You are here

KJC3_001285-T1, KJC3_001285-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_001285-T1
Unique NameKJC3_001285-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch1:3308296..3309252-

Legend: CDSpolypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_001285-T1 ID=KJC3_001285-T1|Name=KJC3_001285-T1|organism=Aspergillus niger KJC3|type=mRNA|length=957bp|location=Sequence derived from alignment at ch1:3308296..3309252- (Aspergillus niger KJC3)
ATGGCCCGCAACCCTTCGCGTCTGCTCCCTCCGTCTCGTAGTCTGCAATT GACTACTAGTAAACGGCAATTCGGCACCGGTGCCTCCATCCTACCCCTCC TCTCCCCGCCCCGATACAGGCCGCTCCGATCATCATTAATATCATCAACA CCATCATCTTCCCCTCTCGCGCATCGCATTCCCACCTTCGCTACTCCCCT CCGAACCATCACCACCAGCAGCAACAGCGCCCCCACCAAAATGACCACAA CCATCGACCCCAAATACGCCCAACTCTTCCAATCCCTGGAATCCCAATTC CAAACCACCACCCTCCCGCACGACAAATGGTACATCCTAGCCATCTCCAC CCTCGTCGCGAACCCCGACCCCGAACGCGCCGATCAACTCTATCTCTACC TAACCTCCAAACCCGAATACTCGACCCCCTCATCCCGGCAAGACCTCATC CGCCGCATCCGCGAAGCCCTCATCAAATCCGTGATCATAGTCGGGGTATG CAAACCCATCGAAGCCATTCTCGCCATCAGCAAGCTCGAGGCTCCCGAAG ACAAAGACTACACATTTACACGGGAGAACTGGCAATGCGACGAGGCGAAT CACGAGCGTGGCGTAGCGTGGTTGGAGAAGCTGTATGCGCGGAATACGTC CGGGACGTTGGATTTGTTTGCGGCGCATAAGGATTTCGCGTGGTTGTCGA AGGAGATCACGTATGGGTTGTTTTTGAGTGATCGGGGGGTGTTGGATGAT TTGGATACGCAGTTGGTGGTGTTGCCGGCGATTATGAGTCAGAATTTGAA GATTGAGACGCATTGGCATATTCGGGGGACGAGACGGTTGGGGGTGAGTT TGGAGGATGTGAGGGTTTTGTGTGAGGGGGTTAAGCATGTTGCTGGGTTT TATGGGAGGGTGTTGGATAAGGTGCCGAGTGTGGAGGAGGTCGAGGGGGA TGTTTGA
back to top

Coding sequence (CDS) from alignment at ch1:3308296..3309252-

>KJC3_001285-T1 ID=KJC3_001285-T1|Name=KJC3_001285-T1|organism=Aspergillus niger KJC3|type=CDS|length=957bp|location=Sequence derived from alignment at ch1:3308296..3309252- (Aspergillus niger KJC3)
ATGGCCCGCAACCCTTCGCGTCTGCTCCCTCCGTCTCGTAGTCTGCAATT
GACTACTAGTAAACGGCAATTCGGCACCGGTGCCTCCATCCTACCCCTCC
TCTCCCCGCCCCGATACAGGCCGCTCCGATCATCATTAATATCATCAACA
CCATCATCTTCCCCTCTCGCGCATCGCATTCCCACCTTCGCTACTCCCCT
CCGAACCATCACCACCAGCAGCAACAGCGCCCCCACCAAAATGACCACAA
CCATCGACCCCAAATACGCCCAACTCTTCCAATCCCTGGAATCCCAATTC
CAAACCACCACCCTCCCGCACGACAAATGGTACATCCTAGCCATCTCCAC
CCTCGTCGCGAACCCCGACCCCGAACGCGCCGATCAACTCTATCTCTACC
TAACCTCCAAACCCGAATACTCGACCCCCTCATCCCGGCAAGACCTCATC
CGCCGCATCCGCGAAGCCCTCATCAAATCCGTGATCATAGTCGGGGTATG
CAAACCCATCGAAGCCATTCTCGCCATCAGCAAGCTCGAGGCTCCCGAAG
ACAAAGACTACACATTTACACGGGAGAACTGGCAATGCGACGAGGCGAAT
CACGAGCGTGGCGTAGCGTGGTTGGAGAAGCTGTATGCGCGGAATACGTC
CGGGACGTTGGATTTGTTTGCGGCGCATAAGGATTTCGCGTGGTTGTCGA
AGGAGATCACGTATGGGTTGTTTTTGAGTGATCGGGGGGTGTTGGATGAT
TTGGATACGCAGTTGGTGGTGTTGCCGGCGATTATGAGTCAGAATTTGAA
GATTGAGACGCATTGGCATATTCGGGGGACGAGACGGTTGGGGGTGAGTT
TGGAGGATGTGAGGGTTTTGTGTGAGGGGGTTAAGCATGTTGCTGGGTTT
TATGGGAGGGTGTTGGATAAGGTGCCGAGTGTGGAGGAGGTCGAGGGGGA
TGTTTGA
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_001285KJC3_001285Aspergillus niger KJC3gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001285-T1.cdsKJC3_001285-T1.cdsAspergillus niger KJC3CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001285-T1.exon1KJC3_001285-T1.exon1Aspergillus niger KJC3exon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001285-T1KJC3_001285-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR029032
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch1supercontigch1:3308296..3309252 -