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KJC3_001281-T1, KJC3_001281-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_001281-T1
Unique NameKJC3_001281-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch1:3297010..3300159-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_001281-T1 ID=KJC3_001281-T1|Name=KJC3_001281-T1|organism=Aspergillus niger KJC3|type=mRNA|length=3150bp|location=Sequence derived from alignment at ch1:3297010..3300159- (Aspergillus niger KJC3)
GGAGGTTCGGGCCATCCATCATTCAGTCCAGCAAGCAAGCAAGCAAGCAA
GCCTCACATCTCCCGTCGTCTAGCATTGTTTTGCGGCTTCAGCATTCTCT
CTCTTCATCATCTCCCACTGAGGAATCTTTGTACGACGCGCATCATACAT
GCGCAACCTGGTTTATCCTAAATATCACGTGCTTGAATCCCTTAACCGCC
CCTGCGACGCTGTGGATCGGCATTCCACCCGCGTCTTTTCGCGCCGTGTC
GCTTTCGCGCTTGAAGGTCGACAATTACCCCGGATTGCTATCGTGAGTCT
ATAGCCTGTTCTCACCTTAGCTCATCCGGGCACCTCGAAGTCTTTGACTT
TTCTCAATGGTCTTTCGCGAACAAAGACTTGAGGAGGTAGCTTTCTTTCA
CTTGTTCTTCATTTCATCTCTAACGTACCTCGTGTAGGATACATCTGAAT
TGGTCATCCTGGTCGCAGCCATAGTGTAGCACAAGCTCGATTGCAGACTG
CCCGTTCAAAATTATTCCTGATCGCGCTCTCTGAACTGGATCTCTCCTAC
TTCATCGCAGTGCTTTGGCATCTCCAGCCCTCGATTTATGCCTAAGGCTG
CAAGCGTCTTATTCAGTTCCATCTTCTCACAGTGAGTAGAGAGCTTTGAG
TCCGACTGCTATAGGACTTTCTCTTCCCTTAACCCTCAGTATGCAAAGCT
GTACTTTATGCGCTCTAGCTAACAGAAACATCAAGCCGATTCTTCTCCGC
ATTGAACTTCCAATGCCTGCTAGACGCGGCGCCACCAGGCGCGCGGGGTC
TACTCGCTCCGACATAGGGAGTGCGTCGACGTATTTTCAGTCCAAACTGG
GTCCGGAAGCAAGGACACAGGCTCTGCCAAACCTTCCAACCAAGCAGTCG
TTCGCTTATGGATCTGCTGAGACGCCAATCCTCCCGCGGGAGCTCAAGAT
TCAGCCTCATATGGATCTGACCGAGATGGCCGACGCGATCGACAAGGGAA
TCGAGGATGCTAAGGATCGACAGATGAAAGAGAAAGAAACCACCCAGGAC
AAATCTCGTCGACAGAAGTCCCCTTCTATTACCCGTTCCCCGGTTCGGCG
GAGTCGACGGGAGCCGACCCCGGATGAGTTGCAGCTTCTCGACAACCTGC
GCGAGGCAACCAAGTCTCCTACTCCTGTACGGGGCAACTACAGCAACAAC
GACCAATCCACCGCCACCCCCACGCCTCCTATCCCGCACACTCTTTCTAC
CGCCTCAAGTCCTGCGCAGTCTCTACCTGTACCCAGATATCCCCACGTAC
CAGCCGAAAACCTGTATCCATCTCCTATGGGGCGGTTTGGCCCACAATTG
CACGACGGGCCACCGTTAGGAAGCTCCCCGCTACCGGACGACTCGTCGTT
ATATTCGTTCACCGTTGAGCGAGCCATCAACTCCGATGAATTGACACGGA
CGCTTTCCGATGGAAAGAATATCAAGGCACCCCCTCGTCGATTTTCCGGA
CTGGCTTTTGCCAACGAGCCTATTCACGAAGAAGAAGAGCCGGACTCAAG
GCTTCTGAAAACAAAATCGAGATCGCCCTCCCTACAGCCTAGCTACGAGG
ACTTCCAGATAGAGCCTTCACCAGAGCCGGAGCCACAGTCGGAACCCGAG
TCTGTGCAAGAGCTGGAACTAGAGCCTACGCCGGAGCCAGAGCCTATTCC
AGAGCTGGAGCCTATGCCAGAGCCTACGCCGGAGCCGGAGGTTATCAGAG
AGAAGTCTCCTGCAGCCCAGTTTACCGCGCCCACAAAGACACTTATCCCT
AATGCATATGCACGGAGGACTCCATCACAAGAACCATCAGTGGATGATGG
CCAGCAAAATATTCGTCAGACAGGCCAGTCCTGGTCCTGGGTAGGAAGTC
TATCAGCACAGCTGCCCAGCGTATCTACAGTCGCTCGTATACTCGCAGGA
ATAGCTTTGGCAGCAGCGACAGTTTACCTGGTTGCCTTTGGCGGCATTCC
CTCCCTTTCTCGACCGCCACAGTATATTCCGATGGATGAAAACAACATGC
TAGCAGTCAGCAGCCTTACGGACCAGATGTCTCGAATTGGGGCGCAGGTA
TCATCACTGGCGAAGGAAATGCGCACCGTCAAATGGGATGTGAACGAGGT
GCAATCGGAGGTGCGATCATCACCCACTCCGATCATGCCGCCAAGCAGAG
GAAGCACCGATCTTGGTCCTCCAACGGAGCAAAAAACAAACTTTCTGAGC
ATTGGACTAGGAGTTATTGTTATTCCAGGTCTCACAAGTCCAACAGTCGG
ACACAAGCTCAGTGCTTGGCAGTGGGCATATGTTAATCTATGGAGAGGTA
GTCATTATCGTCCCGCATCACCACCGCTCGCGGCTTTGGTTCCCTGGGAA
GATTATGGAGATTGCTGGTGCAGCACACCCCGGGATGGCATGTCGCAGAT
TGGCATTGACCTAGGCCAAAAGATTGTACCGGAGGAAGTAGCCGTCGAAC
ACATGCCAAAGACGGCTACATTGAAGCCCGAAAATGCCCCCCGGGAGATG
GAGCTCTGGGCCCAGTACGTACTCGTCCAGAAGGGAACCAGCCGACCTGC
AAGAACGCAAGCGGAGCGATTTTCCATCCACAAGCCGATTATGGACGCCC
TCCGGTCCGCGTGGCCCACCGAGGATCCGACTGCGTACTCTGATGATCCG
CTCCTAGGACCGACATATTACCGAGTCGGGAAATTCACATACGATATCCA
CGGCTCGCACCACGTGCAGCGATTCGAACTAGACGCGGTGATCGACTCCC
CAGAAGTTCGGGTGGACAGGGTTGTATTTCGGGCCACGTCGAACTGGGGC
GGCAATCACACGTGTATCTATCGACTGAAGCTATTCGGTCATGTATAGCA
TTTTTCTTTTCTGCGTTGTCGATCTCATCACGTTGGCGGCGGCGTATCGT
GTTCAAAATGTTGTTCTTCTCTTATTTGGGTGGCATTTGGTGGGAATGGG
AAGATACCAGGCAAATGGCAATCGTGATAGACGGTCTGTTTTGTTATTTA
ATTCGTGGAGCAGACGTTTTGGACGACTCGTGACTTTGCTTGGTACTTGC
ATGCGATTCATCGTAATTAGCGATTATTGAATATATGCATCTGCGCATGC
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Coding sequence (CDS) from alignment at ch1:3297010..3300159-

>KJC3_001281-T1 ID=KJC3_001281-T1|Name=KJC3_001281-T1|organism=Aspergillus niger KJC3|type=CDS|length=2136bp|location=Sequence derived from alignment at ch1:3297010..3300159- (Aspergillus niger KJC3)
ATGCCTGCTAGACGCGGCGCCACCAGGCGCGCGGGGTCTACTCGCTCCGA
CATAGGGAGTGCGTCGACGTATTTTCAGTCCAAACTGGGTCCGGAAGCAA
GGACACAGGCTCTGCCAAACCTTCCAACCAAGCAGTCGTTCGCTTATGGA
TCTGCTGAGACGCCAATCCTCCCGCGGGAGCTCAAGATTCAGCCTCATAT
GGATCTGACCGAGATGGCCGACGCGATCGACAAGGGAATCGAGGATGCTA
AGGATCGACAGATGAAAGAGAAAGAAACCACCCAGGACAAATCTCGTCGA
CAGAAGTCCCCTTCTATTACCCGTTCCCCGGTTCGGCGGAGTCGACGGGA
GCCGACCCCGGATGAGTTGCAGCTTCTCGACAACCTGCGCGAGGCAACCA
AGTCTCCTACTCCTGTACGGGGCAACTACAGCAACAACGACCAATCCACC
GCCACCCCCACGCCTCCTATCCCGCACACTCTTTCTACCGCCTCAAGTCC
TGCGCAGTCTCTACCTGTACCCAGATATCCCCACGTACCAGCCGAAAACC
TGTATCCATCTCCTATGGGGCGGTTTGGCCCACAATTGCACGACGGGCCA
CCGTTAGGAAGCTCCCCGCTACCGGACGACTCGTCGTTATATTCGTTCAC
CGTTGAGCGAGCCATCAACTCCGATGAATTGACACGGACGCTTTCCGATG
GAAAGAATATCAAGGCACCCCCTCGTCGATTTTCCGGACTGGCTTTTGCC
AACGAGCCTATTCACGAAGAAGAAGAGCCGGACTCAAGGCTTCTGAAAAC
AAAATCGAGATCGCCCTCCCTACAGCCTAGCTACGAGGACTTCCAGATAG
AGCCTTCACCAGAGCCGGAGCCACAGTCGGAACCCGAGTCTGTGCAAGAG
CTGGAACTAGAGCCTACGCCGGAGCCAGAGCCTATTCCAGAGCTGGAGCC
TATGCCAGAGCCTACGCCGGAGCCGGAGGTTATCAGAGAGAAGTCTCCTG
CAGCCCAGTTTACCGCGCCCACAAAGACACTTATCCCTAATGCATATGCA
CGGAGGACTCCATCACAAGAACCATCAGTGGATGATGGCCAGCAAAATAT
TCGTCAGACAGGCCAGTCCTGGTCCTGGGTAGGAAGTCTATCAGCACAGC
TGCCCAGCGTATCTACAGTCGCTCGTATACTCGCAGGAATAGCTTTGGCA
GCAGCGACAGTTTACCTGGTTGCCTTTGGCGGCATTCCCTCCCTTTCTCG
ACCGCCACAGTATATTCCGATGGATGAAAACAACATGCTAGCAGTCAGCA
GCCTTACGGACCAGATGTCTCGAATTGGGGCGCAGGTATCATCACTGGCG
AAGGAAATGCGCACCGTCAAATGGGATGTGAACGAGGTGCAATCGGAGGT
GCGATCATCACCCACTCCGATCATGCCGCCAAGCAGAGGAAGCACCGATC
TTGGTCCTCCAACGGAGCAAAAAACAAACTTTCTGAGCATTGGACTAGGA
GTTATTGTTATTCCAGGTCTCACAAGTCCAACAGTCGGACACAAGCTCAG
TGCTTGGCAGTGGGCATATGTTAATCTATGGAGAGGTAGTCATTATCGTC
CCGCATCACCACCGCTCGCGGCTTTGGTTCCCTGGGAAGATTATGGAGAT
TGCTGGTGCAGCACACCCCGGGATGGCATGTCGCAGATTGGCATTGACCT
AGGCCAAAAGATTGTACCGGAGGAAGTAGCCGTCGAACACATGCCAAAGA
CGGCTACATTGAAGCCCGAAAATGCCCCCCGGGAGATGGAGCTCTGGGCC
CAGTACGTACTCGTCCAGAAGGGAACCAGCCGACCTGCAAGAACGCAAGC
GGAGCGATTTTCCATCCACAAGCCGATTATGGACGCCCTCCGGTCCGCGT
GGCCCACCGAGGATCCGACTGCGTACTCTGATGATCCGCTCCTAGGACCG
ACATATTACCGAGTCGGGAAATTCACATACGATATCCACGGCTCGCACCA
CGTGCAGCGATTCGAACTAGACGCGGTGATCGACTCCCCAGAAGTTCGGG
TGGACAGGGTTGTATTTCGGGCCACGTCGAACTGGGGCGGCAATCACACG
TGTATCTATCGACTGAAGCTATTCGGTCATGTATAG
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_001281KJC3_001281Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001281-T1KJC3_001281-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001281-T1.cdsKJC3_001281-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001281-T1.utr3p1KJC3_001281-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001281-T1.exon3KJC3_001281-T1.exon3Aspergillus niger KJC3exon
KJC3_001281-T1.exon2KJC3_001281-T1.exon2Aspergillus niger KJC3exon
KJC3_001281-T1.exon1KJC3_001281-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001281-T1.utr5p3KJC3_001281-T1.utr5p3Aspergillus niger KJC3five_prime_UTR
KJC3_001281-T1.utr5p2KJC3_001281-T1.utr5p2Aspergillus niger KJC3five_prime_UTR
KJC3_001281-T1.utr5p1KJC3_001281-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR012919
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch1supercontigch1:3297010..3300159 -
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