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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch1:3344743..3345952+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_001296-T1 ID=KJC3_001296-T1|Name=KJC3_001296-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1210bp|location=Sequence derived from alignment at ch1:3344743..3345952+ (Aspergillus niger KJC3)
ATGACCTATTGTGGAACTTCCCTAACAACAGTATGTTAAAACGACACTAT
TACTTGTACCCTGGGTTGGCGACTTGAAGGGACAAGAAAAGCAACGGAGC
ATCTCGTGTCATTCGCTCTTCATTCTACACGCTCAGAGTCCCACCCTCAC
TACTATTTACCTATTTCCATCCCATACAGAGGGAATTTAAATAAGTACTC
ACATTTATAATTGAACATCAATCCCAGAATATGGGTCCAACTTGCTGCAC
TAGCATATACTACGATAACTTTCAATAATCACGTGATTATATATTTTCGT
CCAGTGGAATTTCCTTTTTGAGTAGCTCCGCCTCTTCCAACCGCTCACTC
GTCTTGAAGTAACCACAATGCTTCGGAAAGTATGGTCTTCGTCATATCAA
TCTTCTGTATCATTCCAGATCCTCTCTGACCTCCATCTGGAGGTTAACCA
ACAATACTCATCTTATGAAATTCCCGCTTGCGCAGAGTATCTTATCCTCG
CGGGTGATGTCGGACGCTTAACGGACTATAATGATTACCGCAACTTTCTG
CAGAAACAGACAGACCGGTTTAGATCAGTGTTTCTTCTACTTGGGAACCA
TGAGTTCTTTAATGAGACGTTTGATACGGGAATAGAGATGGCAAAACAAC
TTGAAGAGGATCCTGCATTTGATGGACGGTTGATTGTCCTCCATCAGAAA
CGATACGATGTTCCAGGTTCTAATGTTAGTATACTTGGGTGCACGCTTTG
GTCAAAAGTACCCCAGGAATCGGTCGAAGTTGTCCAGTCAAAAGTGAAAG
ATTTCCAAAGAATTTCAGACTGGTCGGTTGATGACCATAATGCACGCCAT
GATTCTGATTATTCCTGGTTGACGAAGGAGATACATTCGATACATGAGGA
GAATAGAACAGTGGCTAAAGACAGTAAACGACGGTCTATTCTCGTTGTAA
CACACCATGCGCCCTCGCTTCAGGGGACATCAAATCCTAAACACGCTCAG
AGTCCTTGGAGTGTTGCCTTTGGAACTAATATCCTGTCAGAGGTTCCGGA
CGGTGTGAAATTCTGGGTGTTTGGGCACACTCATTATAATACAGATTTCA
AGGAGAAGGGGGTACGAGTTGTGAGCAATCAACGGGGGTATGTGTTGCCT
GGGAGTGATCCGAAAGCAGACAGCGGGTTTGATGTGAGGAAGGTCATACA
GCTATCATAA back to topCoding sequence (CDS) from alignment at ch1:3344743..3345952+ >KJC3_001296-T1 ID=KJC3_001296-T1|Name=KJC3_001296-T1|organism=Aspergillus niger KJC3|type=CDS|length=1830bp|location=Sequence derived from alignment at ch1:3344743..3345952+ (Aspergillus niger KJC3)
ATGACCTATTGTGGAACTTCCCTAACAACACTCCGCCTCTTCCAACCGCT
CACTCGTCTTGAAGTAACCACAATGCTTCGGAAAGTATGGTCTTCGTCAT
ATCAATCTTCTGTATCATTCCAGATCCTCTCTGACCTCCATCTGGAGGTT
AACCAACAATACTCATCTTATGAAATTCCCGCTTGCGCAGAGTATCTTAT
CCTCGCGGGTGATGTCGGACGCTTAACGGACTATAATGATTACCGCAACT
TTCTGCAGAAACAGACAGACCGGTTTAGATCAGTGTTTCTTCTACTTGGG
AACCATGAGTTCTTTAATGAGACGTTTGATACGGGAATAGAGATGGCAAA
ACAACTTGAAGAGGATCCTGCATTTGATGGACGGTTGATTGTCCTCCATC
AGAAACGATACGATGTTCCAGGTTCTAATGTTAGTATACTTGGGTGCACG
CTTTGGTCAAAAGTACCCCAGGAATCGGTCGAAGTTGTCCAGTCAAAAGT
GAAAGATTTCCAAAGAATTTCAGACTGGTCGGTTGATGACCATAATGCAC
GCCATGATTCTGATTATTCCTGGTTGACGAAGGAGATACATTCGATACAT
GAGGAGAATAGAACAGTGGCTAAAGACAGTAAACGACGGTCTATTCTCGT
TGTAACACACCATGCGCCCTCGCTTCAGGGGACATCAAATCCTAAACACG
CTCAGAGTCCTTGGAGTGTTGCCTTTGGAACTAATATCCTGTCAGAGGTT
CCGGACGGTGTGAAATTCTGGGTGTTTGGGCACACTCATTATAATACAGA
TTTCAAGGAGAAGGGGGTACGAGTTGTGAGCAATCAACGGGGGTATGTGT
TGCCTGGGAGTGATCCGAAAGCAGACAGCGGGTTTGATGTGAGGAAGGTC
ATACAGCTATCATAAATGACCTATTGTGGAACTTCCCTAACAACACTCCG
CCTCTTCCAACCGCTCACTCGTCTTGAAGTAACCACAATGCTTCGGAAAG
TATGGTCTTCGTCATATCAATCTTCTGTATCATTCCAGATCCTCTCTGAC
CTCCATCTGGAGGTTAACCAACAATACTCATCTTATGAAATTCCCGCTTG
CGCAGAGTATCTTATCCTCGCGGGTGATGTCGGACGCTTAACGGACTATA
ATGATTACCGCAACTTTCTGCAGAAACAGACAGACCGGTTTAGATCAGTG
TTTCTTCTACTTGGGAACCATGAGTTCTTTAATGAGACGTTTGATACGGG
AATAGAGATGGCAAAACAACTTGAAGAGGATCCTGCATTTGATGGACGGT
TGATTGTCCTCCATCAGAAACGATACGATGTTCCAGGTTCTAATGTTAGT
ATACTTGGGTGCACGCTTTGGTCAAAAGTACCCCAGGAATCGGTCGAAGT
TGTCCAGTCAAAAGTGAAAGATTTCCAAAGAATTTCAGACTGGTCGGTTG
ATGACCATAATGCACGCCATGATTCTGATTATTCCTGGTTGACGAAGGAG
ATACATTCGATACATGAGGAGAATAGAACAGTGGCTAAAGACAGTAAACG
ACGGTCTATTCTCGTTGTAACACACCATGCGCCCTCGCTTCAGGGGACAT
CAAATCCTAAACACGCTCAGAGTCCTTGGAGTGTTGCCTTTGGAACTAAT
ATCCTGTCAGAGGTTCCGGACGGTGTGAAATTCTGGGTGTTTGGGCACAC
TCATTATAATACAGATTTCAAGGAGAAGGGGGTACGAGTTGTGAGCAATC
AACGGGGGTATGTGTTGCCTGGGAGTGATCCGAAAGCAGACAGCGGGTTT
GATGTGAGGAAGGTCATACAGCTATCATAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0016787 | hydrolase activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR029052 |
| DBxref | InterPro:IPR004843 |
| DBxref | PFAM:PF00149 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch1 | supercontig | ch1:3344743..3345952 + |
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