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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch1:3367703..3368728+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_001306-T1 ID=KJC3_001306-T1|Name=KJC3_001306-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1026bp|location=Sequence derived from alignment at ch1:3367703..3368728+ (Aspergillus niger KJC3)
ATGGCGGATCAGGCCTCTTTCGGCCGGCCGGTTGTTCCTGGCGAGACTGT
GGTGTCCAACGAAGCGGTTATGCCTGGCCCCGTCAGCGCGGCTCCTTCTC
AGTTCACCATCGCTAATTCCTACATGACGACCGACATTCTTTCCATGTCT
TATCAAGGCGGGGAAGAACAGACTCTATTTGCATTTAGCCCCGTGTCTCC
TTCGCTGCAGGGCTGGTCGGCGAAGAATGACCCGCAGGTTTTCACCAATC
CGGGTCTAGAGCGAGGCTTGAAGAACTCGCATGTGCGCAACGGTCAGCCC
ACGCCCCCACCATTCGACGACAAGAGTGTCAATGGGGTCGACGAAGTCTA
TTCCTTGTCTCAATACCACCAGCCGTATGACGGGGCTGCCTATGCCAACC
CCACCCCCCGTGCGAGCTTCAGTCAGCCGGCCGTTTCGGACGCGCCTCAA
CCAGCGCCCAAGCGTCGCAAGACTAATGGCACACTCGATTCGTCTTCACC
CGACTCCGGTGACAAGCTGAGCGAAAAAGCGAAGCGGGAGAAATTCCTGG
AGCGCAATCGACTGGCAGCGAGCAAGTGTCGCCTGAAGAAGAAGAAGCAG
ACGGAGACTCTCCGAGATCAATTCAAATTACTCTCCGAGAGGAAGGATTA
TCTGACTCGTTATATTGACGCCCTGCGTAGTGAGATCCTCCTGTACAAGA
ACTACTTACTAGAGCACGCCCAGTGCAATGATGAGGCCATTTCGATGCAC
CTCAGCACAATGGTGAAAAACATCACCCAGCAGGACTCACTGGGGGCGTC
CGACCTGAAAACGGACCTAAATGCTCTGACCCCTTCGAGCTCCAGTCGGA
CAACCCGCTCGCAGGACCTTTCCTTTGGCTTTGATAGCCCCATCCAGATG
CCCTCAAAGATGGGCTCCCTGGAACCCACTCCTCGCCGGGACTCAGAGCA
GACCCTGGCGAGTGACGCGTCCTTCTCCTTCTCGACTCCCAACAATGACG
CCTTTGAGGATTTGCTCGATGTCTAG back to topCoding sequence (CDS) from alignment at ch1:3367703..3368728+ >KJC3_001306-T1 ID=KJC3_001306-T1|Name=KJC3_001306-T1|organism=Aspergillus niger KJC3|type=CDS|length=1026bp|location=Sequence derived from alignment at ch1:3367703..3368728+ (Aspergillus niger KJC3)
ATGGCGGATCAGGCCTCTTTCGGCCGGCCGGTTGTTCCTGGCGAGACTGT
GGTGTCCAACGAAGCGGTTATGCCTGGCCCCGTCAGCGCGGCTCCTTCTC
AGTTCACCATCGCTAATTCCTACATGACGACCGACATTCTTTCCATGTCT
TATCAAGGCGGGGAAGAACAGACTCTATTTGCATTTAGCCCCGTGTCTCC
TTCGCTGCAGGGCTGGTCGGCGAAGAATGACCCGCAGGTTTTCACCAATC
CGGGTCTAGAGCGAGGCTTGAAGAACTCGCATGTGCGCAACGGTCAGCCC
ACGCCCCCACCATTCGACGACAAGAGTGTCAATGGGGTCGACGAAGTCTA
TTCCTTGTCTCAATACCACCAGCCGTATGACGGGGCTGCCTATGCCAACC
CCACCCCCCGTGCGAGCTTCAGTCAGCCGGCCGTTTCGGACGCGCCTCAA
CCAGCGCCCAAGCGTCGCAAGACTAATGGCACACTCGATTCGTCTTCACC
CGACTCCGGTGACAAGCTGAGCGAAAAAGCGAAGCGGGAGAAATTCCTGG
AGCGCAATCGACTGGCAGCGAGCAAGTGTCGCCTGAAGAAGAAGAAGCAG
ACGGAGACTCTCCGAGATCAATTCAAATTACTCTCCGAGAGGAAGGATTA
TCTGACTCGTTATATTGACGCCCTGCGTAGTGAGATCCTCCTGTACAAGA
ACTACTTACTAGAGCACGCCCAGTGCAATGATGAGGCCATTTCGATGCAC
CTCAGCACAATGGTGAAAAACATCACCCAGCAGGACTCACTGGGGGCGTC
CGACCTGAAAACGGACCTAAATGCTCTGACCCCTTCGAGCTCCAGTCGGA
CAACCCGCTCGCAGGACCTTTCCTTTGGCTTTGATAGCCCCATCCAGATG
CCCTCAAAGATGGGCTCCCTGGAACCCACTCCTCGCCGGGACTCAGAGCA
GACCCTGGCGAGTGACGCGTCCTTCTCCTTCTCGACTCCCAACAATGACG
CCTTTGAGGATTTGCTCGATGTCTAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006355 | regulation of transcription, DNA-templated |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003700 | DNA-binding transcription factor activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR004827 |
| DBxref | PFAM:PF00170 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch1 | supercontig | ch1:3367703..3368728 + |
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