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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch1:3353567..3355914- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_001301-T1 ID=KJC3_001301-T1|Name=KJC3_001301-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2348bp|location=Sequence derived from alignment at ch1:3353567..3355914- (Aspergillus niger KJC3)
ATCTCATTAAGCCAGGGTTAACCAACATGGAGGACTCTGTCGCAGAGCTC
AATGAGCTCTTTGCTGCCGCTGCTCCGGATGGGCTACCCAAGGATGTCCT
CACGGAGTTGCAGTCAATCCTGCGCATCCACTCCATCTCCGCGCAAGAGC
TCTTCTACAAATGGGAGTCCTACTGTCTGAAAATGGGCCCGGATGAGCTG
AAGATGGACCTGGGAACCGTACGACTGTTCAAGAAAGATGTGCAGGATAC
ATTGGAGCGAGAAGCCCGCGGCAAAGCAGGCAGACAGATGGAGAGGAAAC
CAGCAGTGCCGGCGACCCCGCGCGCTGCTACGTCGGATGTTTTTGGCATG
TACGTTGAGTATCAATGGATTGATGGACGAAAACTAATGATCCAGGCTTG
ACGGATTAACACCAGGTGCTTCTGGTCGGAGCAATGCCGGTTCAGCTAAG
CGGAAATCCGACTTTGCTTCGCCATCAATCTCAAAGATCGGGAGAACCGA
CCACAATGGGTCTCCGATGAGTACTAATGTGAAGCAGACAAACGGTGATG
GACTACAGTACGTGCGACAATCACCTTGGAAGATTGCAACTGACCAAACA
GATCCATTCCATTCTCCCAGCGCCAGAATGCAGGCGAAACGATCGAAACC
ATCAACTCTCATCTCCCACAAGCAGAGGCTCCTATCGCGCCATACTCCGA
AGCCCGCATACGACCGACGGCAAACACAGACCTGAAGAAGTTCGGATACA
AGCCCATGGCCATGCGACTGGCCGAAGCATCGGAGATCCTGGACGACCGC
ATTGATGAATTCATGGCATTGTTTGAGAAACAGTACGGCAGCGACGAGAT
CACATTCGGCAGCGCCGCCACTCAGAGCACCAGCGAGATCGTGGCCGTCG
GCCGCATCGCATCCGATAGTATGGAAGGGAAGCTCAACGCGGCATCACTC
GTGCTCGAGACATCAAGACGCACAGGAGCAGGCATCCGGGTTCCATTGAA
ACTCGAATCCGTGCCCTCAGCCAACTTCTTCCCGGGCCAGATCGTGGCGC
TGCGCGGCATTAATGCGTCCGGTAACTACTTTTCCGTCAAAGAGGTCCTC
CCCACCCCCCTTCTCCCCCCGGCCGCCTCATCAGTCGTCAACCTCGAAAC
CATCAACCAGAGACTCGAAGACGCCGGACCAGCGCCCTTGAACATCCTCG
TCGCAGCCGGCCCGTACACAGCAGATGATAATCTCGACTACGAGCCACTG
AAAGAAATTTGCCGCAAGGCAGCAGACAGCTACGCGGACGGTCTCGTCCT
GCTGGGACCGTTCCTGGACATCGAGCATCCCCTGCTGGCCTCGGGGGATT
TCGACCTGCCGGAGATCAACGGCGTGGACCCGGACACGGTGACGCTGACG
ACGGTATTCCGGCACTGCATCTCAGCTCCGCTACAGCGACTCGTGGCGGC
CGTGCCCAGCGTCACAATCGTGCTGGTCCCGTCAGTGCGCGACGCAGTCA
GCAAACACGTCTCATGGCCGCAGGAGCAGCTACCCAAGAAGGAGCTGGGA
CTGCCGAAGCAGGTGCGCATGGTGTCGAACCCGGTGACGCTGTCGCTGAA
CGAGACGGTGATTGGGATGTGCTCGCACGATGTGCTGTACGAGCTGCGGC
GCGAGGAGGTACTTCACGGCAAGCCGACGGAGGGAAACCTCCTGACGAGA
CTGCCAAAGTACATGATCGAGCAGCGACACTTCCAGCCAATGTTCCCGAC
ATCAAGCAGAGATATGCTGCCACGAGCGGGGACCGGCCTTGCAACAGGGG
GGATGGTAGATGTGAGCTATTCGAAGCTGGGCGAGTGGTGGAATGTACGG
CCGGACGTGTTGATAACGCCGAGTATGCTGCCGCCGTTTGTCAAGGTAAC
CACCACACTCAGTGATCTGTACTCTGTATGATGAATGCTAACAACTACAC
AGGTAGTAGACAGCGTAACGGTGATCAACCCCGGCACACTCTCCAAGCGC
CGCGGCGCAGGCACATACGCACAGATGGCGATCCAGCCACGACGGATAGA
AGACGAAGAGAGAGAACAGAAGCAGGTCAGCCATAAATTGTATGAACGGG
CCCGGGTAGACATAATACGGATATAGCGCAGCAGCAGTATACATGATAAT
GATGATTCCACGAAAGGACTCCATACCCATCCATATCCACATAAGCATAA
AGCATAAACGCAGGGTATAATAGCCTAGCCTAGCCTAGCCAAGCCATAAA
AATCACCACAACGCCATCTTTCCCTTTCATCCCCAACCCTAGAAAAACAT
TTGAAATAGATCGAAATCACCTCAAACAAACCACCCTCCTCCTCCCAC back to topCoding sequence (CDS) from alignment at ch1:3353567..3355914- >KJC3_001301-T1 ID=KJC3_001301-T1|Name=KJC3_001301-T1|organism=Aspergillus niger KJC3|type=CDS|length=7812bp|location=Sequence derived from alignment at ch1:3353567..3355914- (Aspergillus niger KJC3)
GTAGTAGACAGCGTAACGGTGATCAACCCCGGCACACTCTCCAAGCGCCG
CGGCGCAGGCACATACGCACAGATGGCGATCCAGCCACGACGGATAGAAG
ACGAAGAGAGAGAACAGAAGCAGGTCAGCCATAAATTGTATGAACGGGCC
CGGGTAGACATAATACGGATATAGATCCATTCCATTCTCCCAGCGCCAGA
ATGCAGGCGAAACGATCGAAACCATCAACTCTCATCTCCCACAAGCAGAG
GCTCCTATCGCGCCATACTCCGAAGCCCGCATACGACCGACGGCAAACAC
AGACCTGAAGAAGTTCGGATACAAGCCCATGGCCATGCGACTGGCCGAAG
CATCGGAGATCCTGGACGACCGCATTGATGAATTCATGGCATTGTTTGAG
AAACAGTACGGCAGCGACGAGATCACATTCGGCAGCGCCGCCACTCAGAG
CACCAGCGAGATCGTGGCCGTCGGCCGCATCGCATCCGATAGTATGGAAG
GGAAGCTCAACGCGGCATCACTCGTGCTCGAGACATCAAGACGCACAGGA
GCAGGCATCCGGGTTCCATTGAAACTCGAATCCGTGCCCTCAGCCAACTT
CTTCCCGGGCCAGATCGTGGCGCTGCGCGGCATTAATGCGTCCGGTAACT
ACTTTTCCGTCAAAGAGGTCCTCCCCACCCCCCTTCTCCCCCCGGCCGCC
TCATCAGTCGTCAACCTCGAAACCATCAACCAGAGACTCGAAGACGCCGG
ACCAGCGCCCTTGAACATCCTCGTCGCAGCCGGCCCGTACACAGCAGATG
ATAATCTCGACTACGAGCCACTGAAAGAAATTTGCCGCAAGGCAGCAGAC
AGCTACGCGGACGGTCTCGTCCTGCTGGGACCGTTCCTGGACATCGAGCA
TCCCCTGCTGGCCTCGGGGGATTTCGACCTGCCGGAGATCAACGGCGTGG
ACCCGGACACGGTGACGCTGACGACGGTATTCCGGCACTGCATCTCAGCT
CCGCTACAGCGACTCGTGGCGGCCGTGCCCAGCGTCACAATCGTGCTGGT
CCCGTCAGTGCGCGACGCAGTCAGCAAACACGTCTCATGGCCGCAGGAGC
AGCTACCCAAGAAGGAGCTGGGACTGCCGAAGCAGGTGCGCATGGTGTCG
AACCCGGTGACGCTGTCGCTGAACGAGACGGTGATTGGGATGTGCTCGCA
CGATGTGCTGTACGAGCTGCGGCGCGAGGAGGTACTTCACGGCAAGCCGA
CGGAGGGAAACCTCCTGACGAGACTGCCAAAGTACATGATCGAGCAGCGA
CACTTCCAGCCAATGTTCCCGACATCAAGCAGAGATATGCTGCCACGAGC
GGGGACCGGCCTTGCAACAGGGGGGATGGTAGATGTGAGCTATTCGAAGC
TGGGCGAGTGGTGGAATGTACGGCCGGACGTGTTGATAACGCCGAGTATG
CTGCCGCCGTTTGTCAAGGCTTGACGGATTAACACCAGGTGCTTCTGGTC
GGAGCAATGCCGGTTCAGCTAAGCGGAAATCCGACTTTGCTTCGCCATCA
ATCTCAAAGATCGGGAGAACCGACCACAATGGGTCTCCGATGAGTACTAA
TGTGAAGCAGACAAACGGTGATGGACTACAATGGAGGACTCTGTCGCAGA
GCTCAATGAGCTCTTTGCTGCCGCTGCTCCGGATGGGCTACCCAAGGATG
TCCTCACGGAGTTGCAGTCAATCCTGCGCATCCACTCCATCTCCGCGCAA
GAGCTCTTCTACAAATGGGAGTCCTACTGTCTGAAAATGGGCCCGGATGA
GCTGAAGATGGACCTGGGAACCGTACGACTGTTCAAGAAAGATGTGCAGG
ATACATTGGAGCGAGAAGCCCGCGGCAAAGCAGGCAGACAGATGGAGAGG
AAACCAGCAGTGCCGGCGACCCCGCGCGCTGCTACGTCGGATGTTTTTGG
CATGTAGTAGACAGCGTAACGGTGATCAACCCCGGCACACTCTCCAAGCG
CCGCGGCGCAGGCACATACGCACAGATGGCGATCCAGCCACGACGGATAG
AAGACGAAGAGAGAGAACAGAAGCAGGTCAGCCATAAATTGTATGAACGG
GCCCGGGTAGACATAATACGGATATAGATCCATTCCATTCTCCCAGCGCC
AGAATGCAGGCGAAACGATCGAAACCATCAACTCTCATCTCCCACAAGCA
GAGGCTCCTATCGCGCCATACTCCGAAGCCCGCATACGACCGACGGCAAA
CACAGACCTGAAGAAGTTCGGATACAAGCCCATGGCCATGCGACTGGCCG
AAGCATCGGAGATCCTGGACGACCGCATTGATGAATTCATGGCATTGTTT
GAGAAACAGTACGGCAGCGACGAGATCACATTCGGCAGCGCCGCCACTCA
GAGCACCAGCGAGATCGTGGCCGTCGGCCGCATCGCATCCGATAGTATGG
AAGGGAAGCTCAACGCGGCATCACTCGTGCTCGAGACATCAAGACGCACA
GGAGCAGGCATCCGGGTTCCATTGAAACTCGAATCCGTGCCCTCAGCCAA
CTTCTTCCCGGGCCAGATCGTGGCGCTGCGCGGCATTAATGCGTCCGGTA
ACTACTTTTCCGTCAAAGAGGTCCTCCCCACCCCCCTTCTCCCCCCGGCC
GCCTCATCAGTCGTCAACCTCGAAACCATCAACCAGAGACTCGAAGACGC
CGGACCAGCGCCCTTGAACATCCTCGTCGCAGCCGGCCCGTACACAGCAG
ATGATAATCTCGACTACGAGCCACTGAAAGAAATTTGCCGCAAGGCAGCA
GACAGCTACGCGGACGGTCTCGTCCTGCTGGGACCGTTCCTGGACATCGA
GCATCCCCTGCTGGCCTCGGGGGATTTCGACCTGCCGGAGATCAACGGCG
TGGACCCGGACACGGTGACGCTGACGACGGTATTCCGGCACTGCATCTCA
GCTCCGCTACAGCGACTCGTGGCGGCCGTGCCCAGCGTCACAATCGTGCT
GGTCCCGTCAGTGCGCGACGCAGTCAGCAAACACGTCTCATGGCCGCAGG
AGCAGCTACCCAAGAAGGAGCTGGGACTGCCGAAGCAGGTGCGCATGGTG
TCGAACCCGGTGACGCTGTCGCTGAACGAGACGGTGATTGGGATGTGCTC
GCACGATGTGCTGTACGAGCTGCGGCGCGAGGAGGTACTTCACGGCAAGC
CGACGGAGGGAAACCTCCTGACGAGACTGCCAAAGTACATGATCGAGCAG
CGACACTTCCAGCCAATGTTCCCGACATCAAGCAGAGATATGCTGCCACG
AGCGGGGACCGGCCTTGCAACAGGGGGGATGGTAGATGTGAGCTATTCGA
AGCTGGGCGAGTGGTGGAATGTACGGCCGGACGTGTTGATAACGCCGAGT
ATGCTGCCGCCGTTTGTCAAGGCTTGACGGATTAACACCAGGTGCTTCTG
GTCGGAGCAATGCCGGTTCAGCTAAGCGGAAATCCGACTTTGCTTCGCCA
TCAATCTCAAAGATCGGGAGAACCGACCACAATGGGTCTCCGATGAGTAC
TAATGTGAAGCAGACAAACGGTGATGGACTACAATGGAGGACTCTGTCGC
AGAGCTCAATGAGCTCTTTGCTGCCGCTGCTCCGGATGGGCTACCCAAGG
ATGTCCTCACGGAGTTGCAGTCAATCCTGCGCATCCACTCCATCTCCGCG
CAAGAGCTCTTCTACAAATGGGAGTCCTACTGTCTGAAAATGGGCCCGGA
TGAGCTGAAGATGGACCTGGGAACCGTACGACTGTTCAAGAAAGATGTGC
AGGATACATTGGAGCGAGAAGCCCGCGGCAAAGCAGGCAGACAGATGGAG
AGGAAACCAGCAGTGCCGGCGACCCCGCGCGCTGCTACGTCGGATGTTTT
TGGCATGTAGTAGACAGCGTAACGGTGATCAACCCCGGCACACTCTCCAA
GCGCCGCGGCGCAGGCACATACGCACAGATGGCGATCCAGCCACGACGGA
TAGAAGACGAAGAGAGAGAACAGAAGCAGGTCAGCCATAAATTGTATGAA
CGGGCCCGGGTAGACATAATACGGATATAGATCCATTCCATTCTCCCAGC
GCCAGAATGCAGGCGAAACGATCGAAACCATCAACTCTCATCTCCCACAA
GCAGAGGCTCCTATCGCGCCATACTCCGAAGCCCGCATACGACCGACGGC
AAACACAGACCTGAAGAAGTTCGGATACAAGCCCATGGCCATGCGACTGG
CCGAAGCATCGGAGATCCTGGACGACCGCATTGATGAATTCATGGCATTG
TTTGAGAAACAGTACGGCAGCGACGAGATCACATTCGGCAGCGCCGCCAC
TCAGAGCACCAGCGAGATCGTGGCCGTCGGCCGCATCGCATCCGATAGTA
TGGAAGGGAAGCTCAACGCGGCATCACTCGTGCTCGAGACATCAAGACGC
ACAGGAGCAGGCATCCGGGTTCCATTGAAACTCGAATCCGTGCCCTCAGC
CAACTTCTTCCCGGGCCAGATCGTGGCGCTGCGCGGCATTAATGCGTCCG
GTAACTACTTTTCCGTCAAAGAGGTCCTCCCCACCCCCCTTCTCCCCCCG
GCCGCCTCATCAGTCGTCAACCTCGAAACCATCAACCAGAGACTCGAAGA
CGCCGGACCAGCGCCCTTGAACATCCTCGTCGCAGCCGGCCCGTACACAG
CAGATGATAATCTCGACTACGAGCCACTGAAAGAAATTTGCCGCAAGGCA
GCAGACAGCTACGCGGACGGTCTCGTCCTGCTGGGACCGTTCCTGGACAT
CGAGCATCCCCTGCTGGCCTCGGGGGATTTCGACCTGCCGGAGATCAACG
GCGTGGACCCGGACACGGTGACGCTGACGACGGTATTCCGGCACTGCATC
TCAGCTCCGCTACAGCGACTCGTGGCGGCCGTGCCCAGCGTCACAATCGT
GCTGGTCCCGTCAGTGCGCGACGCAGTCAGCAAACACGTCTCATGGCCGC
AGGAGCAGCTACCCAAGAAGGAGCTGGGACTGCCGAAGCAGGTGCGCATG
GTGTCGAACCCGGTGACGCTGTCGCTGAACGAGACGGTGATTGGGATGTG
CTCGCACGATGTGCTGTACGAGCTGCGGCGCGAGGAGGTACTTCACGGCA
AGCCGACGGAGGGAAACCTCCTGACGAGACTGCCAAAGTACATGATCGAG
CAGCGACACTTCCAGCCAATGTTCCCGACATCAAGCAGAGATATGCTGCC
ACGAGCGGGGACCGGCCTTGCAACAGGGGGGATGGTAGATGTGAGCTATT
CGAAGCTGGGCGAGTGGTGGAATGTACGGCCGGACGTGTTGATAACGCCG
AGTATGCTGCCGCCGTTTGTCAAGGCTTGACGGATTAACACCAGGTGCTT
CTGGTCGGAGCAATGCCGGTTCAGCTAAGCGGAAATCCGACTTTGCTTCG
CCATCAATCTCAAAGATCGGGAGAACCGACCACAATGGGTCTCCGATGAG
TACTAATGTGAAGCAGACAAACGGTGATGGACTACAATGGAGGACTCTGT
CGCAGAGCTCAATGAGCTCTTTGCTGCCGCTGCTCCGGATGGGCTACCCA
AGGATGTCCTCACGGAGTTGCAGTCAATCCTGCGCATCCACTCCATCTCC
GCGCAAGAGCTCTTCTACAAATGGGAGTCCTACTGTCTGAAAATGGGCCC
GGATGAGCTGAAGATGGACCTGGGAACCGTACGACTGTTCAAGAAAGATG
TGCAGGATACATTGGAGCGAGAAGCCCGCGGCAAAGCAGGCAGACAGATG
GAGAGGAAACCAGCAGTGCCGGCGACCCCGCGCGCTGCTACGTCGGATGT
TTTTGGCATGTAGTAGACAGCGTAACGGTGATCAACCCCGGCACACTCTC
CAAGCGCCGCGGCGCAGGCACATACGCACAGATGGCGATCCAGCCACGAC
GGATAGAAGACGAAGAGAGAGAACAGAAGCAGGTCAGCCATAAATTGTAT
GAACGGGCCCGGGTAGACATAATACGGATATAGATCCATTCCATTCTCCC
AGCGCCAGAATGCAGGCGAAACGATCGAAACCATCAACTCTCATCTCCCA
CAAGCAGAGGCTCCTATCGCGCCATACTCCGAAGCCCGCATACGACCGAC
GGCAAACACAGACCTGAAGAAGTTCGGATACAAGCCCATGGCCATGCGAC
TGGCCGAAGCATCGGAGATCCTGGACGACCGCATTGATGAATTCATGGCA
TTGTTTGAGAAACAGTACGGCAGCGACGAGATCACATTCGGCAGCGCCGC
CACTCAGAGCACCAGCGAGATCGTGGCCGTCGGCCGCATCGCATCCGATA
GTATGGAAGGGAAGCTCAACGCGGCATCACTCGTGCTCGAGACATCAAGA
CGCACAGGAGCAGGCATCCGGGTTCCATTGAAACTCGAATCCGTGCCCTC
AGCCAACTTCTTCCCGGGCCAGATCGTGGCGCTGCGCGGCATTAATGCGT
CCGGTAACTACTTTTCCGTCAAAGAGGTCCTCCCCACCCCCCTTCTCCCC
CCGGCCGCCTCATCAGTCGTCAACCTCGAAACCATCAACCAGAGACTCGA
AGACGCCGGACCAGCGCCCTTGAACATCCTCGTCGCAGCCGGCCCGTACA
CAGCAGATGATAATCTCGACTACGAGCCACTGAAAGAAATTTGCCGCAAG
GCAGCAGACAGCTACGCGGACGGTCTCGTCCTGCTGGGACCGTTCCTGGA
CATCGAGCATCCCCTGCTGGCCTCGGGGGATTTCGACCTGCCGGAGATCA
ACGGCGTGGACCCGGACACGGTGACGCTGACGACGGTATTCCGGCACTGC
ATCTCAGCTCCGCTACAGCGACTCGTGGCGGCCGTGCCCAGCGTCACAAT
CGTGCTGGTCCCGTCAGTGCGCGACGCAGTCAGCAAACACGTCTCATGGC
CGCAGGAGCAGCTACCCAAGAAGGAGCTGGGACTGCCGAAGCAGGTGCGC
ATGGTGTCGAACCCGGTGACGCTGTCGCTGAACGAGACGGTGATTGGGAT
GTGCTCGCACGATGTGCTGTACGAGCTGCGGCGCGAGGAGGTACTTCACG
GCAAGCCGACGGAGGGAAACCTCCTGACGAGACTGCCAAAGTACATGATC
GAGCAGCGACACTTCCAGCCAATGTTCCCGACATCAAGCAGAGATATGCT
GCCACGAGCGGGGACCGGCCTTGCAACAGGGGGGATGGTAGATGTGAGCT
ATTCGAAGCTGGGCGAGTGGTGGAATGTACGGCCGGACGTGTTGATAACG
CCGAGTATGCTGCCGCCGTTTGTCAAGGCTTGACGGATTAACACCAGGTG
CTTCTGGTCGGAGCAATGCCGGTTCAGCTAAGCGGAAATCCGACTTTGCT
TCGCCATCAATCTCAAAGATCGGGAGAACCGACCACAATGGGTCTCCGAT
GAGTACTAATGTGAAGCAGACAAACGGTGATGGACTACAATGGAGGACTC
TGTCGCAGAGCTCAATGAGCTCTTTGCTGCCGCTGCTCCGGATGGGCTAC
CCAAGGATGTCCTCACGGAGTTGCAGTCAATCCTGCGCATCCACTCCATC
TCCGCGCAAGAGCTCTTCTACAAATGGGAGTCCTACTGTCTGAAAATGGG
CCCGGATGAGCTGAAGATGGACCTGGGAACCGTACGACTGTTCAAGAAAG
ATGTGCAGGATACATTGGAGCGAGAAGCCCGCGGCAAAGCAGGCAGACAG
ATGGAGAGGAAACCAGCAGTGCCGGCGACCCCGCGCGCTGCTACGTCGGA
TGTTTTTGGCAT back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003677 | DNA binding |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006260 | DNA replication |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_001301-T1.utr3p1 | KJC3_001301-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_001301-T1.utr5p1 | KJC3_001301-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG09261V87 |
| DBxref | InterPro:IPR013627 |
| DBxref | InterPro:IPR016722 |
| DBxref | InterPro:IPR007185 |
| DBxref | PFAM:PF08418 |
| DBxref | PFAM:PF04042 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch1 | supercontig | ch1:3353567..3355914 - |
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