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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch1:3239209..3241922- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_001261-T2 ID=KJC3_001261-T2|Name=KJC3_001261-T2|organism=Aspergillus niger KJC3|type=mRNA|length=2714bp|location=Sequence derived from alignment at ch1:3239209..3241922- (Aspergillus niger KJC3)
CTTTTGCCGGGGTACAGCCACTGTTGTCACGTTCCAGGCAAGAAGTATCG
ATATATTATGCGAATTATCGGTCATAACTAGCGGCTTCACCTACAATGGC
TGCCCGAACTCCTTCCATCGCCCGCAACTCGTTCCGGGCCCGCGCGGTAC
GGCTTCTTCGTCCGCCACCATTTGATCTATAACAAGTACTAAATCCCACC
AGTGCGACAATTGTCGGCTTCGGAAGGTATCATACCCTGAGGGCCAATTT
TGTATTATATTGATGCTCATGGAAATTTCTTTAGATTAAGTGTGATAAAG
TAGTCCCTTGCTCCAGCTGCAGCGCTCTTGGAATCGCCTGTGGTCCGACA
GGTACGCCTGTCAGGTCTTCGGAAACACGCAGAGCCGATTCCGACGATTA
GTGGGTTTATTTAAATCATCACTGCTTACAGGGCTGACAGAAGTTAGTGA
GCAAAGGTTCTCGGCAATCCAAGAACAATTAGCAACCATTCAGCAAGCAC
TCCATCAGATAACGAAGCCATCAACTTCAGTACAGCCAGATTCTCACCCC
ATAGCCACCGGCCCAACAGCTCCTCCGTTTGAGGGACAGTCATCTTTCCA
TCATGAGACCCTTGTAGCCAGGGACGCAGCATATTCTGCTGCTAATACTG
CCCGAGATGGACAGGTTGGGGATTATGTCTCTGCTGCGCTCTCCTCTCTA
AAAAGTAGCCTCGATAGGCACAATCACGCCATGAATCGGAGTGGAGCACA
ATCACCTGCACAACTAAATCAGACATTGCTTCCTGTAGATCTGGTCGTAG
CAGTGGTGAAGAAGGTTAAATGTATACATCTCCATTCCCCTTCGTTGCTA
TCACTGACGCAATATAGCTCAACCTCCTTTCTTCCTGGTCAGTCAATCTT
GGTTAGACTCCACCCGCGTGGAACATCTATGCCAGTCGATATATTTCCCG
CTAGATCCTGTGCCACCTGGCTCGCTCACACTCTTCTATGGTATACTTTT
TTATGTGATCCGCGATTATCTTCATGCAGGAGATCCCGACCTGGCACACT
TTGACCTTCAATTAAGCCTTGAGCTCTGTGAGCGACACTTTGTCGCTGGC
TTGAGTAAACCTGAGATCATGTTCGAGCCAACTTTGGAGAAGATACAGGC
ACTGTTGCTTGGGGTATGTTTGAGCTTTCCAGGTGATACACATTCTGACA
GATTCAGGTTCTGAAAGCACAAGAGGAAACCGACGTCCAGAGGTGCTGGA
CTTTCCTTTCTCTGGCATTCAATATGTGCCAGAGCATCGGCTTACACCGA
CGTTCCACTTTAGAGAAGGATGAGTTTGCTATTGCTGAGGCAAAACGCCA
TGCGTTCTGGGCACTTTACACCATTGACAAGAATATCTCTCTCAATATTG
GCGTGACATCCCACTTTCAGGACCACGACATCGATGCAGACCTTTATGCT
CCTTCAAATGATCCCAAGTATCGCCCGTGGGACTTAATGGGGCTTGTGAT
CGTCGAATTCGCGAATGTTCAGGGTAGAGTCTATGACCAGCTGTACTCTA
CCTCTGCTTGTCGAGCAGATGACGAGCAACGATCAGCATCAATTGAGCGG
CTGTCCTCCGACCTAATGACAGTGCGGGACAAGCTTCTTGCGGTACGCAT
TCCTTCTGATGAGGCAGTCAAGTCAGCTAATGCTTTTACAAGATTGATGT
TAGTCGGGGTCTCTATGCCGACTCACTACATGGGATGGCAGCCTGTGCAG
ATTTTATAGCATACTCAGTATTGACCGTCATCTACCGCGCGCAGACCCAT
CCACGCGACGTAATGGCGGTTTCTTCCCAGTGCTATGCATCTGCGACTGC
TGCTTTACAGAGTCATCTCAAGTGCTTCACCTACTTCCGCGGTCGCCAGA
CACATAAGCAAACAGAATACGTAAATTGGTAAGACAAACTGATAATCTGC
ATTGGTATAGTACACTAAAGGGACAGGATACTTCTTTATCCTTCATTTAC
ACCCTTCGTCATCGTCTTTACTCACGCCATCACGACCGCCAGTACAGCAG
ATCTCGCTCTGCTACAGGATACCGCCAGCTCCCTAGAACTAATTAAAGGC
CTTTCACGAGGGTCAATGCACTTATACACTATCTGTGACGCTTTTGTCCG
GGCTGCCCAGATCCTCGTGAACTCACAACAGACACTAACTGGGTTGGAAC
AACATCAAGATGGATCCCTTGTTATTCCCACAACTGATGGGCCCGGAAAT
ATTGCCCTACCAGATGTTCCATGGCCTGAAGATACATTTGATTCCACCAT
GAACCAGGCAGACATATCCATGTTCCTAAATGGCTTTATTGGCACAAGTC
GATCGGTCATGGATATTCTAAGCTTCGATCCCAATAGCGATTCGATTTAA
TGAATACACCATATCTTCATTTCATTGCTAATTGTTGGCTGTGGCTTCTA
AATTCCATACCTTTCATTCTTTGAAGTGCTCATAAAGAATGGAAGACCGG
TCTGGACAACTTTCCCACTGTCTGCGATATGCTAATTCTGTCTATCGTCG
ACAAAGAAGGCAGGTACACTGGGACATGTGACTGGTTATATTTATCCAAG
ATTATAATCCTATATACAGTCTGGTAAAGCATAGCAAACGCAGGTCAACA
GGATAATAAGCTAATAAAAGTGAGTCTTGGTTTGGCCAATGCAAACTAAA
TTAGGACGCCCAAC back to topCoding sequence (CDS) from alignment at ch1:3239209..3241922- >KJC3_001261-T2 ID=KJC3_001261-T2|Name=KJC3_001261-T2|organism=Aspergillus niger KJC3|type=CDS|length=7410bp|location=Sequence derived from alignment at ch1:3239209..3241922- (Aspergillus niger KJC3)
GATACTTCTTTATCCTTCATTTACACCCTTCGTCATCGTCTTTACTCACG
CCATCACGACCGCCAGTACAGCAGATCTCGCTCTGCTACAGGATACCGCC
AGCTCCCTAGAACTAATTAAAGGCCTTTCACGAGGGTCAATGCACTTATA
CACTATCTGTGACGCTTTTGTCCGGGCTGCCCAGATCCTCGTGAACTCAC
AACAGACACTAACTGGGTTGGAACAACATCAAGATGGATCCCTTGTTATT
CCCACAACTGATGGGCCCGGAAATATTGCCCTACCAGATGTTCCATGGCC
TGAAGATACATTTGATTCCACCATGAACCAGGCAGACATATCCATGTTCC
TAAATGGCTTTATTGGCACAAGTCGATCGGTCATGGATATTCTAAGCTTC
GATCCCAATAGCGATTCGATTTAAATTGATGTTAGTCGGGGTCTCTATGC
CGACTCACTACATGGGATGGCAGCCTGTGCAGATTTTATAGCATACTCAG
TATTGACCGTCATCTACCGCGCGCAGACCCATCCACGCGACGTAATGGCG
GTTTCTTCCCAGTGCTATGCATCTGCGACTGCTGCTTTACAGAGTCATCT
CAAGTGCTTCACCTACTTCCGCGGTCGCCAGACACATAAGCAAACAGAAT
ACGTAAATTGGTTCTGAAAGCACAAGAGGAAACCGACGTCCAGAGGTGCT
GGACTTTCCTTTCTCTGGCATTCAATATGTGCCAGAGCATCGGCTTACAC
CGACGTTCCACTTTAGAGAAGGATGAGTTTGCTATTGCTGAGGCAAAACG
CCATGCGTTCTGGGCACTTTACACCATTGACAAGAATATCTCTCTCAATA
TTGGCGTGACATCCCACTTTCAGGACCACGACATCGATGCAGACCTTTAT
GCTCCTTCAAATGATCCCAAGTATCGCCCGTGGGACTTAATGGGGCTTGT
GATCGTCGAATTCGCGAATGTTCAGGGTAGAGTCTATGACCAGCTGTACT
CTACCTCTGCTTGTCGAGCAGATGACGAGCAACGATCAGCATCAATTGAG
CGGCTGTCCTCCGACCTAATGACAGTGCGGGACAAGCTTCTTGCGCTCAA
CCTCCTTTCTTCCTGGTCAGTCAATCTTGGTTAGACTCCACCCGCGTGGA
ACATCTATGCCAGTCGATATATTTCCCGCTAGATCCTGTGCCACCTGGCT
CGCTCACACTCTTCTATGGTATACTTTTTTATGTGATCCGCGATTATCTT
CATGCAGGAGATCCCGACCTGGCACACTTTGACCTTCAATTAAGCCTTGA
GCTCTGTGAGCGACACTTTGTCGCTGGCTTGAGTAAACCTGAGATCATGT
TCGAGCCAACTTTGGAGAAGATACAGGCACTGTTGCTTGGGATGAATCGG
AGTGGAGCACAATCACCTGCACAACTAAATCAGACATTGCTTCCTGTAGA
TCTGGTCGTAGCAGTGGTGAAGAAGGTTAAATGATACTTCTTTATCCTTC
ATTTACACCCTTCGTCATCGTCTTTACTCACGCCATCACGACCGCCAGTA
CAGCAGATCTCGCTCTGCTACAGGATACCGCCAGCTCCCTAGAACTAATT
AAAGGCCTTTCACGAGGGTCAATGCACTTATACACTATCTGTGACGCTTT
TGTCCGGGCTGCCCAGATCCTCGTGAACTCACAACAGACACTAACTGGGT
TGGAACAACATCAAGATGGATCCCTTGTTATTCCCACAACTGATGGGCCC
GGAAATATTGCCCTACCAGATGTTCCATGGCCTGAAGATACATTTGATTC
CACCATGAACCAGGCAGACATATCCATGTTCCTAAATGGCTTTATTGGCA
CAAGTCGATCGGTCATGGATATTCTAAGCTTCGATCCCAATAGCGATTCG
ATTTAAATTGATGTTAGTCGGGGTCTCTATGCCGACTCACTACATGGGAT
GGCAGCCTGTGCAGATTTTATAGCATACTCAGTATTGACCGTCATCTACC
GCGCGCAGACCCATCCACGCGACGTAATGGCGGTTTCTTCCCAGTGCTAT
GCATCTGCGACTGCTGCTTTACAGAGTCATCTCAAGTGCTTCACCTACTT
CCGCGGTCGCCAGACACATAAGCAAACAGAATACGTAAATTGGTTCTGAA
AGCACAAGAGGAAACCGACGTCCAGAGGTGCTGGACTTTCCTTTCTCTGG
CATTCAATATGTGCCAGAGCATCGGCTTACACCGACGTTCCACTTTAGAG
AAGGATGAGTTTGCTATTGCTGAGGCAAAACGCCATGCGTTCTGGGCACT
TTACACCATTGACAAGAATATCTCTCTCAATATTGGCGTGACATCCCACT
TTCAGGACCACGACATCGATGCAGACCTTTATGCTCCTTCAAATGATCCC
AAGTATCGCCCGTGGGACTTAATGGGGCTTGTGATCGTCGAATTCGCGAA
TGTTCAGGGTAGAGTCTATGACCAGCTGTACTCTACCTCTGCTTGTCGAG
CAGATGACGAGCAACGATCAGCATCAATTGAGCGGCTGTCCTCCGACCTA
ATGACAGTGCGGGACAAGCTTCTTGCGCTCAACCTCCTTTCTTCCTGGTC
AGTCAATCTTGGTTAGACTCCACCCGCGTGGAACATCTATGCCAGTCGAT
ATATTTCCCGCTAGATCCTGTGCCACCTGGCTCGCTCACACTCTTCTATG
GTATACTTTTTTATGTGATCCGCGATTATCTTCATGCAGGAGATCCCGAC
CTGGCACACTTTGACCTTCAATTAAGCCTTGAGCTCTGTGAGCGACACTT
TGTCGCTGGCTTGAGTAAACCTGAGATCATGTTCGAGCCAACTTTGGAGA
AGATACAGGCACTGTTGCTTGGGATGAATCGGAGTGGAGCACAATCACCT
GCACAACTAAATCAGACATTGCTTCCTGTAGATCTGGTCGTAGCAGTGGT
GAAGAAGGTTAAATGATACTTCTTTATCCTTCATTTACACCCTTCGTCAT
CGTCTTTACTCACGCCATCACGACCGCCAGTACAGCAGATCTCGCTCTGC
TACAGGATACCGCCAGCTCCCTAGAACTAATTAAAGGCCTTTCACGAGGG
TCAATGCACTTATACACTATCTGTGACGCTTTTGTCCGGGCTGCCCAGAT
CCTCGTGAACTCACAACAGACACTAACTGGGTTGGAACAACATCAAGATG
GATCCCTTGTTATTCCCACAACTGATGGGCCCGGAAATATTGCCCTACCA
GATGTTCCATGGCCTGAAGATACATTTGATTCCACCATGAACCAGGCAGA
CATATCCATGTTCCTAAATGGCTTTATTGGCACAAGTCGATCGGTCATGG
ATATTCTAAGCTTCGATCCCAATAGCGATTCGATTTAAATTGATGTTAGT
CGGGGTCTCTATGCCGACTCACTACATGGGATGGCAGCCTGTGCAGATTT
TATAGCATACTCAGTATTGACCGTCATCTACCGCGCGCAGACCCATCCAC
GCGACGTAATGGCGGTTTCTTCCCAGTGCTATGCATCTGCGACTGCTGCT
TTACAGAGTCATCTCAAGTGCTTCACCTACTTCCGCGGTCGCCAGACACA
TAAGCAAACAGAATACGTAAATTGGTTCTGAAAGCACAAGAGGAAACCGA
CGTCCAGAGGTGCTGGACTTTCCTTTCTCTGGCATTCAATATGTGCCAGA
GCATCGGCTTACACCGACGTTCCACTTTAGAGAAGGATGAGTTTGCTATT
GCTGAGGCAAAACGCCATGCGTTCTGGGCACTTTACACCATTGACAAGAA
TATCTCTCTCAATATTGGCGTGACATCCCACTTTCAGGACCACGACATCG
ATGCAGACCTTTATGCTCCTTCAAATGATCCCAAGTATCGCCCGTGGGAC
TTAATGGGGCTTGTGATCGTCGAATTCGCGAATGTTCAGGGTAGAGTCTA
TGACCAGCTGTACTCTACCTCTGCTTGTCGAGCAGATGACGAGCAACGAT
CAGCATCAATTGAGCGGCTGTCCTCCGACCTAATGACAGTGCGGGACAAG
CTTCTTGCGCTCAACCTCCTTTCTTCCTGGTCAGTCAATCTTGGTTAGAC
TCCACCCGCGTGGAACATCTATGCCAGTCGATATATTTCCCGCTAGATCC
TGTGCCACCTGGCTCGCTCACACTCTTCTATGGTATACTTTTTTATGTGA
TCCGCGATTATCTTCATGCAGGAGATCCCGACCTGGCACACTTTGACCTT
CAATTAAGCCTTGAGCTCTGTGAGCGACACTTTGTCGCTGGCTTGAGTAA
ACCTGAGATCATGTTCGAGCCAACTTTGGAGAAGATACAGGCACTGTTGC
TTGGGATGAATCGGAGTGGAGCACAATCACCTGCACAACTAAATCAGACA
TTGCTTCCTGTAGATCTGGTCGTAGCAGTGGTGAAGAAGGTTAAATGATA
CTTCTTTATCCTTCATTTACACCCTTCGTCATCGTCTTTACTCACGCCAT
CACGACCGCCAGTACAGCAGATCTCGCTCTGCTACAGGATACCGCCAGCT
CCCTAGAACTAATTAAAGGCCTTTCACGAGGGTCAATGCACTTATACACT
ATCTGTGACGCTTTTGTCCGGGCTGCCCAGATCCTCGTGAACTCACAACA
GACACTAACTGGGTTGGAACAACATCAAGATGGATCCCTTGTTATTCCCA
CAACTGATGGGCCCGGAAATATTGCCCTACCAGATGTTCCATGGCCTGAA
GATACATTTGATTCCACCATGAACCAGGCAGACATATCCATGTTCCTAAA
TGGCTTTATTGGCACAAGTCGATCGGTCATGGATATTCTAAGCTTCGATC
CCAATAGCGATTCGATTTAAATTGATGTTAGTCGGGGTCTCTATGCCGAC
TCACTACATGGGATGGCAGCCTGTGCAGATTTTATAGCATACTCAGTATT
GACCGTCATCTACCGCGCGCAGACCCATCCACGCGACGTAATGGCGGTTT
CTTCCCAGTGCTATGCATCTGCGACTGCTGCTTTACAGAGTCATCTCAAG
TGCTTCACCTACTTCCGCGGTCGCCAGACACATAAGCAAACAGAATACGT
AAATTGGTTCTGAAAGCACAAGAGGAAACCGACGTCCAGAGGTGCTGGAC
TTTCCTTTCTCTGGCATTCAATATGTGCCAGAGCATCGGCTTACACCGAC
GTTCCACTTTAGAGAAGGATGAGTTTGCTATTGCTGAGGCAAAACGCCAT
GCGTTCTGGGCACTTTACACCATTGACAAGAATATCTCTCTCAATATTGG
CGTGACATCCCACTTTCAGGACCACGACATCGATGCAGACCTTTATGCTC
CTTCAAATGATCCCAAGTATCGCCCGTGGGACTTAATGGGGCTTGTGATC
GTCGAATTCGCGAATGTTCAGGGTAGAGTCTATGACCAGCTGTACTCTAC
CTCTGCTTGTCGAGCAGATGACGAGCAACGATCAGCATCAATTGAGCGGC
TGTCCTCCGACCTAATGACAGTGCGGGACAAGCTTCTTGCGCTCAACCTC
CTTTCTTCCTGGTCAGTCAATCTTGGTTAGACTCCACCCGCGTGGAACAT
CTATGCCAGTCGATATATTTCCCGCTAGATCCTGTGCCACCTGGCTCGCT
CACACTCTTCTATGGTATACTTTTTTATGTGATCCGCGATTATCTTCATG
CAGGAGATCCCGACCTGGCACACTTTGACCTTCAATTAAGCCTTGAGCTC
TGTGAGCGACACTTTGTCGCTGGCTTGAGTAAACCTGAGATCATGTTCGA
GCCAACTTTGGAGAAGATACAGGCACTGTTGCTTGGGATGAATCGGAGTG
GAGCACAATCACCTGCACAACTAAATCAGACATTGCTTCCTGTAGATCTG
GTCGTAGCAGTGGTGAAGAAGGTTAAATGATACTTCTTTATCCTTCATTT
ACACCCTTCGTCATCGTCTTTACTCACGCCATCACGACCGCCAGTACAGC
AGATCTCGCTCTGCTACAGGATACCGCCAGCTCCCTAGAACTAATTAAAG
GCCTTTCACGAGGGTCAATGCACTTATACACTATCTGTGACGCTTTTGTC
CGGGCTGCCCAGATCCTCGTGAACTCACAACAGACACTAACTGGGTTGGA
ACAACATCAAGATGGATCCCTTGTTATTCCCACAACTGATGGGCCCGGAA
ATATTGCCCTACCAGATGTTCCATGGCCTGAAGATACATTTGATTCCACC
ATGAACCAGGCAGACATATCCATGTTCCTAAATGGCTTTATTGGCACAAG
TCGATCGGTCATGGATATTCTAAGCTTCGATCCCAATAGCGATTCGATTT
AAATTGATGTTAGTCGGGGTCTCTATGCCGACTCACTACATGGGATGGCA
GCCTGTGCAGATTTTATAGCATACTCAGTATTGACCGTCATCTACCGCGC
GCAGACCCATCCACGCGACGTAATGGCGGTTTCTTCCCAGTGCTATGCAT
CTGCGACTGCTGCTTTACAGAGTCATCTCAAGTGCTTCACCTACTTCCGC
GGTCGCCAGACACATAAGCAAACAGAATACGTAAATTGGTTCTGAAAGCA
CAAGAGGAAACCGACGTCCAGAGGTGCTGGACTTTCCTTTCTCTGGCATT
CAATATGTGCCAGAGCATCGGCTTACACCGACGTTCCACTTTAGAGAAGG
ATGAGTTTGCTATTGCTGAGGCAAAACGCCATGCGTTCTGGGCACTTTAC
ACCATTGACAAGAATATCTCTCTCAATATTGGCGTGACATCCCACTTTCA
GGACCACGACATCGATGCAGACCTTTATGCTCCTTCAAATGATCCCAAGT
ATCGCCCGTGGGACTTAATGGGGCTTGTGATCGTCGAATTCGCGAATGTT
CAGGGTAGAGTCTATGACCAGCTGTACTCTACCTCTGCTTGTCGAGCAGA
TGACGAGCAACGATCAGCATCAATTGAGCGGCTGTCCTCCGACCTAATGA
CAGTGCGGGACAAGCTTCTTGCGCTCAACCTCCTTTCTTCCTGGTCAGTC
AATCTTGGTTAGACTCCACCCGCGTGGAACATCTATGCCAGTCGATATAT
TTCCCGCTAGATCCTGTGCCACCTGGCTCGCTCACACTCTTCTATGGTAT
ACTTTTTTATGTGATCCGCGATTATCTTCATGCAGGAGATCCCGACCTGG
CACACTTTGACCTTCAATTAAGCCTTGAGCTCTGTGAGCGACACTTTGTC
GCTGGCTTGAGTAAACCTGAGATCATGTTCGAGCCAACTTTGGAGAAGAT
ACAGGCACTGTTGCTTGGGATGAATCGGAGTGGAGCACAATCACCTGCAC
AACTAAATCAGACATTGCTTCCTGTAGATCTGGTCGTAGCAGTGGTGAAG
AAGGTTAAAT back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005634 | nucleus |
Vocabulary: Molecular Function
| Term | Definition |
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| GO:0003677 | DNA binding |
| GO:0008270 | zinc ion binding |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006351 | transcription, DNA-templated |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
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| DBxref | InterPro:IPR007219 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch1 | supercontig | ch1:3239209..3241922 - |
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