237000..3239207+ (Aspergillus niger KJC3)
TATACAATGAGGAACCCAAGGTCATTGCGCAGTTGTATTGAAATAGGGAC
GGCAAAAAAAAACGATAAAAGGAACCTTGGGCACTTTATAGCCCTACATG
GCTAAAGAGATGCTTCAAGAGACATATTTTACCATCATCACCGTATTCGA
AATGATTGATCTTGCCCCCTAGGCTCTTTCACCCCATTTTCATTCTTGCA
GTTACTAGTAACACATCCTCGCGGTCGCCCGGACCTAGCTGACCCTTACA
GTGACAGCAAAACAGAAAATTTCTCTGATCACCATAGAAATTACAATCCT
AAAACTTATTTTCTGGTACTTTCCCATCAAGGGCTTCGGTTAGATCAAAA
TGGATCGTGATTGTCAGGGGTCTTCACCACAAATGTTGACCTGGAAGAAC
CAATCCCGAAATTCCCGGGCTCGCCGCGGAGTCCGCGGAGAGCACGGCGG
GCGCGGGCTTCACGGAAGCGAAGGAGGTATACAACATGAACAGCATTGGA
GGACTGATAAAAATCCGCGATCGCCCGATCAATGAAGAACTCACAAGCTC
CATCCAAGGAGAATAATGTCTGCTATGAGCACAGCTACAAGGTAGGACAG
ATATCTATCGAGACAAGCCATGCACTGAATACTAAAACAACTAGCCACCA
ATCCAGCATGAAGCAATCCAAGGATCGCAGCCCAGAGGGGACATCCAACG
CCCACGAGGATGAGAAACCGACATTCGAGTTTGGAGGCGCCCCTGGGGTT
ACCATGCTGATGCTTGGGTTTCCCCTTCTCATGTACTACATGTTCATAGG
CGCGACCCTGTACGACGGCCACCTCCCGTTACCCGATGAGAACCAGTCTA
TCACCGACTTCCTCTCCCACCTCGTTGACCTCGCCCACACGCATGCCTAC
CCGAACCGCAAGGCATGGATAATATACTGGACCTTCCTTGTCCTCGAAGG
ACTCGGGTACTTGTACCTCCCGGGCGTATACGGAAAGGGAAAATGCCTTC
CTCATCTGAATGGGAAGCAGCTGGATTATTACTGCTCCGCGGCGTCGTCG
TGGTATGTTACCATCGCTGCTGCGTTGGTCCTCCACTTCTCTGGTATTTT
CCGTCTGAGTACGCTCGTTGAAGAATTCGGTCCGTTGATGTCCGTGGCTA
TTTGCTCCGGCTTTCTGGTCTCAATTATTGCGTACGTGTCTGCCTTGCTA
AGAGGTGCTCAGCATCGGATGACGGGGTCCCATGTTTATGATTTCTTTAT
GGGTGCGGAGCTCAACCCTCGTTTGTTTCAGTGGCTTGATATGAAGATGT
TCTTCGAGGTTCGCATACCCTGGTATATTCTGTTTTTGTTGACGCTCGGA
ACTGCGTTGAAGCAGTGGGAAGACTATGGGTTCGTCTCTGGGGAAGTGTC
CTTTCTGCTTTTGGCACACTTCTTGTATGCGAATGCCTGCGCTAAGGGGG
AAGAACTGATCATCACTAGCTGGTATGTTCCTATATGCGGCGGACGAATC
GACAGTACTGATATTGCCACAGGGATATGTACTATGAGAAATGGGGATTC
ATGCTCATTTTCTGGAATCTTGCTGGTGTTCCCATGAGCTACTGCCATTG
CACCCTGTACCTGGCGAGCCACGATCCGTCAACTTATAAGTGGAACCCTA
TAGCACTGGGCGTGCTATTTGTGATGTATATTTTCGCATACTGGGTGTGG
GATACGTGCAACAGTCAAAAGAACCTCTTCCGAGCTCAGGAGAGAGGAAA
GCCTGTGAACCGCAAGACATTCCCTCAGCTACCGTGGAAATCAGTTAAGA
ACCCTGTCTGCATCAAGACAAAAACAGGAGATTCCATCCTGTGCAGTGGG
TGGTGTAGGTTTTACTCTTTCCTGTATTGCGAATCAGGGCTGATGAAGTA
TAGATGGAATGGCACGTAAGGTCCATTACAGCTGTGACTGGTTCTTCGCT
TTCTCCTGGGGCCTTATTACTGGCTTTAACTCGCCATTTCCCTGGTTCTA
CTCGTGCTTCTTCACTGTCATGATAATCCATCGTGCCCTGCGGGACATTG
AACGTTGTCGCGAAAGATATGGAGAAGCTTGGCGCGAGTATGAGCGGAGG
GTCCCGTACTTGTTCATTCCGGTAAGTCGCCTCGAGTTGGTGTTGTGATT
CAGCTAACATCAGAAAAGTATGTCTTCTAAGTCATTGGAATAAGGGTTTG
GGTCTTTC back to topCoding sequence (CDS) from alignment at ch1:3237000..3239207+ >KJC3_001260-T1 ID=KJC3_001260-T1|Name=KJC3_001260-T1|organism=Aspergillus niger KJC3|type=CDS|length=7080bp|location=Sequence derived from alignment at ch1:3237000..3239207+ (Aspergillus niger KJC3)
ATGTCTGCTATGAGCACAGCTACAAGCCACCAATCCAGCATGAAGCAATC
CAAGGATCGCAGCCCAGAGGGGACATCCAACGCCCACGAGGATGAGAAAC
CGACATTCGAGTTTGGAGGCGCCCCTGGGGTTACCATGCTGATGCTTGGG
TTTCCCCTTCTCATGTACTACATGTTCATAGGCGCGACCCTGTACGACGG
CCACCTCCCGTTACCCGATGAGAACCAGTCTATCACCGACTTCCTCTCCC
ACCTCGTTGACCTCGCCCACACGCATGCCTACCCGAACCGCAAGGCATGG
ATAATATACTGGACCTTCCTTGTCCTCGAAGGACTCGGGTACTTGTACCT
CCCGGGCGTATACGGAAAGGGAAAATGCCTTCCTCATCTGAATGGGAAGC
AGCTGGATTATTACTGCTCCGCGGCGTCGTCGTGGTATGTTACCATCGCT
GCTGCGTTGGTCCTCCACTTCTCTGGTATTTTCCGTCTGAGTACGCTCGT
TGAAGAATTCGGTCCGTTGATGTCCGTGGCTATTTGCTCCGGCTTTCTGG
TCTCAATTATTGCGTACGTGTCTGCCTTGCTAAGAGGTGCTCAGCATCGG
ATGACGGGGTCCCATGTTTATGATTTCTTTATGGGTGCGGAGCTCAACCC
TCGTTTGTTTCAGTGGCTTGATATGAAGATGTTCTTCGAGGTTCGCATAC
CCTGGTATATTCTGTTTTTGTTGACGCTCGGAACTGCGTTGAAGCAGTGG
GAAGACTATGGGTTCGTCTCTGGGGAAGTGTCCTTTCTGCTTTTGGCACA
CTTCTTGTATGCGAATGCCTGCGCTAAGGGGGAAGAACTGATCATCACTA
GCTGGGATATGTACTATGAGAAATGGGGATTCATGCTCATTTTCTGGAAT
CTTGCTGGTGTTCCCATGAGCTACTGCCATTGCACCCTGTACCTGGCGAG
CCACGATCCGTCAACTTATAAGTGGAACCCTATAGCACTGGGCGTGCTAT
TTGTGATGTATATTTTCGCATACTGGGTGTGGGATACGTGCAACAGTCAA
AAGAACCTCTTCCGAGCTCAGGAGAGAGGAAAGCCTGTGAACCGCAAGAC
ATTCCCTCAGCTACCGTGGAAATCAGTTAAGAACCCTGTCTGCATCAAGA
CAAAAACAGGAGATTCCATCCTGTGCAGTGGGTGGTATGGAATGGCACGT
AAGGTCCATTACAGCTGTGACTGGTTCTTCGCTTTCTCCTGGGGCCTTAT
TACTGGCTTTAACTCGCCATTTCCCTGGTTCTACTCGTGCTTCTTCACTG
TCATGATAATCCATCGTGCCCTGCGGGACATTGAACGTTGTCGCGAAAGA
TATGGAGAAGCTTGGCGCGAGTATGAGCGGAGGGTCCCGTACTTGTTCAT
TCCGTATGTCTTCTAAATGTCTGCTATGAGCACAGCTACAAGCCACCAAT
CCAGCATGAAGCAATCCAAGGATCGCAGCCCAGAGGGGACATCCAACGCC
CACGAGGATGAGAAACCGACATTCGAGTTTGGAGGCGCCCCTGGGGTTAC
CATGCTGATGCTTGGGTTTCCCCTTCTCATGTACTACATGTTCATAGGCG
CGACCCTGTACGACGGCCACCTCCCGTTACCCGATGAGAACCAGTCTATC
ACCGACTTCCTCTCCCACCTCGTTGACCTCGCCCACACGCATGCCTACCC
GAACCGCAAGGCATGGATAATATACTGGACCTTCCTTGTCCTCGAAGGAC
TCGGGTACTTGTACCTCCCGGGCGTATACGGAAAGGGAAAATGCCTTCCT
CATCTGAATGGGAAGCAGCTGGATTATTACTGCTCCGCGGCGTCGTCGTG
GTATGTTACCATCGCTGCTGCGTTGGTCCTCCACTTCTCTGGTATTTTCC
GTCTGAGTACGCTCGTTGAAGAATTCGGTCCGTTGATGTCCGTGGCTATT
TGCTCCGGCTTTCTGGTCTCAATTATTGCGTACGTGTCTGCCTTGCTAAG
AGGTGCTCAGCATCGGATGACGGGGTCCCATGTTTATGATTTCTTTATGG
GTGCGGAGCTCAACCCTCGTTTGTTTCAGTGGCTTGATATGAAGATGTTC
TTCGAGGTTCGCATACCCTGGTATATTCTGTTTTTGTTGACGCTCGGAAC
TGCGTTGAAGCAGTGGGAAGACTATGGGTTCGTCTCTGGGGAAGTGTCCT
TTCTGCTTTTGGCACACTTCTTGTATGCGAATGCCTGCGCTAAGGGGGAA
GAACTGATCATCACTAGCTGGGATATGTACTATGAGAAATGGGGATTCAT
GCTCATTTTCTGGAATCTTGCTGGTGTTCCCATGAGCTACTGCCATTGCA
CCCTGTACCTGGCGAGCCACGATCCGTCAACTTATAAGTGGAACCCTATA
GCACTGGGCGTGCTATTTGTGATGTATATTTTCGCATACTGGGTGTGGGA
TACGTGCAACAGTCAAAAGAACCTCTTCCGAGCTCAGGAGAGAGGAAAGC
CTGTGAACCGCAAGACATTCCCTCAGCTACCGTGGAAATCAGTTAAGAAC
CCTGTCTGCATCAAGACAAAAACAGGAGATTCCATCCTGTGCAGTGGGTG
GTATGGAATGGCACGTAAGGTCCATTACAGCTGTGACTGGTTCTTCGCTT
TCTCCTGGGGCCTTATTACTGGCTTTAACTCGCCATTTCCCTGGTTCTAC
TCGTGCTTCTTCACTGTCATGATAATCCATCGTGCCCTGCGGGACATTGA
ACGTTGTCGCGAAAGATATGGAGAAGCTTGGCGCGAGTATGAGCGGAGGG
TCCCGTACTTGTTCATTCCGTATGTCTTCTAAATGTCTGCTATGAGCACA
GCTACAAGCCACCAATCCAGCATGAAGCAATCCAAGGATCGCAGCCCAGA
GGGGACATCCAACGCCCACGAGGATGAGAAACCGACATTCGAGTTTGGAG
GCGCCCCTGGGGTTACCATGCTGATGCTTGGGTTTCCCCTTCTCATGTAC
TACATGTTCATAGGCGCGACCCTGTACGACGGCCACCTCCCGTTACCCGA
TGAGAACCAGTCTATCACCGACTTCCTCTCCCACCTCGTTGACCTCGCCC
ACACGCATGCCTACCCGAACCGCAAGGCATGGATAATATACTGGACCTTC
CTTGTCCTCGAAGGACTCGGGTACTTGTACCTCCCGGGCGTATACGGAAA
GGGAAAATGCCTTCCTCATCTGAATGGGAAGCAGCTGGATTATTACTGCT
CCGCGGCGTCGTCGTGGTATGTTACCATCGCTGCTGCGTTGGTCCTCCAC
TTCTCTGGTATTTTCCGTCTGAGTACGCTCGTTGAAGAATTCGGTCCGTT
GATGTCCGTGGCTATTTGCTCCGGCTTTCTGGTCTCAATTATTGCGTACG
TGTCTGCCTTGCTAAGAGGTGCTCAGCATCGGATGACGGGGTCCCATGTT
TATGATTTCTTTATGGGTGCGGAGCTCAACCCTCGTTTGTTTCAGTGGCT
TGATATGAAGATGTTCTTCGAGGTTCGCATACCCTGGTATATTCTGTTTT
TGTTGACGCTCGGAACTGCGTTGAAGCAGTGGGAAGACTATGGGTTCGTC
TCTGGGGAAGTGTCCTTTCTGCTTTTGGCACACTTCTTGTATGCGAATGC
CTGCGCTAAGGGGGAAGAACTGATCATCACTAGCTGGGATATGTACTATG
AGAAATGGGGATTCATGCTCATTTTCTGGAATCTTGCTGGTGTTCCCATG
AGCTACTGCCATTGCACCCTGTACCTGGCGAGCCACGATCCGTCAACTTA
TAAGTGGAACCCTATAGCACTGGGCGTGCTATTTGTGATGTATATTTTCG
CATACTGGGTGTGGGATACGTGCAACAGTCAAAAGAACCTCTTCCGAGCT
CAGGAGAGAGGAAAGCCTGTGAACCGCAAGACATTCCCTCAGCTACCGTG
GAAATCAGTTAAGAACCCTGTCTGCATCAAGACAAAAACAGGAGATTCCA
TCCTGTGCAGTGGGTGGTATGGAATGGCACGTAAGGTCCATTACAGCTGT
GACTGGTTCTTCGCTTTCTCCTGGGGCCTTATTACTGGCTTTAACTCGCC
ATTTCCCTGGTTCTACTCGTGCTTCTTCACTGTCATGATAATCCATCGTG
CCCTGCGGGACATTGAACGTTGTCGCGAAAGATATGGAGAAGCTTGGCGC
GAGTATGAGCGGAGGGTCCCGTACTTGTTCATTCCGTATGTCTTCTAAAT
GTCTGCTATGAGCACAGCTACAAGCCACCAATCCAGCATGAAGCAATCCA
AGGATCGCAGCCCAGAGGGGACATCCAACGCCCACGAGGATGAGAAACCG
ACATTCGAGTTTGGAGGCGCCCCTGGGGTTACCATGCTGATGCTTGGGTT
TCCCCTTCTCATGTACTACATGTTCATAGGCGCGACCCTGTACGACGGCC
ACCTCCCGTTACCCGATGAGAACCAGTCTATCACCGACTTCCTCTCCCAC
CTCGTTGACCTCGCCCACACGCATGCCTACCCGAACCGCAAGGCATGGAT
AATATACTGGACCTTCCTTGTCCTCGAAGGACTCGGGTACTTGTACCTCC
CGGGCGTATACGGAAAGGGAAAATGCCTTCCTCATCTGAATGGGAAGCAG
CTGGATTATTACTGCTCCGCGGCGTCGTCGTGGTATGTTACCATCGCTGC
TGCGTTGGTCCTCCACTTCTCTGGTATTTTCCGTCTGAGTACGCTCGTTG
AAGAATTCGGTCCGTTGATGTCCGTGGCTATTTGCTCCGGCTTTCTGGTC
TCAATTATTGCGTACGTGTCTGCCTTGCTAAGAGGTGCTCAGCATCGGAT
GACGGGGTCCCATGTTTATGATTTCTTTATGGGTGCGGAGCTCAACCCTC
GTTTGTTTCAGTGGCTTGATATGAAGATGTTCTTCGAGGTTCGCATACCC
TGGTATATTCTGTTTTTGTTGACGCTCGGAACTGCGTTGAAGCAGTGGGA
AGACTATGGGTTCGTCTCTGGGGAAGTGTCCTTTCTGCTTTTGGCACACT
TCTTGTATGCGAATGCCTGCGCTAAGGGGGAAGAACTGATCATCACTAGC
TGGGATATGTACTATGAGAAATGGGGATTCATGCTCATTTTCTGGAATCT
TGCTGGTGTTCCCATGAGCTACTGCCATTGCACCCTGTACCTGGCGAGCC
ACGATCCGTCAACTTATAAGTGGAACCCTATAGCACTGGGCGTGCTATTT
GTGATGTATATTTTCGCATACTGGGTGTGGGATACGTGCAACAGTCAAAA
GAACCTCTTCCGAGCTCAGGAGAGAGGAAAGCCTGTGAACCGCAAGACAT
TCCCTCAGCTACCGTGGAAATCAGTTAAGAACCCTGTCTGCATCAAGACA
AAAACAGGAGATTCCATCCTGTGCAGTGGGTGGTATGGAATGGCACGTAA
GGTCCATTACAGCTGTGACTGGTTCTTCGCTTTCTCCTGGGGCCTTATTA
CTGGCTTTAACTCGCCATTTCCCTGGTTCTACTCGTGCTTCTTCACTGTC
ATGATAATCCATCGTGCCCTGCGGGACATTGAACGTTGTCGCGAAAGATA
TGGAGAAGCTTGGCGCGAGTATGAGCGGAGGGTCCCGTACTTGTTCATTC
CGTATGTCTTCTAAATGTCTGCTATGAGCACAGCTACAAGCCACCAATCC
AGCATGAAGCAATCCAAGGATCGCAGCCCAGAGGGGACATCCAACGCCCA
CGAGGATGAGAAACCGACATTCGAGTTTGGAGGCGCCCCTGGGGTTACCA
TGCTGATGCTTGGGTTTCCCCTTCTCATGTACTACATGTTCATAGGCGCG
ACCCTGTACGACGGCCACCTCCCGTTACCCGATGAGAACCAGTCTATCAC
CGACTTCCTCTCCCACCTCGTTGACCTCGCCCACACGCATGCCTACCCGA
ACCGCAAGGCATGGATAATATACTGGACCTTCCTTGTCCTCGAAGGACTC
GGGTACTTGTACCTCCCGGGCGTATACGGAAAGGGAAAATGCCTTCCTCA
TCTGAATGGGAAGCAGCTGGATTATTACTGCTCCGCGGCGTCGTCGTGGT
ATGTTACCATCGCTGCTGCGTTGGTCCTCCACTTCTCTGGTATTTTCCGT
CTGAGTACGCTCGTTGAAGAATTCGGTCCGTTGATGTCCGTGGCTATTTG
CTCCGGCTTTCTGGTCTCAATTATTGCGTACGTGTCTGCCTTGCTAAGAG
GTGCTCAGCATCGGATGACGGGGTCCCATGTTTATGATTTCTTTATGGGT
GCGGAGCTCAACCCTCGTTTGTTTCAGTGGCTTGATATGAAGATGTTCTT
CGAGGTTCGCATACCCTGGTATATTCTGTTTTTGTTGACGCTCGGAACTG
CGTTGAAGCAGTGGGAAGACTATGGGTTCGTCTCTGGGGAAGTGTCCTTT
CTGCTTTTGGCACACTTCTTGTATGCGAATGCCTGCGCTAAGGGGGAAGA
ACTGATCATCACTAGCTGGGATATGTACTATGAGAAATGGGGATTCATGC
TCATTTTCTGGAATCTTGCTGGTGTTCCCATGAGCTACTGCCATTGCACC
CTGTACCTGGCGAGCCACGATCCGTCAACTTATAAGTGGAACCCTATAGC
ACTGGGCGTGCTATTTGTGATGTATATTTTCGCATACTGGGTGTGGGATA
CGTGCAACAGTCAAAAGAACCTCTTCCGAGCTCAGGAGAGAGGAAAGCCT
GTGAACCGCAAGACATTCCCTCAGCTACCGTGGAAATCAGTTAAGAACCC
TGTCTGCATCAAGACAAAAACAGGAGATTCCATCCTGTGCAGTGGGTGGT
ATGGAATGGCACGTAAGGTCCATTACAGCTGTGACTGGTTCTTCGCTTTC
TCCTGGGGCCTTATTACTGGCTTTAACTCGCCATTTCCCTGGTTCTACTC
GTGCTTCTTCACTGTCATGATAATCCATCGTGCCCTGCGGGACATTGAAC
GTTGTCGCGAAAGATATGGAGAAGCTTGGCGCGAGTATGAGCGGAGGGTC
CCGTACTTGTTCATTCCGTATGTCTTCTAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0016020 | membrane |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0055114 | oxidation-reduction process |
| GO:0016126 | sterol biosynthetic process |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0016628 | oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_001260-T1.utr5p1 | KJC3_001260-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_001260-T1.utr3p1 | KJC3_001260-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR018083 |
| DBxref | InterPro:IPR001171 |
| DBxref | PFAM:PF01222 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch1 | supercontig | ch1:3237000..3239207 + |
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