|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at ch1:3287011..3289017- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_001277-T1 ID=KJC3_001277-T1|Name=KJC3_001277-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2007bp|location=Sequence derived from alignment at ch1:3287011..3289017- (Aspergillus niger KJC3)
ACGAGATATTGGGCGATACCGTCAATCAAAATAAACAAGAATCGACCCGA
AGGTTATCGCCGGAAAAAGAATCAACTCGAATCATGAAATGAAGCAGTTT
GACTATCAGCCAAAACGTGATGTAATTCAACAGCAGATAAAGTCCGATGG
CTGATCCATCGGCCGGGATGCCAAGGTCAATTTATCACATACAGAAGGAT
CTGCGCATCGGAGCCGTTGGTTCGGCCACCTATATGATATCTTTAGCTCA
TCCGATGGCCAGGTATATCATTAACATTCGGGGAAGAAACTCCCAGTACA
AAACAGGCGAGAATCGTTTCCACAAGTAGCAGAAATTACCTGCATCGAAG
TCACTATTAGAAGGACAATGTTTGGTACTAACCGCACTGACGTATGCGAG
ACAAGCATACTTCCAGATTTGATATCATGACAGATGCGAGAGGAAAGCTT
AAGGGCGCCGCCTGCTTGAATAGGCAATAAACATCAGCCCTGTCCAGTCT
ATGCTTCCATGGTTCTGCAAAGTCCCAGAATGCCTGGCTGCCTATCCTTG
AAACTGCTGACATCTACCAGATTAAGCACACCTCATTCTGTCATACATGA
TTACTATCTTTACAGTCCCTATAGACTACACCTTCCGTTCTTTACCTCAC
AGAGTCGCTTATGGAGATCCCTTGCCTGAGCCCTGCAGTTGCAGACGATA
TTGTCCCAGATCTAGCCCAGATATTCAATGATAACCCATTCAAGTCACTG
AGAGAACAGAAAATCAGCGTCCCTGTTCTCTGCGGCCCGCATGAGCAAGG
CCCCACCGACACTCACATCGACATCTTTGGACAGGAGTTTCGAACGCATT
CAAGTCTAATCAAGGAGTACACTGGAATCTGGAAGGAACGGCAGCGCGGC
GAGTATGCCGAGCGTCGCGTACACTATTTCGAGGCGAGAACTGAGAAAGA
TGGTGGTTGGGGGATCTACCGAAAGGGAGCGGTATGCTGAGTCGCTCTAT
ATACTCGAGTCCAATGTACGCTGACAAGGTGGCATTAACTCCGCAGAGAT
ATTACCGCGATTATCCCGAAATACCAGACGAACGTATCCCGAGCGCCATT
GAGTCCTTCCATTGCTTCCTGCAAGCGTTATATCTCAAGCCTGTACCATA
CGTTGGTATCAAAGGATGGCGAAGGATGGTGTTGCTCGGAATACGCTTCC
AGGCAGTACCCCGAGTGCGTGAATATATCGAGAAGATTATACTTCCCTGG
ACTCTTACCTCTAAGCCCCTCCTTGGCCTTACTGACGATATTCTCGCCTA
TACTAAAATGGCGCAAGACATTCAGTGTGCCCAGCTCTACCGCGAATGTC
TCATCCATTTGGTCGGAATGGCGCAATACTGGGGGCGGAACGAGTTCCAC
AACGCTGAGCACATACTCACTCCCAGTGCATACGCTTCATTGATTCGTCA
CGTTGGAACTCAGCGTCAGCTTATTGAGAAAGCGGATGTCGCTCTTCACA
CTTTTATTCGAACCCTAGCAACGCAGAAACCGCGACGGATACCGAACTTC
CTACTCCGGCAATTCACAGATACGGTGGATAACATTACCGGTCTAAATGG
GCGCAACATGAACTCGCTAGGTTATTATCAACATATACGCCTGGTACTCA
ACGATATGCAGCTGAGAATACCACGGGGTTCTACCTACAATATGTGTCAT
AGACTCTGGCAGTTCATTGGATGTCTGTGTGTGAACGGTCTTCTGTATAC
ACAAGATCAAGTCAAAGGCTACCCTGTCTGCATATCGCCTACGGATATTG
AGCTACCATGGGTGCTTGCTAACGCACCCGAGGCCCCAGTGGAAGATCAA
GTCCGGGACGCCATAATGGAAGGTTAACAAGGAAGCACATGAAGATTGTT
GGAGGGTGTTATTGAGAACACGAATCAAAAATGTCATAGCGCATACCTTT
TATCAGAATTATTGAATAGTGCGAGTTCTAGTTGCAAATGCCAAAGCGTA
CTTACAG back to topCoding sequence (CDS) from alignment at ch1:3287011..3289017- >KJC3_001277-T1 ID=KJC3_001277-T1|Name=KJC3_001277-T1|organism=Aspergillus niger KJC3|type=CDS|length=2304bp|location=Sequence derived from alignment at ch1:3287011..3289017- (Aspergillus niger KJC3)
AGATATTACCGCGATTATCCCGAAATACCAGACGAACGTATCCCGAGCGC
CATTGAGTCCTTCCATTGCTTCCTGCAAGCGTTATATCTCAAGCCTGTAC
CATACGTTGGTATCAAAGGATGGCGAAGGATGGTGTTGCTCGGAATACGC
TTCCAGGCAGTACCCCGAGTGCGTGAATATATCGAGAAGATTATACTTCC
CTGGACTCTTACCTCTAAGCCCCTCCTTGGCCTTACTGACGATATTCTCG
CCTATACTAAAATGGCGCAAGACATTCAGTGTGCCCAGCTCTACCGCGAA
TGTCTCATCCATTTGGTCGGAATGGCGCAATACTGGGGGCGGAACGAGTT
CCACAACGCTGAGCACATACTCACTCCCAGTGCATACGCTTCATTGATTC
GTCACGTTGGAACTCAGCGTCAGCTTATTGAGAAAGCGGATGTCGCTCTT
CACACTTTTATTCGAACCCTAGCAACGCAGAAACCGCGACGGATACCGAA
CTTCCTACTCCGGCAATTCACAGATACGGTGGATAACATTACCGGTCTAA
ATGGGCGCAACATGAACTCGCTAGGTTATTATCAACATATACGCCTGGTA
CTCAACGATATGCAGCTGAGAATACCACGGGGTTCTACCTACAATATGTG
TCATAGACTCTGGCAGTTCATTGGATGTCTGTGTGTGAACGGTCTTCTGT
ATACACAAGATCAAGTCAAAGGCTACCCTGTCTGCATATCGCCTACGGAT
ATTGAGCTACCATGGGTGCTTGCTAACGCACCCGAGGCCCCAGTGGAAGA
TCAAGTCCGGGACGCCATAATGGAAGGTTAAATGGAGATCCCTTGCCTGA
GCCCTGCAGTTGCAGACGATATTGTCCCAGATCTAGCCCAGATATTCAAT
GATAACCCATTCAAGTCACTGAGAGAACAGAAAATCAGCGTCCCTGTTCT
CTGCGGCCCGCATGAGCAAGGCCCCACCGACACTCACATCGACATCTTTG
GACAGGAGTTTCGAACGCATTCAAGTCTAATCAAGGAGTACACTGGAATC
TGGAAGGAACGGCAGCGCGGCGAGTATGCCGAGCGTCGCGTACACTATTT
CGAGGCGAGAACTGAGAAAGATGGTGGTTGGGGGATCTACCGAAAGGGAG
CGAGATATTACCGCGATTATCCCGAAATACCAGACGAACGTATCCCGAGC
GCCATTGAGTCCTTCCATTGCTTCCTGCAAGCGTTATATCTCAAGCCTGT
ACCATACGTTGGTATCAAAGGATGGCGAAGGATGGTGTTGCTCGGAATAC
GCTTCCAGGCAGTACCCCGAGTGCGTGAATATATCGAGAAGATTATACTT
CCCTGGACTCTTACCTCTAAGCCCCTCCTTGGCCTTACTGACGATATTCT
CGCCTATACTAAAATGGCGCAAGACATTCAGTGTGCCCAGCTCTACCGCG
AATGTCTCATCCATTTGGTCGGAATGGCGCAATACTGGGGGCGGAACGAG
TTCCACAACGCTGAGCACATACTCACTCCCAGTGCATACGCTTCATTGAT
TCGTCACGTTGGAACTCAGCGTCAGCTTATTGAGAAAGCGGATGTCGCTC
TTCACACTTTTATTCGAACCCTAGCAACGCAGAAACCGCGACGGATACCG
AACTTCCTACTCCGGCAATTCACAGATACGGTGGATAACATTACCGGTCT
AAATGGGCGCAACATGAACTCGCTAGGTTATTATCAACATATACGCCTGG
TACTCAACGATATGCAGCTGAGAATACCACGGGGTTCTACCTACAATATG
TGTCATAGACTCTGGCAGTTCATTGGATGTCTGTGTGTGAACGGTCTTCT
GTATACACAAGATCAAGTCAAAGGCTACCCTGTCTGCATATCGCCTACGG
ATATTGAGCTACCATGGGTGCTTGCTAACGCACCCGAGGCCCCAGTGGAA
GATCAAGTCCGGGACGCCATAATGGAAGGTTAAATGGAGATCCCTTGCCT
GAGCCCTGCAGTTGCAGACGATATTGTCCCAGATCTAGCCCAGATATTCA
ATGATAACCCATTCAAGTCACTGAGAGAACAGAAAATCAGCGTCCCTGTT
CTCTGCGGCCCGCATGAGCAAGGCCCCACCGACACTCACATCGACATCTT
TGGACAGGAGTTTCGAACGCATTCAAGTCTAATCAAGGAGTACACTGGAA
TCTGGAAGGAACGGCAGCGCGGCGAGTATGCCGAGCGTCGCGTACACTAT
TTCGAGGCGAGAACTGAGAAAGATGGTGGTTGGGGGATCTACCGAAAGGG
AGCG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_001277-T1.utr3p1 | KJC3_001277-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_001277-T1.utr5p1 | KJC3_001277-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch1 | supercontig | ch1:3287011..3289017 - |
|
