You are here

Home

KJC3_001265-T1, KJC3_001265-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_001265-T1
Unique NameKJC3_001265-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch1:3251625..3254110-

Legend: exonfive_prime_UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_001265-T1 ID=KJC3_001265-T1|Name=KJC3_001265-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2486bp|location=Sequence derived from alignment at ch1:3251625..3254110- (Aspergillus niger KJC3)
TGTTTTCAAAACTGACCAACTCATCGAACGGCTTCGCAACGTGAGTGAGC
TCTTGCGTCTACATGTAATGGACAGGATACCTGTACTTGTGAGCTGCTTT
TTGATGCTTCCACAACATTAGTCCCATCCCTGCTTCTGAGAACAACTAAT
AGTTCCGTTGCGATATTCGAACCTAGCAACGATATAGTGGCTTCCTTATT
GTCGTCACTAACTTCGGTGTTCGTGCGCTGAGTGACAACGATATAAAGTA
TCCTCGTCGTCAGCTATTGAGAAAGAAATACGAGACCCCAGGTCTTGTAA
TACCCTTCACATATGGAATACCAACCAGGATTGGCGAGACTGCTCGAACC
TCAAAAGAAGGTAGAGAGGCTCCATAGACAACTCAGAGGCAAAGAAGACA
CCTTCCCAGCGGCAACCTGGCCATTTGCTGTCCAGCTGATGACGCGAGCG
ACGAGGCAACTCGAAACGCGGCATATCATAAGAAAAGGATACAGCCTTTG
GCATTGAAGAAGTGTGGGAAAGTATCCAACAATGCAGTAAAGCTGGACAT
ATTGGTTCTTAATGTGTTGCCTGCCACGTAGCAGCCAACTGGTAGGCCAA
GAACACATCACCACGCCACCTAAATAGCGAAGGACAGACCATGCAAACTT
AGCTTTGTAAGTATTTTTCTTGGCCTGAACTTGAGCGCAAAGATGAGACT
CATCAACGCGAAAACATACCAGTTGGAAGAATACCTCGACAGTGAAATCC
CCGAATACGCAATCCTATCACATACATGGGGAAAGGATGAGATTTCTTTT
CAGGATCTTCAGGCACTATCAACAGGCTCCAGGTACTGGGATCGTGTTGT
AGGAAGGGAGGGATTCCTCAAGATCAAGTATGTCTGTCAGCAAGCTATCA
GGGACGGCCTGGACTACGCTTGGGTCGATACATGTTGCATCAACAAAAGC
AGCAGTGCGGAAATATCTGAAGCGATCAACTCCATGTTCCAATGGTACAA
GCGATCAAGAAAGTGCCACGTTTACTTGTCTGACATTCCTAGCGGCTACG
GGGAGGTTCCGCTCGATGAGCAAGCCGGAAGTTCCGTCGAGCCCGCCAGA
AGGCGCAGGCCTAGTAAATATGATGGTACGATCAATGGCCCCTTTGCAAG
ATGTCGCTGGTTCACTCGAGGATGGACATTGCAGGAGTTGATCGCGCCTA
AAGACTTGACCTTTTACGGGTCCGGCTGGAACGTTCTTGGTACAAAAGCA
TCAATGACAGCCCTCATCTCTACGATCACTGGCATAGACCAGCGTGTTCT
TAGAGACTCGACAGACACCAAAGAGTCACTGAGATCAGTGTGTGTCGCAC
AGAAGATGTCATGGGCAGCTAGGAGGCAAACTTCGAAGATAGAGGATGAA
GCGTATTGTCTCCTCGGTCTGTTCGATGTTCATATGCCTATTCTCTATGG
CGAAGGCAAAGCTTCATTTGTCAGACTTCAGGAGGAGATCATCAAGAGTT
CCGATGATCACACGATCTTCGCGTGGAACTATTGTGACATTGAGCAAGAG
AGCCGGTATACAGTCCTTGCTCCGTCCTCAACCTGCTTTCTCAAAAACGT
CGTCCAGTGGACTTGTCCGCGTAACAGTGGGCCATACACAATGACAAACC
GAGGCCTCCACATCCAGCTCCCCGTCATATATCGATCCGGGTCTAAGGAT
AGCTGCCTCGCGCTCCTGGATTGCCACTATGAGGATGATGTCACAGGCGC
CTTGGCCCTTCCTCTTACGCCCCGCTCAGACAACACATTTGATATCGATT
ATGATATCTCGCGCGGGCGGGTAGTGAGAGTTGACTTAGGGCTAGAAACG
AGAGCCACGACTCGAGATCTCTATATCCGATCACAACCAAACGTCCCCGA
CCGAGGACCACAACTGACATGTCAATTCAACATCGACCAAGACGAGTCCA
GAGCAGCGACTCTGAGCATAACGGAGTACTACCCATCGCGAATCTGGGAT
GCTGAAAATCACAGACTGCGACTAAGCTCCAATGACTCGACTTCTCTGGA
AACATGGGCTGCTGTTAGATTACACAATTCTTCCGGGAGAGCCATTGGAG
TTGTATTCCACATCTCACCACATAGAAGGCCTGAAAGCACATCGACCTTC
AATGTACATGGTTGGATCTGCATGCAGACGATGAAGCCTGATATGACTCT
TTCGCAAATAGTCGATCAAGTCATCCGCGGCTGCGCCTCAGCTTCAGCTT
ACGAATACGGCAACCATGGATCTTGTACCCTTGCCTTAAGCCGAAGGCAT
CACATGGTTGCAACTAACACTTTTGTCAGTGGGAATGGCTCAGAGACGCT
TATAAACGTCACTGTCGCTAATCGGTATGCGCCTTGTACGTTGCGCCGTG
TCTTTGGCGCGACTCCGAAGCCCCCGAAAAATGCAGAAACGCCGTCAAAG
GAAAAGGATTTGCGACCAAGTATGTCTACAGATTAG
back to top

Coding sequence (CDS) from alignment at ch1:3251625..3254110-

>KJC3_001265-T1 ID=KJC3_001265-T1|Name=KJC3_001265-T1|organism=Aspergillus niger KJC3|type=CDS|length=2910bp|location=Sequence derived from alignment at ch1:3251625..3254110- (Aspergillus niger KJC3)
CGGCTACGGGGAGGTTCCGCTCGATGAGCAAGCCGGAAGTTCCGTCGAGC
CCGCCAGAAGGCGCAGGCCTAGTAAATATGATGGTACGATCAATGGCCCC
TTTGCAAGATGTCGCTGGTTCACTCGAGGATGGACATTGCAGGAGTTGAT
CGCGCCTAAAGACTTGACCTTTTACGGGTCCGGCTGGAACGTTCTTGGTA
CAAAAGCATCAATGACAGCCCTCATCTCTACGATCACTGGCATAGACCAG
CGTGTTCTTAGAGACTCGACAGACACCAAAGAGTCACTGAGATCAGTGTG
TGTCGCACAGAAGATGTCATGGGCAGCTAGGAGGCAAACTTCGAAGATAG
AGGATGAAGCGTATTGTCTCCTCGGTCTGTTCGATGTTCATATGCCTATT
CTCTATGGCGAAGGCAAAGCTTCATTTGTCAGACTTCAGGAGGAGATCAT
CAAGAGTTCCGATGATCACACGATCTTCGCGTGGAACTATTGTGACATTG
AGCAAGAGAGCCGGTATACAGTCCTTGCTCCGTCCTCAACCTGCTTTCTC
AAAAACGTCGTCCAGTGGACTTGTCCGCGTAACAGTGGGCCATACACAAT
GACAAACCGAGGCCTCCACATCCAGCTCCCCGTCATATATCGATCCGGGT
CTAAGGATAGCTGCCTCGCGCTCCTGGATTGCCACTATGAGGATGATGTC
ACAGGCGCCTTGGCCCTTCCTCTTACGCCCCGCTCAGACAACACATTTGA
TATCGATTATGATATCTCGCGCGGGCGGGTAGTGAGAGTTGACTTAGGGC
TAGAAACGAGAGCCACGACTCGAGATCTCTATATCCGATCACAACCAAAC
GTCCCCGACCGAGGACCACAACTGACATGTCAATTCAACATCGACCAAGA
CGAGTCCAGAGCAGCGACTCTGAGCATAACGGAGTACTACCCATCGCGAA
TCTGGGATGCTGAAAATCACAGACTGCGACTAAGCTCCAATGACTCGACT
TCTCTGGAAACATGGGCTGCTGTTAGATTACACAATTCTTCCGGGAGAGC
CATTGGAGTTGTATTCCACATCTCACCACATAGAAGGCCTGAAAGCACAT
CGACCTTCAATGTACATGGTTGGATCTGCATGCAGACGATGAAGCCTGAT
ATGACTCTTTCGCAAATAGTCGATCAAGTCATCCGCGGCTGCGCCTCAGC
TTCAGCTTACGAATACGGCAACCATGGATCTTGTACCCTTGCCTTAAGCC
GAAGGCATCACATGGTTGCAACTAACACTTTTGTCAGTGGGAATGGCTCA
GAGACGCTTATAAACGTCACTGTCGCTAATCGGTATGCGCCTTGTACGTT
GCGCCGTGTCTTTGGCGCGACTCCGAAGCCCCCGAAAAATGCAGAAACGC
CGTCAAAGGAAAAGGATTTGCGACCAAGTATGTCTACAGATTAGATGTTC
CAATGCGGCTACGGGGAGGTTCCGCTCGATGAGCAAGCCGGAAGTTCCGT
CGAGCCCGCCAGAAGGCGCAGGCCTAGTAAATATGATGGTACGATCAATG
GCCCCTTTGCAAGATGTCGCTGGTTCACTCGAGGATGGACATTGCAGGAG
TTGATCGCGCCTAAAGACTTGACCTTTTACGGGTCCGGCTGGAACGTTCT
TGGTACAAAAGCATCAATGACAGCCCTCATCTCTACGATCACTGGCATAG
ACCAGCGTGTTCTTAGAGACTCGACAGACACCAAAGAGTCACTGAGATCA
GTGTGTGTCGCACAGAAGATGTCATGGGCAGCTAGGAGGCAAACTTCGAA
GATAGAGGATGAAGCGTATTGTCTCCTCGGTCTGTTCGATGTTCATATGC
CTATTCTCTATGGCGAAGGCAAAGCTTCATTTGTCAGACTTCAGGAGGAG
ATCATCAAGAGTTCCGATGATCACACGATCTTCGCGTGGAACTATTGTGA
CATTGAGCAAGAGAGCCGGTATACAGTCCTTGCTCCGTCCTCAACCTGCT
TTCTCAAAAACGTCGTCCAGTGGACTTGTCCGCGTAACAGTGGGCCATAC
ACAATGACAAACCGAGGCCTCCACATCCAGCTCCCCGTCATATATCGATC
CGGGTCTAAGGATAGCTGCCTCGCGCTCCTGGATTGCCACTATGAGGATG
ATGTCACAGGCGCCTTGGCCCTTCCTCTTACGCCCCGCTCAGACAACACA
TTTGATATCGATTATGATATCTCGCGCGGGCGGGTAGTGAGAGTTGACTT
AGGGCTAGAAACGAGAGCCACGACTCGAGATCTCTATATCCGATCACAAC
CAAACGTCCCCGACCGAGGACCACAACTGACATGTCAATTCAACATCGAC
CAAGACGAGTCCAGAGCAGCGACTCTGAGCATAACGGAGTACTACCCATC
GCGAATCTGGGATGCTGAAAATCACAGACTGCGACTAAGCTCCAATGACT
CGACTTCTCTGGAAACATGGGCTGCTGTTAGATTACACAATTCTTCCGGG
AGAGCCATTGGAGTTGTATTCCACATCTCACCACATAGAAGGCCTGAAAG
CACATCGACCTTCAATGTACATGGTTGGATCTGCATGCAGACGATGAAGC
CTGATATGACTCTTTCGCAAATAGTCGATCAAGTCATCCGCGGCTGCGCC
TCAGCTTCAGCTTACGAATACGGCAACCATGGATCTTGTACCCTTGCCTT
AAGCCGAAGGCATCACATGGTTGCAACTAACACTTTTGTCAGTGGGAATG
GCTCAGAGACGCTTATAAACGTCACTGTCGCTAATCGGTATGCGCCTTGT
ACGTTGCGCCGTGTCTTTGGCGCGACTCCGAAGCCCCCGAAAAATGCAGA
AACGCCGTCAAAGGAAAAGGATTTGCGACCAAGTATGTCTACAGATTAGA
TGTTCCAATG
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_001265KJC3_001265Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001265-T1KJC3_001265-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001265-T1.cdsKJC3_001265-T1.cdsAspergillus niger KJC3CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001265-T1.exon3KJC3_001265-T1.exon3Aspergillus niger KJC3exon
KJC3_001265-T1.exon2KJC3_001265-T1.exon2Aspergillus niger KJC3exon
KJC3_001265-T1.exon1KJC3_001265-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001265-T1.utr5p2KJC3_001265-T1.utr5p2Aspergillus niger KJC3five_prime_UTR
KJC3_001265-T1.utr5p1KJC3_001265-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch1supercontigch1:3251625..3254110 -
Powered by Drupal