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KJC3_001279-T1, KJC3_001279-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_001279-T1
Unique NameKJC3_001279-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch1:3292002..3293584-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_001279-T1 ID=KJC3_001279-T1|Name=KJC3_001279-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1583bp|location=Sequence derived from alignment at ch1:3292002..3293584- (Aspergillus niger KJC3)
ATGTACGACTCTCTTCCTAGCTACCGGGAGACCTCTTCCGCGCACACTCA
TGAAGAGGAACATACGCCACTACTTCCCAAGCAGGTCGACCCCGACCCCG
ACTCCAAAAGCGCAAAATCGTCGGTTTCCTTTCTGGTCGAATTTTTCCGG
CTGTTGAAGGACTCCATACCAGTCATTCTGGCATACACGCTGCAAAACAG
CCTACAAACCACCTCGGTGTTGATTGTGGGACGGACCTCTCCGGAGAACC
TGGCCACCACAGCTTTCTCACTGATGTTTGCCATGGTCACGGCATGGATG
ATCGCCTTAGGCGGGACCACCGCATTGGACACACTAGCCTCCTCAACGTT
CACAGGCAGCTCGAATAAGCATGATCTCGGAATTCTGTTGCAGCGGGCAT
TCTTTGTCCTCGGCCTGTTCTATGTCCCCGTTGCAATTCTTTGGACATGC
TCGGAGCCTGTGTTTCTTCTGCTTGGCCAGGACCCCCAGCTTTCACGGGA
TAGTGCGCGTTTCCTAACTTGCTTGATCCCTGGCGGTCTGGGTTATATCT
ACTTCGAGGCCATGAAAAAATATCTGCAAGCACAGGGTAAGTCTTTTTCC
GACGTGCTTCTCAGACATCATATCTCTGGGAAGTTTGTTAATGAGAGGAT
ACAGGTATTATGCGCCCTGGGACGTATGTCTTGCTGATTACGGTGCCGTT
TAATGCATTGCTCAATTACCTGTTCTGTTACACCTTTCGCATGGGGTTGC
TTGGTGCGCCATTTGCCACCGGCATTTCCTACTGGCTGTCCTTTGCACTG
CTCGTGTTGTATGCCCGATTCATTGCCGGCTCCGAATGCTGGGGCGGCTG
GTCGCGCAAAGCATTCGAGAATCTTGGGACTTTCGCCCGATTGGCCTTTC
TGGGCGTGGTGCATGTAGGCACCGAGTGGTGGGCCTTTGAGATAGTAGCT
CTTGCAGCCGGAAGGCTGGGAACAATCCCACTGGCGGCTCAGAGCGTCAT
CATGACCGCAGACCAAGTGCTCAACACAATCCCATTTGGCGTGGGAGTCG
CTACATCTTCACGGGTGGGGAGCCTGCTAGGCTCCCGGGATGCAGCTGGT
GCATCGAGAGCGGCCAACACCGCGGCCTGGCTAAGTATGGCGCTGGGAGG
GGCCGTGCTGGCTGTGCTGATGGGGACTCGACACGTCTTTGCAAAGATAT
TCAACTCCGATGAAGGGGTCGTACAGCTCACTGCGGAGGTTCTACCATGG
GTGGCGTTGTTCCAGATCGCCGATGGATTGAACGGTAGCTGTGGAGGAAG
CCTTAGGGGTATGGGAAGACAGCATGTCGGCGCGCTAGTCAACCTGGCCA
GTTATTATTGTGGTGCACTACCTCTAGGTATTTGGCTAGCCTTCAATGGA
TGGGGACTGAAAGGTCTTTGGGTGGGACAGTGCATCGCATTGTATCTTGT
GGGGGCACTGGAGTGGACAATCGTGGCCTTCAGTAACTGGGAAGGCGAGG
TCGATAAGGCGTTTCAGCGAATGGATATCCATGACCGATTGGAGGTTGGA
CACACCACCAATGGTGCCACGACTGTTGTGTAA
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Coding sequence (CDS) from alignment at ch1:3292002..3293584-

>KJC3_001279-T1 ID=KJC3_001279-T1|Name=KJC3_001279-T1|organism=Aspergillus niger KJC3|type=CDS|length=3030bp|location=Sequence derived from alignment at ch1:3292002..3293584- (Aspergillus niger KJC3)
GTATTATGCGCCCTGGGACGTATGTCTTGCTGATTACGGTGCCGTTTAAT
GCATTGCTCAATTACCTGTTCTGTTACACCTTTCGCATGGGGTTGCTTGG
TGCGCCATTTGCCACCGGCATTTCCTACTGGCTGTCCTTTGCACTGCTCG
TGTTGTATGCCCGATTCATTGCCGGCTCCGAATGCTGGGGCGGCTGGTCG
CGCAAAGCATTCGAGAATCTTGGGACTTTCGCCCGATTGGCCTTTCTGGG
CGTGGTGCATGTAGGCACCGAGTGGTGGGCCTTTGAGATAGTAGCTCTTG
CAGCCGGAAGGCTGGGAACAATCCCACTGGCGGCTCAGAGCGTCATCATG
ACCGCAGACCAAGTGCTCAACACAATCCCATTTGGCGTGGGAGTCGCTAC
ATCTTCACGGGTGGGGAGCCTGCTAGGCTCCCGGGATGCAGCTGGTGCAT
CGAGAGCGGCCAACACCGCGGCCTGGCTAAGTATGGCGCTGGGAGGGGCC
GTGCTGGCTGTGCTGATGGGGACTCGACACGTCTTTGCAAAGATATTCAA
CTCCGATGAAGGGGTCGTACAGCTCACTGCGGAGGTTCTACCATGGGTGG
CGTTGTTCCAGATCGCCGATGGATTGAACGGTAGCTGTGGAGGAAGCCTT
AGGGGTATGGGAAGACAGCATGTCGGCGCGCTAGTCAACCTGGCCAGTTA
TTATTGTGGTGCACTACCTCTAGGTATTTGGCTAGCCTTCAATGGATGGG
GACTGAAAGGTCTTTGGGTGGGACAGTGCATCGCATTGTATCTTGTGGGG
GCACTGGAGTGGACAATCGTGGCCTTCAGTAACTGGGAAGGCGAGGTCGA
TAAGGCGTTTCAGCGAATGGATATCCATGACCGATTGGAGGTTGGACACA
CCACCAATGGTGCCACGACTGTTGTGTAAATGTACGACTCTCTTCCTAGC
TACCGGGAGACCTCTTCCGCGCACACTCATGAAGAGGAACATACGCCACT
ACTTCCCAAGCAGGTCGACCCCGACCCCGACTCCAAAAGCGCAAAATCGT
CGGTTTCCTTTCTGGTCGAATTTTTCCGGCTGTTGAAGGACTCCATACCA
GTCATTCTGGCATACACGCTGCAAAACAGCCTACAAACCACCTCGGTGTT
GATTGTGGGACGGACCTCTCCGGAGAACCTGGCCACCACAGCTTTCTCAC
TGATGTTTGCCATGGTCACGGCATGGATGATCGCCTTAGGCGGGACCACC
GCATTGGACACACTAGCCTCCTCAACGTTCACAGGCAGCTCGAATAAGCA
TGATCTCGGAATTCTGTTGCAGCGGGCATTCTTTGTCCTCGGCCTGTTCT
ATGTCCCCGTTGCAATTCTTTGGACATGCTCGGAGCCTGTGTTTCTTCTG
CTTGGCCAGGACCCCCAGCTTTCACGGGATAGTGCGCGTTTCCTAACTTG
CTTGATCCCTGGCGGTCTGGGTTATATCTACTTCGAGGCCATGAAAAAAT
ATCTGCAAGCACAGGGTATTATGCGCCCTGGGACGTATGTCTTGCTGATT
ACGGTGCCGTTTAATGCATTGCTCAATTACCTGTTCTGTTACACCTTTCG
CATGGGGTTGCTTGGTGCGCCATTTGCCACCGGCATTTCCTACTGGCTGT
CCTTTGCACTGCTCGTGTTGTATGCCCGATTCATTGCCGGCTCCGAATGC
TGGGGCGGCTGGTCGCGCAAAGCATTCGAGAATCTTGGGACTTTCGCCCG
ATTGGCCTTTCTGGGCGTGGTGCATGTAGGCACCGAGTGGTGGGCCTTTG
AGATAGTAGCTCTTGCAGCCGGAAGGCTGGGAACAATCCCACTGGCGGCT
CAGAGCGTCATCATGACCGCAGACCAAGTGCTCAACACAATCCCATTTGG
CGTGGGAGTCGCTACATCTTCACGGGTGGGGAGCCTGCTAGGCTCCCGGG
ATGCAGCTGGTGCATCGAGAGCGGCCAACACCGCGGCCTGGCTAAGTATG
GCGCTGGGAGGGGCCGTGCTGGCTGTGCTGATGGGGACTCGACACGTCTT
TGCAAAGATATTCAACTCCGATGAAGGGGTCGTACAGCTCACTGCGGAGG
TTCTACCATGGGTGGCGTTGTTCCAGATCGCCGATGGATTGAACGGTAGC
TGTGGAGGAAGCCTTAGGGGTATGGGAAGACAGCATGTCGGCGCGCTAGT
CAACCTGGCCAGTTATTATTGTGGTGCACTACCTCTAGGTATTTGGCTAG
CCTTCAATGGATGGGGACTGAAAGGTCTTTGGGTGGGACAGTGCATCGCA
TTGTATCTTGTGGGGGCACTGGAGTGGACAATCGTGGCCTTCAGTAACTG
GGAAGGCGAGGTCGATAAGGCGTTTCAGCGAATGGATATCCATGACCGAT
TGGAGGTTGGACACACCACCAATGGTGCCACGACTGTTGTGTAAATGTAC
GACTCTCTTCCTAGCTACCGGGAGACCTCTTCCGCGCACACTCATGAAGA
GGAACATACGCCACTACTTCCCAAGCAGGTCGACCCCGACCCCGACTCCA
AAAGCGCAAAATCGTCGGTTTCCTTTCTGGTCGAATTTTTCCGGCTGTTG
AAGGACTCCATACCAGTCATTCTGGCATACACGCTGCAAAACAGCCTACA
AACCACCTCGGTGTTGATTGTGGGACGGACCTCTCCGGAGAACCTGGCCA
CCACAGCTTTCTCACTGATGTTTGCCATGGTCACGGCATGGATGATCGCC
TTAGGCGGGACCACCGCATTGGACACACTAGCCTCCTCAACGTTCACAGG
CAGCTCGAATAAGCATGATCTCGGAATTCTGTTGCAGCGGGCATTCTTTG
TCCTCGGCCTGTTCTATGTCCCCGTTGCAATTCTTTGGACATGCTCGGAG
CCTGTGTTTCTTCTGCTTGGCCAGGACCCCCAGCTTTCACGGGATAGTGC
GCGTTTCCTAACTTGCTTGATCCCTGGCGGTCTGGGTTATATCTACTTCG
AGGCCATGAAAAAATATCTGCAAGCACAGG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
Vocabulary: Molecular Function
TermDefinition
GO:0042910xenobiotic transmembrane transporter activity
GO:0015297antiporter activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_001279KJC3_001279Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001279-T1KJC3_001279-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001279-T1.cdsKJC3_001279-T1.cdsAspergillus niger KJC3CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001279-T1.exon2KJC3_001279-T1.exon2Aspergillus niger KJC3exon
KJC3_001279-T1.exon1KJC3_001279-T1.exon1Aspergillus niger KJC3exon


Properties
Property NameValue
DBxrefInterPro:IPR002528
DBxrefPFAM:PF01554
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch1supercontigch1:3292002..3293584 -
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