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KJC3_001307-T1, KJC3_001307-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_001307-T1
Unique NameKJC3_001307-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch1:3369576..3371281-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_001307-T1 ID=KJC3_001307-T1|Name=KJC3_001307-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1706bp|location=Sequence derived from alignment at ch1:3369576..3371281- (Aspergillus niger KJC3)
ATGAGGCCCTACTCCGAACTCCCCCAGGATGCTGATCTCCACGATCCCAG
CCATCATGATCCACCGCCGTCCGGCAGCCAGAGCGCCTTTCGCCTTTACT
GGCTCACGGCAATCGTCTGCTGCGGTGGCCTTCTTTTCGGCTATGACTCG
GGTGTGATTGGTATGTAGTCTCCTGAAGACTCACCGCACGCCATGCTCAT
CAATCAAATCCAGGCGGAGTTCTCACCTTCGACTCCTTTCATCGCTCCTT
TCGGTATACCGCCGCCGATGAGACACGAGTTAGTGCTATCGCAGTAGGCG
TCCAGCAAGCCTCTGCGCTGCTTGGTTGCCTGATTATCTGGCCTTTCACA
AACCGCCTTGGTCGTCGCCCGGCCATGGCTGTCTGCTCCCTCATCTTCTG
TACGGGGGTCATCTTCGAGCTCCTCGATACCCACTCGCTATCCGTCTTCT
ACGTGGGCCGCGTCATCTGCGGACTGGGGATCGGCGGCTCCGCAACCGTC
ATCCCCATCTATCTTTCGGAAATGAGTCCCACCGACAAGCGCGCCCGGCT
CGGAAGCTGCTATCAGTTCGCCTTCACTATCGGCATCCTCGTCTCCTATT
GGATCGACTATGGCATGCAGTTCGCTCCCGCCAATGCCCTGCAATGGCAG
ATTCCGTTCGCCGTACAGCTGATCCCCGGCGCATTCATGGGGTTGGGGAT
GCTCACGCTCCGCGAAAGCGTGCGCTGGCTTCTCTCACACGACCACGACA
AGAACGAGTCCAAAGCATGGGACAGCCTAACCTGGATCCGCTCATCGAAC
GGGCCACACGTGCGCGCCGAGTACCAGCAAATGAAATCCAGCATCGAGCG
TGACGCGCACGCAACGGCCGATTTCTCTCCGAGAGAGCTCCTCAGCAAGT
CCAACAGCCACCGACTCGCTCTAGCCGTTTGCCTGTTCATAGCCCAACAA
TCCATGGGGCCAACCGCGCTGGCCTACTTCGGGCCGCAATTCTTTGCACT
TCTCGTAGGCAACAACGCCCACCTGACCCTCCTCCTAACCGGCATCTTCG
GCGGCCTGAAAGTAATCGGCTGTCTCATCTTCATCGTATGGGTCGCCGAC
CGATTCGGCCGCCGACCACTACTGATCCTGGGCGCGCTCGCTATGTCCAT
TTGCATGATAACCACCTCAGTGGTAGTAAAATCCACCAACGTCCCCACAC
CCCACCCATCCACACATAACTCCGACACCACCCCCACCATCACCAACAGC
GGCCTCCTAACCGTCTCCCTCATCTACCTCGCCATCGTCTTCTACAACCT
CTCCTGGGGCCCCCTCCCCTGGCCCTGCACCGCCGAACTCTTCAACACGC
GCATCCGCGAACCCGGCGTCGCCATCGCCGTGGCCGCCCAATGGCTCTCC
AACTTCGTCTGGTCATTCTCGACCCCGTACGTCCTAGCAGGTGCCAAATG
GGCCACCTTTCTAATCTTCGGGATTTTAGACGCCAGCTTCGCTGCTTTCG
TCTGGTTCTTCTTACCTGAAACGCGCGGCCGAACCCTCGAGGAGATCGAT
GCGCTTTTCAAAGACGAGGATAAGCTCCACGATGACTCACTATCGTCCGC
CCTGCTGGTCGGGGAGCAGGAAATTGACCGTGAATACGAACAGGATAGTA
TTGGTTCTCCTGATGATACGGGGGCGAAGACGAGTGAGGAGCGGGTGGAG
GTTTAG
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Coding sequence (CDS) from alignment at ch1:3369576..3371281-

>KJC3_001307-T1 ID=KJC3_001307-T1|Name=KJC3_001307-T1|organism=Aspergillus niger KJC3|type=CDS|length=3306bp|location=Sequence derived from alignment at ch1:3369576..3371281- (Aspergillus niger KJC3)
GCGGAGTTCTCACCTTCGACTCCTTTCATCGCTCCTTTCGGTATACCGCC
GCCGATGAGACACGAGTTAGTGCTATCGCAGTAGGCGTCCAGCAAGCCTC
TGCGCTGCTTGGTTGCCTGATTATCTGGCCTTTCACAAACCGCCTTGGTC
GTCGCCCGGCCATGGCTGTCTGCTCCCTCATCTTCTGTACGGGGGTCATC
TTCGAGCTCCTCGATACCCACTCGCTATCCGTCTTCTACGTGGGCCGCGT
CATCTGCGGACTGGGGATCGGCGGCTCCGCAACCGTCATCCCCATCTATC
TTTCGGAAATGAGTCCCACCGACAAGCGCGCCCGGCTCGGAAGCTGCTAT
CAGTTCGCCTTCACTATCGGCATCCTCGTCTCCTATTGGATCGACTATGG
CATGCAGTTCGCTCCCGCCAATGCCCTGCAATGGCAGATTCCGTTCGCCG
TACAGCTGATCCCCGGCGCATTCATGGGGTTGGGGATGCTCACGCTCCGC
GAAAGCGTGCGCTGGCTTCTCTCACACGACCACGACAAGAACGAGTCCAA
AGCATGGGACAGCCTAACCTGGATCCGCTCATCGAACGGGCCACACGTGC
GCGCCGAGTACCAGCAAATGAAATCCAGCATCGAGCGTGACGCGCACGCA
ACGGCCGATTTCTCTCCGAGAGAGCTCCTCAGCAAGTCCAACAGCCACCG
ACTCGCTCTAGCCGTTTGCCTGTTCATAGCCCAACAATCCATGGGGCCAA
CCGCGCTGGCCTACTTCGGGCCGCAATTCTTTGCACTTCTCGTAGGCAAC
AACGCCCACCTGACCCTCCTCCTAACCGGCATCTTCGGCGGCCTGAAAGT
AATCGGCTGTCTCATCTTCATCGTATGGGTCGCCGACCGATTCGGCCGCC
GACCACTACTGATCCTGGGCGCGCTCGCTATGTCCATTTGCATGATAACC
ACCTCAGTGGTAGTAAAATCCACCAACGTCCCCACACCCCACCCATCCAC
ACATAACTCCGACACCACCCCCACCATCACCAACAGCGGCCTCCTAACCG
TCTCCCTCATCTACCTCGCCATCGTCTTCTACAACCTCTCCTGGGGCCCC
CTCCCCTGGCCCTGCACCGCCGAACTCTTCAACACGCGCATCCGCGAACC
CGGCGTCGCCATCGCCGTGGCCGCCCAATGGCTCTCCAACTTCGTCTGGT
CATTCTCGACCCCGTACGTCCTAGCAGGTGCCAAATGGGCCACCTTTCTA
ATCTTCGGGATTTTAGACGCCAGCTTCGCTGCTTTCGTCTGGTTCTTCTT
ACCTGAAACGCGCGGCCGAACCCTCGAGGAGATCGATGCGCTTTTCAAAG
ACGAGGATAAGCTCCACGATGACTCACTATCGTCCGCCCTGCTGGTCGGG
GAGCAGGAAATTGACCGTGAATACGAACAGGATAGTATTGGTTCTCCTGA
TGATACGGGGGCGAAGACGAGTGAGGAGCGGGTGGAGGTTTAGATGAGGC
CCTACTCCGAACTCCCCCAGGATGCTGATCTCCACGATCCCAGCCATCAT
GATCCACCGCCGTCCGGCAGCCAGAGCGCCTTTCGCCTTTACTGGCTCAC
GGCAATCGTCTGCTGCGGTGGCCTTCTTTTCGGCTATGACTCGGGTGTGA
TTGGCGGAGTTCTCACCTTCGACTCCTTTCATCGCTCCTTTCGGTATACC
GCCGCCGATGAGACACGAGTTAGTGCTATCGCAGTAGGCGTCCAGCAAGC
CTCTGCGCTGCTTGGTTGCCTGATTATCTGGCCTTTCACAAACCGCCTTG
GTCGTCGCCCGGCCATGGCTGTCTGCTCCCTCATCTTCTGTACGGGGGTC
ATCTTCGAGCTCCTCGATACCCACTCGCTATCCGTCTTCTACGTGGGCCG
CGTCATCTGCGGACTGGGGATCGGCGGCTCCGCAACCGTCATCCCCATCT
ATCTTTCGGAAATGAGTCCCACCGACAAGCGCGCCCGGCTCGGAAGCTGC
TATCAGTTCGCCTTCACTATCGGCATCCTCGTCTCCTATTGGATCGACTA
TGGCATGCAGTTCGCTCCCGCCAATGCCCTGCAATGGCAGATTCCGTTCG
CCGTACAGCTGATCCCCGGCGCATTCATGGGGTTGGGGATGCTCACGCTC
CGCGAAAGCGTGCGCTGGCTTCTCTCACACGACCACGACAAGAACGAGTC
CAAAGCATGGGACAGCCTAACCTGGATCCGCTCATCGAACGGGCCACACG
TGCGCGCCGAGTACCAGCAAATGAAATCCAGCATCGAGCGTGACGCGCAC
GCAACGGCCGATTTCTCTCCGAGAGAGCTCCTCAGCAAGTCCAACAGCCA
CCGACTCGCTCTAGCCGTTTGCCTGTTCATAGCCCAACAATCCATGGGGC
CAACCGCGCTGGCCTACTTCGGGCCGCAATTCTTTGCACTTCTCGTAGGC
AACAACGCCCACCTGACCCTCCTCCTAACCGGCATCTTCGGCGGCCTGAA
AGTAATCGGCTGTCTCATCTTCATCGTATGGGTCGCCGACCGATTCGGCC
GCCGACCACTACTGATCCTGGGCGCGCTCGCTATGTCCATTTGCATGATA
ACCACCTCAGTGGTAGTAAAATCCACCAACGTCCCCACACCCCACCCATC
CACACATAACTCCGACACCACCCCCACCATCACCAACAGCGGCCTCCTAA
CCGTCTCCCTCATCTACCTCGCCATCGTCTTCTACAACCTCTCCTGGGGC
CCCCTCCCCTGGCCCTGCACCGCCGAACTCTTCAACACGCGCATCCGCGA
ACCCGGCGTCGCCATCGCCGTGGCCGCCCAATGGCTCTCCAACTTCGTCT
GGTCATTCTCGACCCCGTACGTCCTAGCAGGTGCCAAATGGGCCACCTTT
CTAATCTTCGGGATTTTAGACGCCAGCTTCGCTGCTTTCGTCTGGTTCTT
CTTACCTGAAACGCGCGGCCGAACCCTCGAGGAGATCGATGCGCTTTTCA
AAGACGAGGATAAGCTCCACGATGACTCACTATCGTCCGCCCTGCTGGTC
GGGGAGCAGGAAATTGACCGTGAATACGAACAGGATAGTATTGGTTCTCC
TGATGATACGGGGGCGAAGACGAGTGAGGAGCGGGTGGAGGTTTAGATGA
GGCCCTACTCCGAACTCCCCCAGGATGCTGATCTCCACGATCCCAGCCAT
CATGATCCACCGCCGTCCGGCAGCCAGAGCGCCTTTCGCCTTTACTGGCT
CACGGCAATCGTCTGCTGCGGTGGCCTTCTTTTCGGCTATGACTCGGGTG
TGATTG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
GO:0016020membrane
Vocabulary: Molecular Function
TermDefinition
GO:0022857transmembrane transporter activity
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_001307KJC3_001307Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001307-T1KJC3_001307-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001307-T1.cdsKJC3_001307-T1.cdsAspergillus niger KJC3CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001307-T1.exon2KJC3_001307-T1.exon2Aspergillus niger KJC3exon
KJC3_001307-T1.exon1KJC3_001307-T1.exon1Aspergillus niger KJC3exon


Properties
Property NameValue
DBxrefInterPro:IPR036259
DBxrefInterPro:IPR020846
DBxrefInterPro:IPR005829
DBxrefInterPro:IPR005828
DBxrefInterPro:IPR003663
DBxrefPFAM:PF00083
DBxrefPFAM:PF07690
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch1supercontigch1:3369576..3371281 -
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